Solea senegalensis (Senegalese sole): 122778022
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Entry
122778022 CDS
T07721
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03420
Nucleotide excision repair
ssen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122778022 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
122778022 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122778022 (cul4b)
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122778022 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122778022 (cul4b)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
122778022 (cul4b)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
122778022 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
122778022 (cul4b)
Exosome [BR:
ssen04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122778022 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
122778022
NCBI-ProteinID:
XP_043895473
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Position
LG12:9060104..9070961
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AA seq
863 aa
AA seq
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MFPTGLSSPNPPPPPTQEARPAATDVKTDSGNITSPKKRKINGSEREDAADTISPSPPKT
LNSPSPSSSPNPIHIQKKLRFDDSVDFIGLDVKMAEEAAAAAASCSNNKSSKAMFLPGGA
GHHANGLTKTAASGTFSNNKPGAAKKLVIKNFKEKPKLPENYTQETWQKLKEAVEAIQNS
TSIKYNLEELYQAVENLCSHKISAKLYKQLRAVCEDHIKAQIDQFREDALDSVLFLKKID
KCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGI
LLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREV
PEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTATLQKGLTHLLDENRI
QDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHII
DICFMKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKI
MIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFK
DMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPAEMVRLQEIFKT
FYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFTLEEIKLA
TGIEDSELRRTLQSLACGKARVLTKLPKSKDIEDGDKFSCNNDFKHKLFRIKINQIQMKE
TVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPVKPADLKKRI
ESLIDRDYMERDKENSNQYNYVA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttatcttcccctaaccccccaccaccgccaacccaggaggcaaga
ccagcagccactgatgtcaaaaccgacagcggtaacatcacatctccgaagaagaggaaa
ataaacggctctgagagggaagacgccgctgacaccatctccccctcgcctcccaagacc
ctgaattccccttctccctcctcctctcccaatccgatacacatccagaagaagttgagg
tttgacgactcagtggatttcattggactggatgtgaaaatggctgaggaggctgccgca
gcggctgcgtcttgctcgaacaacaagagcagcaaagccatgttcctgcccggcggcgcg
gggcaccacgcaaacggactgacgaagaccgcagcctctggcactttctccaacaataaa
cccggcgctgccaagaaactagtcatcaagaacttcaaagaaaaacccaagttacctgag
aactacacgcaggagacctggcagaagctgaaggaggcggtggaggccatacagaacagc
acgtcaatcaagtacaatctagaggagctctatcaggctgtcgagaacctctgctcacat
aagatttctgccaagctttacaaacagctgcgggctgtgtgtgaagaccacatcaaagca
cagattgatcaattcagagaggatgccctggacagtgtgcttttcctcaagaaaattgac
aagtgttggcaagatcactgcagacaaatgatcatgattaggagtatatttttgtttttg
gaccgcacctatgttttacaaaattcaatgctaccatcaatctgggacatgggtctggag
ctgttcaggttctacatcatcagtgacctgaaggtccagagtaaaaccatcgacgggatt
ctgctgctcattgagagggagcggaacggagaggcgatagaccgcagtctgctgaggagc
ctgctgagcatgctctctgacctgcagatttatcaagactcctttgagcaaagatttttg
gaagaaaccaatcgcctgtatgctgcagagggacagaggctgatgcaggagagagaggta
ccagaatatcttcatcatgtcaacaaacgtttggaggaggaggcagacagagtcatcaca
tatctcgatcagagcacacaaaagccgctcattgctactgtggagaagcagttacttggt
gaacatctaactgcaacactgcagaaagggctgactcatttgctggacgagaacagaatt
caggatctgtctcttctctatcagctctttagtcgagtgcgaggtggtgttcaggttcta
ctgcagcactggatagagtacataaaggcttttggaagcacaatcgtaatcaatcccgaa
aaagacaaaacaatggttcaggagctgctggacttcaaagacaaggtggatcacatcatc
gacatctgcttcatgaagaacgagaagtttgtcaatgccatgaaggaggcgtttgaaaca
ttcatcaacaaacggccaaataaacctgcggagctcattgcaaaacatgtggattcaaaa
ctaagggcaggaaacaaagaggcaacagatgaagaactagagaagatgcttgataagatt
atgattatctttagattcatctatgggaaggacgtgtttgaggccttttataaaaaggat
ctagccaaaaggttgctggtcgggaaaagcgcatccgttgacgctgaaaagtcaatgttg
tcaaagctgaaacatgaatgtggagcagcattcaccagcaaactggaggggatgttcaaa
gatatggagctttctaaagacatcatggtgcagttcaaacagtacatgcagtgccaaaac
attcctggcaacattgagctgactgtcaacatcctcactatgggttactggccaacctat
gtcccaatggaagtgcacctgcctgctgagatggtgcgactgcaagagatcttcaagact
ttctacctgggcaaacacagtggcaggaagctgcagtggcaatcgacactaggccattgt
gttctaaaagctgaatttaaggagggcaagaaggagctgcaggtatcacttttccaaaca
cttgttctactaatgtttaatgaaggagaggagttcaccttggaggagatcaaactggca
acaggaatagaggacagtgaactgcgtcggactctgcagtcactcgcttgtggaaaagcg
cgggttctcaccaaactccctaaaagcaaagacatagaggacggtgacaagttttcctgc
aacaatgactttaaacacaagctcttcaggatcaaaataaaccaaatccagatgaaagaa
acggtggaggagcaagccagcaccacagagagagtcttccaagatcgtcagtatcagata
gatgctgccattgtgaggattatgaagatgaggaagactctgagccataatctcttgatg
tctgaggtgtacaaccagctcaagttccctgtgaagcctgctgacttgaagaagaggata
gagtctcttattgacagggactatatggagcgtgacaaggagaactccaaccagtacaac
tatgtggcttaa
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