KEGG   Solea senegalensis (Senegalese sole): 122777527
Entry
122777527         CDS       T07721                                 
Symbol
cop1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen04115  p53 signaling pathway
ssen04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122777527 (cop1)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    122777527 (cop1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ssen04121]
    122777527 (cop1)
Enzymes [BR:ssen01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122777527 (cop1)
Ubiquitin system [BR:ssen04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122777527 (cop1)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     122777527 (cop1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 zf-C3HC4_2 Beta-prop_RIG_2nd EIF3I Beta-prop_TEP1_C Beta-prop_WDR19_1st zf-C3HC4 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 zf-RING_2 Beta-prop_DCAF4 Beta-prop_EML zf-RING_UBOX zf-C3HC4_3 zf-RING_5 Beta-prop_WDR90_POC16_2nd RING_XB3-XBAT31 zf-C3HC4_4 WD40_RFWD3 WD40_like Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st zf-RING_10 zf-rbx1 UvrD-helicase Beta-prop_SPT8 zf_C2H2_10 Prok-RING_4 zf-Nse TRAF3_RING Sina_RING
Other DBs
NCBI-GeneID: 122777527
NCBI-ProteinID: XP_043894759
LinkDB
Position
LG1:complement(18330907..18342468)
AA seq 706 aa
MSSNRSQQSAGGASSVPSTSSSSTGGAGGSNAVTSNGNNSGNVVPSRTLAAAGDGGLSSV
PSLAAVPSSRGGFASLGRPSTSSGSRKKSLHQAPLHNGLLNSYEDKSNDFVCPICFEMIE
EAYMTKCGHSFCYRCIRQSLEDSNRCPKCNYIVDNVDQLYPNFLVNELILKQKQRLEEKR
LKLDHPNGSRWNAVQDVLSPDQENLDLANVNLMLELLVQKKKQLEAESQAAQRQILMEFL
KEARRNKREQLEQLQKELNFLEDDIKRVEEMSGLYSPMMEAECTVPNVEAPSPAPSCSSI
IDPPDYSQPPGFGGTPQGKRQTWYNSTLASRRKRLTAHFEDLEQCYFSNKMSRITDEGRN
LNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKI
KVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGFTGQR
SKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSP
TSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVNGEEIVSASTDSQLKLW
NVNKTHCLRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSKTLLTFKFDTVKS
VLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgtcaagcaaccggtcacagcaaagcgctggcggggcgagttctgtgccaagcacaagc
agcagcagcacgggaggcgctgggggcagcaacgccgtcacaagtaatgggaacaattcg
gggaatgttgtacccagccggacccttgcagcagccggcgacggtggcttgtcgtcggtg
ccaagtttggccgccgtgccgtcgtcccggggcgggtttgcttccctgggcagaccctct
acgtcctcgggcagcagaaagaaatccctccatcaagcacctttacacaacggcctgctg
aactcgtacgaagataaaagcaacgattttgtctgtcccatttgcttcgaaatgatagaa
gaggcgtacatgacaaagtgtggacacagtttctgttacaggtgcatccgtcagagcctt
gaggacagcaacagatgtcccaagtgtaactatattgtggataatgtagatcagctttat
ccaaactttctcgtcaatgaactgatcctgaagcagaaacaacggttggaggagaagaga
ctaaaattagatcatcctaatggctccaggtggaatgctgtccaggatgtcttgagtcct
gaccaggagaacttggacttggcaaacgttaatctgatgctggagctcctggttcagaag
aaaaagcagctggaggcggaatctcaagcagctcagagacagatcctcatggagttcctt
aaagaagccagaagaaacaagagagagcaactggagcagctgcagaaagagctcaacttt
cttgaagacgacattaagcgtgttgaggaaatgagcggactgtattctccaatgatggag
gcagagtgcacggtacctaacgtcgaagctccctcaccagcgcccagctgtagtagtatt
attgatccaccagactacagccagcctccaggatttggtggaacaccccagggaaaacga
cagacctggtacaacagcacactggcgtcaagaagaaagaggctgacggctcattttgag
gatctagagcagtgctacttctccaacaaaatgtcacgcatcacagatgaaggcaggaac
ttgaaccaactcgatgatttcatggagtgtttgtccaagttcacgcgctacaactctgtt
cggccgctggcgactctctcctacgctagtgacctctacaacggctccagtattgtctcc
agtattgagtttgaccgtgactgtgactactttgccatcgctggtgtgaccaagaagatc
aaggtgtttgagtacggcactgtgatccaggacgcagtggacatccactaccctgtcaac
gaaatgacctgtaattccaaaatcagctgtatcagctggagcagctatcacaagaacctt
ctggccagcagtgactatgagggaacggtcatcctgtgggatggattcactggccagaga
tccaaagtttatcaggagcatgaaaaaaggtgttggagcgtcgacttcaacctgatggac
cccaagctcttagcctctggttccgatgacgctaaagtgaagttatggtcgactaatctt
gacaactctgtagccagcatcgaggccaaggccaacgtgtgctgcgttaaattcagccca
acctccagatatcatctggccttcggctgtgcagatcactgtgtccactactacgatctc
cgcaacactaagcagccaattatggtgttcaaaggccacaggaaagcggtgtcttatgcc
aagtttgtcaacggagaggaaattgtctctgcttcaacagacagtcagctgaagctgtgg
aacgtcaacaaaacccactgtctgcgctccttcaagggtcacatcaacgagaagaacttt
gtcggcctggcttctaatggagactatgtcgcctgtggcagtgagaacaactccctgtac
ctttactacaaaggactttctaagacgttgttaaccttcaagtttgacacggtgaagagt
gtcctggacaaagacaagaaggaggacgacacaaacgagtttgtcagtgctgtgtgctgg
agggcactgcctgatggagagtctaatgtgctgattgctgcaaacagtcaaggaacaatc
aaggtactcgaactcgtctga

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