Solea senegalensis (Senegalese sole): 122778299
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Entry
122778299 CDS
T07721
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38-like isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122778299
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122778299
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122778299
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_11
zf-RING_2
zf-C3HC4_2
zf-C3HC4
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
122778299
NCBI-ProteinID:
XP_043895966
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All DBs
Position
LG12:8626774..8643834
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AA seq
670 aa
AA seq
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MDPPRTRSRSRSGFYHFGMNGGGGNSGGGSNVGTGSLMSASGGGVSYPQQSNSGWAPHHG
GRSYSESQQQQQQHTQGSYMSAGAQRHSSLGAHRHPGAGGVLHFHPDSVCNDDGDKMEDS
PSPKRQRLSQQSMLDLSSAPPSTPSSPIRPWELPPSRRPHPHYIPERCHTPVRNRRSPPV
RRQRGRRDRLTRHHHHHHAHNNHHHYNSSNNNHHHHHHHHHHHHPNAHHHHHHHHLHSHH
GPSSAHQDENYRHPAPPQGFPPYSQQPPRGPGPDERSGYHPANPSPRPLHQSPNLSPRLL
HPAAHPHPHPHPSQQQNSVVLDIHEQGSVPVSYPVSPAGAPPGLPPRSAPQQIPACSVVF
SGQHYPVCSVPPPVLQTCSVQHLPMPYPFPSLLSSDPAFLLPPPHLPHPTHLSHHPPHLP
QPGQFGPYPTQQARSPLQRIENDVELLGEHLSLGAGIHYPPATHPALTPHSTQLHFLSHD
PLPQEFFGVSYPNFIPRRLPGRRYRSQQPLPPSPYHPSLLPYFLSMLPVQPTGPAISLEL
DVDDGEVENYEALLNLAERLGEAKLRGLTKGDIEQLPSYRFNPNNHQSEQTLCVVCMSDF
ESRQLLRVLPCSHEFHGKCVDKWLRVSTHCTVSPPGAELFKSKCKSLFFGGLSVQAVPLL
RSQFLRTMFT
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaccccccgaggactcggtcgcggtctcggtctggcttctatcatttcggcatgaac
ggcggtggagggaacagtggcggtggtagcaatgtcggtaccggcagcttgatgagcgcc
agcggaggaggggtgagctacccgcagcagagcaactctggctgggctccccaccacggt
ggccgtagctactccgagagccagcagcagcagcagcagcacacacaggggagctacatg
tccgcaggggctcaacgccactcttcgctcggagcccacagacaccccggggccggagga
gtgctacattttcatccagacagtgtgtgcaatgacgatggggacaaaatggaagacagc
ccaagccccaagaggcagcgtctttcccagcagtccatgttagatctgagctctgcacct
ccctccactccatcctctcccatacgcccatgggagctacctcccagtcgcagaccacac
ccccactacataccagagagatgccacacacctgtccgaaaccgtcgcagccctccagtg
agacgacagcgaggccggagagatcgactgactcgccaccaccaccaccaccacgctcac
aacaaccaccatcactacaacagcagcaacaacaaccaccaccaccaccaccaccaccac
caccatcatcaccccaacgcccaccatcatcatcaccaccaccacctgcattcccaccat
ggtccatcctcagcccaccaggatgaaaactaccgtcatccagctccacctcagggcttc
ccaccttacagccagcagccaccccgagggccagggcctgacgagcgctcaggataccac
cctgcaaacccttcccccaggcccctccaccaatcaccaaatctgtctcccaggctgctg
caccctgcagcccatccacacccacaccctcacccgtcccagcaacagaacagtgtggtg
ctagacatccatgaacagggttccgttccagtatcatatcctgtgtctcctgcgggggcc
ccacctggcctgccgcctcgttctgcccctcagcagatcccagcgtgctctgtggttttt
agtggacagcactaccccgtttgcagcgtccctcctcctgtccttcaaacgtgttcggtt
caacacttaccaatgccctaccccttcccatcattgctgtccagtgacccagcctttctg
ctcccccctcctcacctcccccacccaacacatctttcgcaccacccacctcatttgcca
cagcctggacagtttggaccctatcccacacagcaggcaagatcgccattacagaggata
gaaaatgatgtggagctacttggggagcatctatctttgggtgctgggatccactatcca
cctgctacccacccagcccttaccccacactccacacaacttcacttcctctcccatgac
cccttaccacaggagttctttggagtgtcctatccaaacttcattcctcgacgtctccct
gggcgacggtatcgttcacaacagccactgccaccttcgccttaccaccccagcctcctg
ccttacttcctttcaatgctgccagtccagcccacaggtcctgcgatcagcttagagctg
gatgttgacgatggagaggtggaaaactatgaggccctcctgaacctcgcagagcgcctg
ggagaggccaaactcagaggactgaccaagggagacattgaacagcttccctcctatcgg
ttcaatccaaataaccatcagtctgagcaaacattatgtgtggtatgtatgagtgatttt
gagtcccgccagctgctgcgagtcctgccttgcagccacgagttccacgggaagtgtgtt
gacaaatggctgagggtaagtacacactgcactgtttctcctcctggggctgaacttttc
aagtcaaagtgtaagtctctattttttggggggttaagtgtccaggcagtgccacttttg
cggtctcagtttttaagaaccatgttcacttga
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