Solea senegalensis (Senegalese sole): 122777880
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Entry
122777880 CDS
T07721
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122777880 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ssen03310
]
122777880 (rarga)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122777880 (rarga)
Nuclear receptors [BR:
ssen03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
122777880 (rarga)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PRIMA1
Motif
Other DBs
NCBI-GeneID:
122777880
NCBI-ProteinID:
XP_043895339
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Position
LG11:complement(10345095..10390510)
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AA seq
509 aa
AA seq
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MATNREQQVGHMTGFPPAVYPFAFNSMRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSG
ELEELVNKVSKAHQETCPSLCQLGKYTTNSSAEHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFSFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
QTECNDSPPPPLPPPPPPAAPVLKQEAEDEDDSWATENNSEPSPEEEDEDDDDDVGDEER
DRGSDSDGESWGVLDAIDGSRKGLFGRAQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacagggaacagcaggtgggacacatgacaggctttccacctgccgtgtac
cccttcgccttcaactccatgagaagccactccccctttgacctgttggccaacagcagc
ctgtttgggagatttggtgctgacctgcccaaagagatggccgctctctcggtggagacc
cagagcaccagctcagaggagatggtacccagttctccgtctccacctcccccacctcgt
gtctacaaaccctgttttgtgtgccaggacaagtcctcggggtaccactacggggtcagc
tcctgtgagggctgtaagggttttttccgccgcagtatccagaagaacatggtgtacacc
tgccacagagacaaaaactgtcagattaacaaggtcacacgcaaccgctgccagtactgc
aggctgcagaaatgcttcgaggtcggcatgtccaaggaagcggtgcgtaatgaccgaaac
aagaagaagaaggatgtgaaggaggaggtggtgcttcctgagagctatgagctaagcgga
gagttagaggagttggtcaataaagtcagcaaagctcaccaagaaacctgcccgtcactt
tgccagttgggcaaatacaccaccaactccagtgcagagcaccgtgtccagctggatctg
ggtctatgggacaagttcagtgagctgtccaccaaatgcatcatcaagattgtggaattt
gccaaacggctgccaggattcaccaccctcaccatcgcagatcagatcactctacttaag
tcagcctgcttggacatactgatgctgaggatctgtacacgctacaccccagagcaggac
actatgaccttctcagatggtctgactctgaaccggactcagatgcacaatgctggcttt
ggaccactcacagatttggtgttttcctttgctggccaacttctgcctctggaaatggac
gacacagaaactggcctcctcagtgccatctgcctcatctgtggagaccgtatggatcta
gaagagccccagaaggtggataaactacaagagcctctacttgaggctctgaagatctat
gctcgccgccgtcgtcccaataaaccccacatgttcccccgtatgctgatgaagattact
gacctcagaggcatcagcaccaagggtgctgagagagccatcactctgaaaatggagatc
ccggggcccatgcctcctttgatcagggagatgcttgagaaccccgaagcttttgaagac
caaacagagtgcaacgacagcccgccgcctccgctgccgccgccgcctccaccagcagca
ccggtcctgaagcaggaagccgaggacgaggacgacagctgggccacagaaaacaacagc
gagccttcaccagaagaggaggacgaggacgatgacgacgatgtgggagatgaagagcga
gacagaggctcggacagtgacggggagtcctggggggttctggatgccatagatgggtcg
aggaaaggcctttttgggagggcccagtga
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