Solea senegalensis (Senegalese sole): 122778033
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Entry
122778033 CDS
T07721
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin beta-15 isoform X1
KO
K16499
protocadherin delta 2
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122778033 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
ssen04515
]
Cadherins
Protocadherins
122778033 (si:ch73-233f7.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
122778033
NCBI-ProteinID:
XP_043895518
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All DBs
Position
LG12:complement(10851048..10857591)
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AA seq
1006 aa
AA seq
DB search
MDHRLSRGSWVPVTGLVICLLLCACVVDLVLAQIRYSIPEELEHGAFVGNIAEDLGLDVA
KLSARRFRIVSGANKQYLEVNLENGILFVNEKMDREELCERSPSCFLHLQVVIENPLELY
RVEVEILDVNDNSPSFPWSEFNLDITESAAPGSCFPLESAQDQDVGTNSLRSYQLSANEH
FILNIQTRNDGSKFAELVLDTPLDREQQKRHEMVLTAFDGGSPERSGTALITIIVLDAND
NVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGSNGEVTYAFSGHAPLKVRELFSVDP
YTGEIRVKGIVDYEKASVYELYVQAKDRGPSAVAVHSKVLVDILDINDNAPEVILTSVST
PVQEDAPPGTVIAVISVMDRDSGENGNVDCQIPSNVPFQLHSSFKNYYTLVTSEFLDRET
VSEYNITLTARDLGSPSLSTRKTILVQVSDINDNPPRFSQPSYTVYVTENNAPGASICTV
TAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQILVQA
QDAGFPPLASNVTVHVFVLDQNDNAPVIVSPLPKNGTVATEVVPRSVDAGYLVTKITALD
ADGGQNSRLSYQVLHATDPGLFSVALYTGEIRTIRRLVERDATRQRLVILVKDNGQPPLS
ATVSIVLTVVDSVPESLSDFGDLALSPQPPSNLAIYLIVSLSTISLIFLVAIIVLAGVKC
YKDRETLSGYNLPPFACCCCGGFQPEPPPEVFKKSNLNLQISSAAKVPTNCMEVNGNSSL
SQSYCYKVCLTPESAKSDFMFLKPCSPSGTPRNNEAKSGENSWNAKSRSASVNNGATTPN
ELKQANTDWTLTKNQNSSIKSYNSINMDGTLMRKAMHADPENYVTSMAPGQYWTWGTHMR
GVKEYKMPPSTSGVTPRPWTPRCTPPPQQQQPSVPSHPHPHPHPPPDYHHNVYIPGTPSG
FCTLRPTAQRSELDVHNSFSTFGKKRRLQMSPQGEAAIINNDLYND
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggatcacagactctccagaggcagctgggtgccagtgactggactggtgatatgtctg
cttctgtgtgcgtgtgtagtggatctggttcttgcacaaattcggtactcgattcccgaa
gagctggagcacggagcttttgttggaaacatcgcagaagacctgggcttggatgtagcc
aagctgtcagcccgtcggtttcgtatagtctccggcgcaaacaaacaatatttagaggtg
aacttggagaatggcattcttttcgtcaacgaaaaaatggacagagaggagctgtgtgaa
cgaagcccgagctgttttttacacttacaagtggttattgaaaatccattagaactttac
agagtggaagtggagattttagatgtgaatgacaactctcctagtttcccatggagcgag
tttaatcttgacatcacagaatcggctgcgccgggctcttgtttccctttagagagcgca
caggaccaggatgtgggcaccaactctctgcgctcctaccagctaagcgcaaacgagcac
ttcatactgaatatccagacgcgcaatgatggcagcaagtttgcggagctcgtgctggac
acgccactggaccgagaacagcagaaaaggcatgaaatggttctgacagcctttgacggc
gggtcgccagaacgctctggtacagcattaataactattatagtgcttgacgcaaacgat
aacgtgcccgtgtttgaccgctcagtttaccgcgcgagcctggtggagaacgcaccgagg
gggacgctggtgctgaagctaaacgccacagacctggatgagggatccaatggagaggtg
acctacgcgttcagcgggcacgcgccactgaaggtgcgagaactattcagcgtggacccg
tatacgggtgaaatcagagtgaagggcattgtggactatgagaaagccagtgtatatgag
ctctatgtgcaggctaaagacagggggccgtcagctgtggcagtacacagtaaagtactg
gtagacatcctggatattaatgacaacgcgcccgaagtcatcctcacatcggtgtccact
cctgtccaagaagacgcgccaccgggcacggtgatagctgtcatcagtgtcatggaccgt
gattcgggagagaacggaaacgttgattgccaaattccgagcaacgttccctttcagctc
cactcatcatttaaaaactattatactttggtgacaagcgagtttctggacagagaaact
gtgtccgagtataacatcaccctcacagctcgcgacttgggctctccttcgctctccacc
aggaaaaccatcctcgttcaagtgtctgacattaacgacaaccccccgcgcttctctcaa
ccttcatacacggtttatgtgactgagaataatgccccgggcgcttccatttgcacagtc
actgcattcgaccccgattctaaccagaacgcatatctgtcttattctattcttgagggt
cagattcagggcatgcccgtgtccacttatgtctccatcaactctgacaacggcaacatc
tacgcactgcgctcttttgattatgagcaacttagaaactttcagattctggtccaggcg
caggacgctggtttccccccactcgccagtaatgtcacagtccatgtctttgtcttggac
cagaatgataatgcacctgttatcgtatccccgctgcccaaaaatggcacagtggccaca
gaggtggttccacggtcagtagatgctgggtatcttgttaccaaaataacagcattagac
gcagacggaggacaaaactcccggctgtcatatcaagtattgcatgcaacagacccagga
ctttttagtgtggctctgtacacgggcgaaatcaggactattcgccggttagtggaaaga
gacgcaacaaggcaaagactggtgatattagtgaaggacaacgggcagccgccgctctct
gccaccgtctccattgtgctcactgtggtagacagcgtgcctgagtcgctgtcagatttc
ggagacctcgctctcagcccacagcccccctcaaacctcgccatctatttgatcgtgtca
ctgagcacaatatctctaatattcctcgtggctattatcgtactggctggggtgaagtgt
tacaaggacagggagaccctcagcgggtacaacctgcctccgttcgcctgctgctgttgc
ggtgggtttcagcctgagccgcccccggaggtgttcaaaaaatccaacctcaacctgcag
atttcatccgcggccaaagtgcccacgaactgtatggaggtgaatggaaatagcagtctc
tcacagtcatattgttataaagtgtgcctgacccccgaatctgcaaaaagtgactttatg
tttctgaagccgtgcagccccagcggcacaccgagaaacaacgaggcgaagagcggagaa
aactcatggaacgcaaagagcaggagcgcatctgtgaacaacggagcaactactccaaat
gagctgaagcaggcaaacacagactggactctgacaaaaaatcaaaactcctccattaaa
agttacaactctatcaacatggatggcacccttatgcgcaaagccatgcatgcagaccca
gaaaactatgtcacctccatggcacctggacagtactggacctggggaactcacatgaga
ggcgtgaaagaatataagatgcctccttcaaccagcggggtcacccctcgcccctggact
ccacgctgcacacctcctccccagcagcagcagccatcagtcccctcccaccctcaccct
cacccacacccaccacccgactaccaccacaacgtgtatatccccgggacaccatcgggc
ttctgcaccctgaggcccactgcacagcgaagtgagctggacgtccacaattcattttct
acgtttggcaagaagcggcgtctccagatgtccccccagggagaggctgctattataaat
aatgacttgtacaatgactga
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