Solea senegalensis (Senegalese sole): 122777681
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Entry
122777681 CDS
T07721
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03030
DNA replication
ssen03410
Base excision repair
ssen03420
Nucleotide excision repair
ssen03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122777681 (rfc2)
03410 Base excision repair
122777681 (rfc2)
03420 Nucleotide excision repair
122777681 (rfc2)
03430 Mismatch repair
122777681 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssen03032
]
122777681 (rfc2)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122777681 (rfc2)
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122777681 (rfc2)
DNA replication proteins [BR:
ssen03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122777681 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
122777681 (rfc2)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122777681 (rfc2)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122777681 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
122777681 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
Viral_helicase1
Rad17
AAA_24
AAA_11
AAA_19
AAA_5
AAA_assoc_2
DEAD
nSTAND3
MipZ
Mg_chelatase
AAA_18
RuvB_N
DNAX_ATPase_lid
ABC_tran
AAA_30
RNA_helicase
AAA_25
AAA_28
AAA_23
NTPase_1
MeaB
AAA_2
SLFN-g3_helicase
PPR_1
MCM
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
122777681
NCBI-ProteinID:
XP_043895013
LinkDB
All DBs
Position
LG11:complement(23839198..23841797)
Genome browser
AA seq
357 aa
AA seq
DB search
MDVEMAENESEKRPAESGPKAGTEAGEGPSKSSGGSYELPWVEKYRPVKLNQIVGNVETV
SRLEVFTREGNVPNIIIAGPPGTGKTTSILCLARALLGASMKDAVLELNASNDRGIDTVR
NKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKI
IEPIQSRCAVLRYSKLTDGQILARLQDVVEKERLSVSDDGLEAIIFTAQGDMRQALNNLQ
STHSGFGYISSENVFKVCDEPHPLLVKSMLGHCVEGNIDEAYKVVEQLWSLGYSPEDVIG
NIFRVCKTFNMAEFLKLEFIKEIGYTHMRVAEGVNSLLQMAGLLARLCSKTIAPPAS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggagatggcggagaatgaaagtgagaagcggccggcggagagcggcccgaag
gcgggcacggaggccggggagggtccgtctaaaagctccggaggctcctatgagctgccg
tgggtggagaagtaccgacccgtgaaactgaatcagatcgtggggaacgtggagacggtg
agccgcctggaggtttttaccagagagggaaacgttcctaacatcatcatagcaggtcct
ccaggaacaggaaagaccaccagcatcctgtgtttggcccgagctctgctgggagcgtcc
atgaaggacgccgtgctggagctgaacgcctccaacgacaggggaatcgacaccgtgagg
aacaagatcaagatgtttgctcagcagaaagtcacgctgcccaaaggacgacacaagatc
atcatcctggatgaagccgacagtatgacagatggagctcagcaggctctccggaggatc
atggagatctactccaagacgactcgcttcgctcttgcctgcaacgcctccgataaaatc
atcgagccgatccagtcgcgctgcgccgtgctgcgttactccaaactgacggacggtcag
atcctcgcgcggctgcaggacgtggtggagaaggaacgtctgtccgtgtccgatgacggg
ctggaggccatcatcttcaccgcccagggagacatgagacaggcgttgaacaacctgcag
tccacacactctggctttggctacatcagcagcgagaatgtgttcaaggtgtgcgacgag
ccacaccccctgctggtgaaaagcatgctgggacactgtgtggagggaaacatcgacgag
gcgtataaggtggtggagcagctgtggtcgctgggctactctccagaggacgtcatcggg
aacatcttcagggtctgtaagaccttcaacatggccgagttcctcaagctggagttcatt
aaggaaatcggttatactcacatgcgtgtggctgaaggcgtgaactctctgctgcagatg
gccggactgctcgctcgactctgcagtaagaccatagcgccccctgccagctga
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