KEGG   Solea senegalensis (Senegalese sole): 122777681
Entry
122777681         CDS       T07721                                 
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03030  DNA replication
ssen03410  Base excision repair
ssen03420  Nucleotide excision repair
ssen03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    122777681 (rfc2)
   03410 Base excision repair
    122777681 (rfc2)
   03420 Nucleotide excision repair
    122777681 (rfc2)
   03430 Mismatch repair
    122777681 (rfc2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssen03032]
    122777681 (rfc2)
   03036 Chromosome and associated proteins [BR:ssen03036]
    122777681 (rfc2)
   03400 DNA repair and recombination proteins [BR:ssen03400]
    122777681 (rfc2)
DNA replication proteins [BR:ssen03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    122777681 (rfc2)
  DNA Replication Termination Factors
   ELG1-RFC complex
    122777681 (rfc2)
Chromosome and associated proteins [BR:ssen03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    122777681 (rfc2)
DNA repair and recombination proteins [BR:ssen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     122777681 (rfc2)
  Check point factors
   HRAD17(Rad24)-RFC complex
    122777681 (rfc2)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 RCF1-5-like_lid AAA_14 AAA_16 Viral_helicase1 Rad17 AAA_24 AAA_11 AAA_19 AAA_5 AAA_assoc_2 DEAD nSTAND3 MipZ Mg_chelatase AAA_18 RuvB_N DNAX_ATPase_lid ABC_tran AAA_30 RNA_helicase AAA_25 AAA_28 AAA_23 NTPase_1 MeaB AAA_2 SLFN-g3_helicase PPR_1 MCM FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 122777681
NCBI-ProteinID: XP_043895013
LinkDB
Position
LG11:complement(23839198..23841797)
AA seq 357 aa
MDVEMAENESEKRPAESGPKAGTEAGEGPSKSSGGSYELPWVEKYRPVKLNQIVGNVETV
SRLEVFTREGNVPNIIIAGPPGTGKTTSILCLARALLGASMKDAVLELNASNDRGIDTVR
NKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKI
IEPIQSRCAVLRYSKLTDGQILARLQDVVEKERLSVSDDGLEAIIFTAQGDMRQALNNLQ
STHSGFGYISSENVFKVCDEPHPLLVKSMLGHCVEGNIDEAYKVVEQLWSLGYSPEDVIG
NIFRVCKTFNMAEFLKLEFIKEIGYTHMRVAEGVNSLLQMAGLLARLCSKTIAPPAS
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggacgtggagatggcggagaatgaaagtgagaagcggccggcggagagcggcccgaag
gcgggcacggaggccggggagggtccgtctaaaagctccggaggctcctatgagctgccg
tgggtggagaagtaccgacccgtgaaactgaatcagatcgtggggaacgtggagacggtg
agccgcctggaggtttttaccagagagggaaacgttcctaacatcatcatagcaggtcct
ccaggaacaggaaagaccaccagcatcctgtgtttggcccgagctctgctgggagcgtcc
atgaaggacgccgtgctggagctgaacgcctccaacgacaggggaatcgacaccgtgagg
aacaagatcaagatgtttgctcagcagaaagtcacgctgcccaaaggacgacacaagatc
atcatcctggatgaagccgacagtatgacagatggagctcagcaggctctccggaggatc
atggagatctactccaagacgactcgcttcgctcttgcctgcaacgcctccgataaaatc
atcgagccgatccagtcgcgctgcgccgtgctgcgttactccaaactgacggacggtcag
atcctcgcgcggctgcaggacgtggtggagaaggaacgtctgtccgtgtccgatgacggg
ctggaggccatcatcttcaccgcccagggagacatgagacaggcgttgaacaacctgcag
tccacacactctggctttggctacatcagcagcgagaatgtgttcaaggtgtgcgacgag
ccacaccccctgctggtgaaaagcatgctgggacactgtgtggagggaaacatcgacgag
gcgtataaggtggtggagcagctgtggtcgctgggctactctccagaggacgtcatcggg
aacatcttcagggtctgtaagaccttcaacatggccgagttcctcaagctggagttcatt
aaggaaatcggttatactcacatgcgtgtggctgaaggcgtgaactctctgctgcagatg
gccggactgctcgctcgactctgcagtaagaccatagcgccccctgccagctga

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