Solea senegalensis (Senegalese sole): 122777974
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Entry
122777974 CDS
T07721
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04120
Ubiquitin mediated proteolysis
ssen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122777974 (syvn1)
04120 Ubiquitin mediated proteolysis
122777974 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122777974 (syvn1)
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122777974 (syvn1)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122777974 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
FANCL_C
Motif
Other DBs
NCBI-GeneID:
122777974
NCBI-ProteinID:
XP_043895390
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All DBs
Position
LG12:complement(14802841..14812043)
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AA seq
632 aa
AA seq
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MVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLMGLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTIFIKYILHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAQAPPPAPAAPANAA
AVPPVNVAPGMLPAFPPGMFPFWGPFPAVPPPPPAAAAAEAPGATDAPQSSRDATHAAGT
SQPTSSTADTSTAAAAPGAAIPGFPFSFPPPFPTAPWLPMPPPPFVSSMPPPPPSLSRMS
EEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPQPEGSTGEASG
TNPTASSSAAGSCSESAAQVEEEESTSFVEVNGAAVSSQPADSTSTASETERHEIMNEEV
AAGEDGEPNTAELRRRRLRKLESSSSPPPPEN
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggtacgagctgctttggtgactgccaccagtctggcactgactggggcagtggtggca
catgcttacctcctcaaacaccaattctacccaactgtggtctacctcacaaagagcagc
ccgagcatggcggtgttgtacatccaagcctttgtgttggtgtttctgctgggaaagttc
atgagaaaggtcttttttggacagctaagggctgcagaaatggagcatctcatcgagcgc
tcctggtatgcggtcactgagacatgcctggccttcactgtgttcagggatgacttctcc
cctcgcttcgtcgcactcttcactcttctgctcttccttaagtgcttccactggctggct
gaggaccgtgtggactttatggaacggagtcctaacatctcctggatctttcactttaga
gtgttgtctctcatgggactgcttggtgtccttgacttcctgttcgtcaaccatgcatgt
cacagcatcataactagaggagcctcagtccagcttgtattcggatttgagtatgccatc
ctgatgaccatggtgctgaccatcttcatcaagtacattctgcacacagtcgacctgcag
agtgagaatccctgggataacaaggctgtctacatgctctacactgagctcttcacaggt
tttatcaaagtgctgctgtatattgccttcatgaccatcatgataaaggtccacaccttc
cccttgtttgccattcgccccatgtatctggctatgaggcaattcaagaaagctgtaaca
gatgctataatgtctcggagggctatccgcaacatgaatacattataccctgatgcaact
cctgaagatctgctggcttctgacaatgtctgtatcatctgccgggaggaaatggtcact
ggagccaagaaactaccctgtaatcacattttccactccagctgtttgcgctcctggttc
cagagacagcagacctgtcctacctgtcgcatggacgtcctgcgggcttcaaataataat
cagactcctgccccagctcaggctccaccccctgctccagcagcacctgccaatgcagca
gcagtccctcctgttaatgtggctccaggcatgttgccagcttttcctcctggcatgttc
cctttctggggtcccttccctgcagtgcctcctcctcctcctgctgctgctgcagctgaa
gctcctggtgctactgatgctccacaaagcagcagagacgccacacacgcagctggtacc
agccaacccacatcgtctactgcagacacctccactgcagcagctgctccaggagccgca
atcccaggcttccccttctctttccctcctcccttccccactgcaccatggctgcccatg
ccaccgcctccctttgtgtcatcaatgcctccccctccgccgtctctgtcccgaatgtct
gaggaggagctgagggagctggaggctgaaggtcggcgtggccttgaggccagactccag
tgtctccaaaacatccacactctgcttgatgccgccatgctgaacatccaccactacctc
agcaccgttgccacactaactcctcctcagcctgaaggcagcactggagaagcaagcggg
acaaaccccacagcttcgtcctctgcagctggcagctgctctgagagtgcggcccaggtg
gaggaggaggaatctaccagctttgttgaagtgaatggtgctgcagtgtcttctcagcct
gctgattccacctccactgcctcagagacagaaagacatgaaataatgaatgaagaagtg
gcggcaggcgaggatggagaaccaaacactgccgagctgagacgccgtcgcctccgtaag
ctggaatcatcgtcatctccaccccctccagaaaactga
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