Solea senegalensis (Senegalese sole): 122777647
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Entry
122777647 CDS
T07721
Name
(RefSeq) cadherin-4-like
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122777647
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122777647
Cell adhesion molecules [BR:
ssen04515
]
Cadherins
Major cadherins
122777647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
DUF2254
Cadherin_CELSR2_9th
DUF2304
Stevor
Motif
Other DBs
NCBI-GeneID:
122777647
NCBI-ProteinID:
XP_043894934
LinkDB
All DBs
Position
LG11:complement(3731726..3959529)
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AA seq
935 aa
AA seq
DB search
MRTDLALVLTAALLLDTFWRSNGEHVAKGPCRPGFSQSFYSVLISKDVLQGQGVRKDTTV
SSQKVKFDDCMGNEAVVFRSSNPVFTVRTDGSIFAQGDGASLEEPVQFKLTASGPQTHVW
ETVVQLALIDPPTTRQNENEVTKEDGKDTARRDEKSAAFQAPPLVIKFSGSGVNGSRGLR
RQKRDWVIPPINVAENSRGPFPQMLVSIRSDQDQDISIRYSITGVGADQPPNEVFNIDPV
LGKMFVTKPLDREHRSSYHLRAHAVDMNGNQVENPIDLYIFVIDMNDNRPEFKNQIYNGS
VDEGSKPGTYVMHLSAFDADDNTTANGMVRYRILSQTPHSPIPNMFTINSETGDIITVAP
GLDREKVSQYTVIVQATDMEGNLNFGLSNTATAIITVTDINDNPPMLTSRTFSGEVPENR
VGVVVANLTVVDADQPHSPNWNAIYRIISGDPSGHFTIRTDPVTNDGMVTVVKPVDFEMN
RAFMLTVVVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPYFPTNPKHIRFEEGVPAGTS
LTTFSASDPDRLQMQQIIRYAKLNDPADWLSINRTNGQIVTTAILDRESIYVKNNIYEAT
FLATDNGFPAASGTGTLQIYLIDINDNPPALLPKESQICERVNRNINGVNITAADADTDP
NAGPFVFELPNFPATIRRNWTISRISGNYARLGLRYQIYLEPGVYEVPVIVSDSGNPPLS
NKSVIKVKVCPCDENGDCTTLGAVAAAGLGTGAIISILICIIILLCMVLLFVVWIKRREK
ERQTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIISKPPGVRRVDE
RPIIPESQYPIRPVVPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVS
SLNSSSTGDQDYDYLNDWGPRFKKLADMYGGGDED
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgagaactgacttggctctggtcctgacagcagcccttcttctcgacacattctggagg
agtaatggggagcatgttgccaaaggtccctgccgaccgggcttctctcaaagcttctac
tctgtgctgatttcaaaggatgtattgcaaggccagggcgtacgtaaagataccacagta
tcatcacaaaaagtgaagtttgacgactgcatggggaacgaggcggtggttttccgcagc
agcaaccccgtcttcaccgtgcggacagacgggtccatcttcgcccagggtgacggcgct
agcctggaggaaccggtccagtttaaactgacagcgagtggcccacagacacatgtctgg
gagactgtggtgcagctggcactgattgacccgccaacaactcgacaaaatgaaaatgag
gtcacaaaggaagacgggaaagacaccgcgagaagagacgagaagagcgccgcgttccaa
gcgccgcctctcgtcatcaagttctctggctctggcgtgaacggctccagggggctgcgg
aggcagaagagggactgggtgatcccaccaatcaacgtggcggaaaactcccgaggacca
ttccctcagatgctcgtcagcattcgttcagaccaggaccaggacatctcaatccggtac
agcatcactggggtgggagcagatcaaccgcccaatgaggtgttcaatatcgacccggtg
ctcgggaagatgtttgtcaccaaacctcttgaccgagaacatcgctcttcgtaccacttg
cgcgcccatgccgtggacatgaacgggaaccaggttgagaaccccatcgacctgtacatc
ttcgtcatcgacatgaacgacaacaggcccgagttcaaaaaccagatctacaacggctct
gtggacgaaggctccaaaccaggaacgtatgtgatgcacctgtcggcgttcgatgccgac
gacaacaccaccgcgaacggaatggtgcgctatcgaatcctgtcccagacgccgcacagc
cccatccccaacatgttcacgatcaacagtgagacgggggacatcatcacggtggcgccc
ggtcttgaccgagagaaagtgtctcagtataccgtcattgtgcaggccacagacatggaa
ggcaacctgaacttcggcctctccaacacggccaccgccatcatcactgtcacggacatc
aacgacaaccctcccatgctgacctccagaactttttcaggcgaggtcccagagaatcga
gtgggtgttgtggtggcgaacctgacggtggtggacgccgatcaaccgcactcgccgaac
tggaacgcaatctacagaatcatcagcggagacccgtctggacacttcaccatccgcact
gaccctgtcaccaacgatggcatggtcaccgtggttaagcctgtcgactttgagatgaac
cgcgccttcatgttgacagtggtcgtctccaaccaggcccatctagccagtggcatccag
tcttcgctccagtccacggcgggtgtcaccatatccgtccaggacgtcaacgaacccccg
tatttccccacgaatccaaaacacatccgcttcgaggagggcgtccccgccggcaccagc
ctgacgaccttctccgcctcagatcctgaccgactgcagatgcagcagataatcaggtat
gcaaagctgaacgacccggctgactggttgtccatcaacagaaccaacggtcagatagtg
accaccgcgatactcgaccgggagtccatatacgtcaaaaacaatatttatgaagccacg
ttcctggcaacagataatggcttccctgcggccagcggcacaggcacgttgcagatctat
ctcatcgatattaacgacaaccctccagcgctcttacccaaggagtcgcagatctgcgag
cgggtgaacagaaacattaacggtgtcaacatcaccgctgccgacgccgacaccgacccc
aacgctgggcctttcgtcttcgagctccccaacttccccgccaccatccgacgcaactgg
acaatctcccggatcagtggcaactacgcccgactgggcttgcggtaccagatctatttg
gagccgggggtgtatgaggtccctgtgattgtgtccgattcagggaaccctccactgtcc
aataagtcagtcatcaaagtgaaggtgtgtccctgcgatgaaaatggagactgcaccact
ctcggtgcggtcgcagccgcgggcctgggaactggagccattatctccatcctgatctgt
atcatcatactgctttgcatggtgctattgttcgtggtgtggatcaagcgcagagagaag
gagaggcagaccaagcagctgctcatcgaccccgaggacgacgtcagggacaacatcctc
aaatacgacgaagagggaggaggagaagaggaccaggactacgacctcagccagttgcag
cagcccgactccttggagcacatcatcagcaaaccgcctggcgtgcgcagggtggatgag
cgtcccataatccccgagtcccagtatccaattagacctgtcgttccccatcctggagac
atcggggactttatccatgagggtctgcgagcggcagacaacgaccccactgctcctccc
tacgactccctgctggtgtttgactacgagggcagcggctccaccgccggctccgtcagc
tcactcaactcctccagcacaggggaccaggactatgactacctcaatgactggggcccg
cgcttcaagaagctcgccgacatgtacggcggcggggatgaggactaa
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