Solea senegalensis (Senegalese sole): 122778017
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Entry
122778017 CDS
T07721
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122778017 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122778017 (pitx2)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
122778017 (pitx2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
AATF-Che1
Auxin_canalis
Motif
Other DBs
NCBI-GeneID:
122778017
NCBI-ProteinID:
XP_043895462
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Position
LG12:3139334..3191364
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AA seq
315 aa
AA seq
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MNSMRDPLNTDHPHHLTGNNKLASTHYTALAMASSLQPLQRSVDSKHRVDVHTVSDTSSP
ESVEKEKTQNKNDDSSDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV
WTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYEDMYPSYTYNNWA
AKGLTSASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMTSSMVPSAVTGVPGSSLNSL
NNLNNLSNPSLNSGVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNP
GSNLSACQYAVDRPV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaactctatgagggatccattaaacacagaccatccccaccacctcacagggaataat
aaacttgcctccacgcactacacggctctggcgatggcctccagcttacagccgctgcag
cggtctgtggactctaaacaccgggtagacgtgcacaccgtgtcggacacgtccagtccg
gagtccgtcgagaaagaaaagacccagaataaaaacgacgactcctcggatgacccgtct
aaaaagaagcggcagcggcgacagaggactcacttcaccagccaacagctgcaggaactg
gaggccactttccagcggaatcgttatccggacatgagcacgagggaggagatagccgtg
tggaccaacctcacagaggcccgggtcagggtttggttcaagaaccggcgagccaagtgg
aggaaacgggaaagaaaccaacaagccgagctctgcaaaaacggtttcgggccgcagttc
aacggactcatgcagccctacgaagacatgtacccgagctacacgtacaacaactgggcc
gccaagggcctcacgtcggcctcactatccaccaaaagcttccccttcttcaactccatg
aacgtcaaccccttgtcctcgcagaccatgttctcgccgccgaactccatatcctccatg
acttccagcatggtgccgtcggcggtcacgggcgtgccgggctccagcctcaacagcctc
aacaacttgaacaacctcagtaacccgtctctcaactccggggtgcccacgccggcgtgt
ccctacgcgccgccgaccccgccatacgtgtacagggacacttgtaactccagcctggcc
agcctgagactgaaagccaagcagcactcgagctttggatacgccagtgtgcagaacccg
gggtctaatctgagcgcctgccagtacgccgtggacagaccagtctaa
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