Solea senegalensis (Senegalese sole): 122778300
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Entry
122778300 CDS
T07721
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like isoform X1
KO
K12597
protein AIR1/2
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122778300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122778300
03016 Transfer RNA biogenesis [BR:
ssen03016
]
122778300
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
122778300
Transfer RNA biogenesis [BR:
ssen03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
122778300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
122778300
NCBI-ProteinID:
XP_043895968
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All DBs
Position
LG12:8619275..8626188
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AA seq
483 aa
AA seq
DB search
MDIIKVEKDGDREEATYVESYCSSDDGDGPINSIDQKHQISCKQAPQLSRDNSPPLLLAF
SITRGRALQDSSPSSTSSPAFSQEEDCEQPVEDWMILGGEEQEGDSSIQLNLGYWSSSED
ESVVKDPVMKTFTDTWAVLEKDKCGPNRSLTSRYFMPGRDVICNICNRTGHGAKSCYYQK
QKYPTCVLCGIKGHIQRDCPSRPCPSCGLPSHGLRPCEKPPVWNQLCWRCGMTGHLSDTC
PDTWRQYHKTIRLEVPLRPQRTHTLKYKRCFAHCYNCSKRGHYGFECTKRRMVSGTFPSL
PYVCHYDTIADTLHYCTKTQNETKELVGLGSTHPSDQQHLTEPSGQNQPVHGRSRAKLET
CSRAAKRKTWPERRRERQQVKKIRREAQARREGGLLKRPCGNSDDEACHVDPFKSPCHGH
CQATPPPQKRKMDEVGGKRSKKSREAERWKRRGGMKRGDLYPHVDIGSENLLSPKQRVRH
RRR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggatatcatcaaagtcgagaaggatggtgacagggaggaggccacttatgttgagagc
tactgtagttcagatgatggagatggaccgatcaattcaattgatcagaaacaccagatt
agctgtaaacaagctccacagctcagcagggacaattctcctccacttcttctggccttc
tccatcacccgtgggcgggctctgcaggacagcagccccagctcgacttcttctcctgcc
ttctcacaggaggaggactgtgagcagcctgtggaagattggatgatcctgggaggagag
gagcaagagggagactcgagcattcagctgaatctgggatactggagcagctctgaagat
gagtctgtagttaaagatccagttatgaagacatttacagatacatgggctgtattagag
aaagacaagtgtggtcctaatcggtctctgaccagccgctactttatgcctggtcgtgat
gtgatctgtaacatctgcaacaggacaggacatggtgctaaaagctgctactaccaaaag
cagaaatatccaacgtgtgtcctatgtgggatcaagggccacatccagagggactgtcca
agtcgcccatgccctagctgtgggctgccttcacatggcctcaggccctgtgagaagccc
ccagtgtggaaccagctctgctggcgttgtgggatgacaggacacctttctgatacctgc
ccagatacatggcgacagtatcacaagacgatccggttagaggttcctcttaggccacag
agaacccacaccctcaaatataagagatgctttgctcattgttacaattgctctaagagg
gggcattatggctttgagtgcactaagaggaggatggtcagtggaactttcccttcattg
ccttatgtttgccactatgacaccattgcagacaccctccactattgtaccaagacgcaa
aatgaaacaaaagagcttgtgggcctgggatccacacacccttcagaccaacagcacttg
actgaaccatcaggtcagaatcagccagtccacgggaggagccgcgcaaaactggagaca
tgtagccgagctgccaagaggaagacatggcctgagagacgaagagagagacagcaggtg
aagaaaatcaggagagaagctcaagcccgacgtgagggaggactactgaagaggccttgc
ggcaattctgatgatgaagcatgccatgtagaccccttcaagtcaccttgtcatggccac
tgccaggccacaccccctccacagaagagaaagatggatgaggtgggtggtaaaaggagc
aagaaaagcagagaggcagagaggtggaagaggagaggagggatgaaacgtggggatttg
tatcctcatgtagacatcggaagtgaaaaccttctctccccaaagcaaagagtacgtcac
agaagaagataa
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integrated database retrieval system
