Solea senegalensis (Senegalese sole): 122777648
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Entry
122777648 CDS
T07721
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122777648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122777648
03036 Chromosome and associated proteins [BR:
ssen03036
]
122777648
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122777648
Coactivators
SAGA/TFTC/STAGA complex
122777648
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122777648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
122777648
NCBI-ProteinID:
XP_043894936
LinkDB
All DBs
Position
LG11:3698510..3710087
Genome browser
AA seq
907 aa
AA seq
DB search
MRSGELLDTPLISRVSAAVGTGVHGGVVNCAGSCSSGMDGAAGTTSPARLSMTAPPSESK
SATASGVFSVGPDGTSCVGKPARTGVQTLNGSVVVTNCHIPADGSSDSNSQSAVTLVNNG
PVSAIKGTAASHCSIIQTPVSSGHNTVTSPVISSQSSVNSVPTVTLVRPPMQTPSNTSHL
TTVLTTAPVTVGSVANSTKTIVQTGAQVVASTVLTGTTATMRSPTVLQNLRTSVPSAIAA
APPGGVRAIAPQVLAPRLTQHHQNAPNAPNIQNIQLPPGMVLVRSESGQLLMIHQQTLAQ
MQAQSQSQNAMTPRPVAPTSTPPVHITSLQAPTASLLTRSVAPTTIIKQATTAQTSVTAT
TQLQRPPVLQNTIMMGGAATTPEQPLGTSTTVQAGSAATTVTARGGPLRTAAPPIAVSAE
TLENVKKCRNFLSTLIKLASNGKQTSETTASVKELVKNLLEGKIEPEDFTGRLYQELHSS
PQPYLVPFLKRSLPALRQMTPDSEAFIQQSLLPQPSTRPAAAASTALTAVVLRPPLSTAA
TAATSTAATKTTVISLTQTPHSKSALIVPQQQGAMARTQMTVTQSPMVTLRGQPQSRIVV
GQQPQVVKQLQTVPAVKQMLAPAAKGGQVISQTLLTAAQRNKLKEAGGTFRDDDDINDVA
SMAGVNLSEESARILATSSELVGTVTRSCKDEAFLSTTLLTRRALEIGKKFGVGELSSDV
INYISHATQQRLQNLLEKVSLAAQQKNINLKEDERAEQVSDVRSQLKFFEQLDQMEKQRK
EEQEREILMKAAKSRSRQEDPEQLRLKQKAKEMQQQELAQIRQREANLTALAAIGPRKKR
KAHSPVRGASAEGSGSGPCPPAGSSGAGSRQFMRQRITRVNLRDLLLCLENERGTSHSHL
LYKGFLK
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcggagagttgttggacactccgttgatttcacgtgtctccgctgctgtagga
actggagtgcacggaggcgtcgtcaactgtgcggggtcctgcagttcaggcatggatgga
gcagccgggacaacatcaccggcgagactgagcatgacagccccgccaagtgagtccaag
tcggcgacggctagcggggtcttttccgtaggaccagatggaacatcttgtgttggaaaa
ccagcaaggactggtgttcagactttaaatggaagtgtcgtggtcacgaactgtcacatt
ccagctgacggtagcagtgacagcaactctcagtcagctgtcacgcttgtaaacaacgga
cctgtttctgcgatcaaaggcaccgcagcatctcactgctctattattcagactccagtc
tcgagtggacataatacggtcacctcgcctgtgatttcgtctcagtcctcagtgaatagt
gttcccacggtcacgctcgtcaggccacctatgcaaactcccagcaacacctcacacctt
accacagtcttaacaacggcacctgtcacggttggatctgttgctaactccacaaagact
atagtgcagactggtgcacaagtcgtcgcttcaactgttttgaccgggacaaccgcgact
atgaggagccccactgtattgcagaacctgaggacttcagtaccgtcagcaatcgctgcc
gctcctcctggtggagttcgagccattgccccacaggtgctggcccctcgacttactcag
catcatcaaaatgccccaaacgctccaaatatccaaaacatccagctgccgccaggcatg
gtcttggttcgtagtgagagtgggcagctgctgatgatacaccagcagaccttggctcag
atgcaggctcagtcgcagtcccaaaacgccatgacgccacgacccgtcgcccccacaagc
actccacctgtgcacatcacttctctacaggctccaactgcatcactgctcactcgttca
gttgcccccaccactattattaaacaagcgaccacagcccaaacctctgtgacagccacc
acacaactgcagaggcctcctgtgttgcagaacaccatcatgatgggaggagctgctacc
accccagaacagccactggggacgtccaccactgtacaggctggatctgcagccactaca
gtaacagcaaggggcgggcccctgaggaccgctgcccctccaatagcagtctcagctgag
acactggagaatgtgaaaaaatgcagaaactttctatccacgctgattaagctggcgtcc
aatggaaaacagacctccgagacgacggccagtgtcaaggagctggtcaaaaatttgctg
gaaggaaagatagagcctgaagatttcaccggtaggttataccaggagctccattcctca
ccacagccataccttgtgcctttcctgaagagaagtctcccagcgctgcgtcagatgact
ccagactctgaggccttcatccagcagagcctcctgcctcagcccagcactcggcctgct
gcggcggcttctacggccctcaccgctgtggtgctgcgacctccgctgtccactgcagcc
actgcagccaccagcaccgctgcaaccaaaaccacagtcatcagcctcactcagacgccg
cacagcaaatcagcactgatcgtgccacaacaacagggggcgatggcgaggacacagatg
acagtaactcagtctcccatggtgacactgagaggacaacctcaaagtcgcatcgttgtg
ggtcagcagccacaggtcgtcaaacagctacagacagttccagctgtgaaacagatgttg
gctccagcggcaaaaggaggacaagtcatcagtcagacccttctcactgctgctcagagg
aacaagctgaaggaagcaggaggaaccttcagggatgatgacgatatcaatgatgtggcc
tccatggcaggagtcaacttgtcggaggagagtgcccgtatcctagcaaccagctctgaa
cttgttggcacggtgactcgttcctgtaaggacgaggccttcctctccaccaccttactc
acccggagagctcttgagatcggtaagaagtttggcgtcggcgagttgagctcggacgtg
atcaactacatttcccacgcgacacagcagcggctccaaaacctgctggagaaggtgtca
ctggcggcccagcagaagaacataaatttgaaggaggacgagcgggccgagcaggtcagc
gacgtgcgaagtcagctcaagttctttgagcaactggatcagatggagaagcaaaggaag
gaggagcaggagcgagagatcctcatgaaagccgccaagtctcggtcacggcaagaggat
cccgagcagctccgactcaaacagaaggccaaagagatgcagcagcaggaactggctcag
atcaggcagagagaggccaacctcacggctctggcggcaatcggcccgaggaaaaagcgg
aaagcgcactctcctgttcgaggtgccagtgcagagggctcaggatcagggccgtgcccg
cctgcaggctccagtggagccggctccagacagtttatgcgacagcgcattaccagagtc
aacctcagggacctgctcctctgcctggagaatgagagagggaccagtcactcacacctg
ctgtataaaggcttcctcaaatag
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