Solea senegalensis (Senegalese sole): 122778340
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Entry
122778340 CDS
T07721
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122778340 (rlim)
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122778340 (rlim)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122778340 (rlim)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
122778340
NCBI-ProteinID:
XP_043896041
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Position
LG12:7400426..7407098
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AA seq
686 aa
AA seq
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MEGSDSMEQGGSGQSESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELFNRLQQIKDGPEQQNSNPSTETGEEPVVQPENPEDPANGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQESPEGQEVAANAEP
QVPMETEVVEEPVVEELAVIVETEPELEEVVSQEILEESPSSPAPAPIQPPLSPSPRRGQ
RRPRSHSPEPRRTRARAARSRSPLSLDQLDGLGNARQAHTSQGSNTATTSPPVPQMEGSS
RTRQHVLTRQSTADSDVQPPRASSESVPEVHNVEPQEGEGGGGEGGGEGGGEGGAAGRRP
PTIMFDLQVRRVHPGEYWQRDSIASRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVR
TYVSTIRIPIRRISDAGLGEATSIALQSMIRQIMTGFGELGYLMDSHSDSSDSNRGASTP
TDLGETLNNPDAAAAAVAAATAAAAAAAAAAPAPAAAAPTAAAPVAAAPAAPAAAAPVAD
VGGSPVAAGVTARTVEPDVVEALATGPPASGGRARSRPPVSLEEPSSLPFLRLAHFFLLN
DDDDDQPQGLTKEQIDNLSMRNFGENDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCID
RWLSENSTCPICRRAVLVSANRESVV
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagtatggagcagggtggcagtggccaatcagagtcacagcgtaga
aggcagttggaccgcctggacagggaggaggccttctaccagtttgtcaacaatctcagt
gatgaggactatcgtctcatgagagacaacaatctcttgggaacccccggagaggtaaca
gaggatgagttgtttaacagacttcagcaaatcaaagatggtccagaacagcagaatagc
aatcctagtacagaaactggagaagagccagttgtgcaaccagaaaacccagaggatcct
gctaatggtgatagtctacttgactggctgaacacagtaaggcgcacaggcaacacaacc
agaactggtcatcgtggaaatcaatcatggcgggctgtaagccagaccaacccaaacagt
ggtgattttcgcttcagcctcgaaatcagtgttaaccgcaacctggcagaacaacaggca
gccgctgaaggggagcaagagtctccagagggtcaagaggtggctgcaaatgctgaacca
caggttcccatggagacagaagtggtggaagaaccagtggtagaggagttggctgtcata
gtagaaactgagcctgaactagaagaagttgtttcacaagagattttagaagaatctccc
agctcacctgctcccgcgccgatacaacccccgctttctccttctccacgcagaggacaa
aggagaccccgaagccacagtccagaaccacgcaggaccagagctcgtgcagccaggagc
cgctcccctctcagcttggatcagctagatggtcttggaaatgctcgtcaggctcacacc
tcacaaggttctaacactgctaccacttctccccctgtgcctcaaatggagggtagttca
cggactcgacaacatgttcttaccaggcaaagcacagctgacagtgatgttcagccacct
agggctagttcagaatctgtcccagaggtccataacgttgaacctcaggaaggagaaggt
ggtggtggagaaggcggtggcgaaggcggtggagaaggcggtgcagcaggacggcgcccc
ccaactataatgtttgatcttcaggtgcgccgtgtacatccaggtgaatattggcaaaga
gacagcattgccagccgcacacgctcacgttctcagaactcaaacaacacatttctttat
gagagtgaacgaggtggttttcgtaggactttttcacgctctgagcgagctggtgtgagg
acctatgtcagcaccattcgcatccctatccgaagaatttctgatgcaggtttgggagag
gcaacctcaattgctctccaatcaatgattagacagattatgactggttttggtgaactt
ggctacctcatggattcacactcagattcttcagattcaaatcgtggagctagcacacct
acagatctcggtgaaaccctaaacaaccccgatgctgctgctgccgctgtcgccgccgcc
actgccgctgccgctgctgctgctgctgcagcacctgcacccgctgctgctgcacccact
gctgctgcacccgttgctgctgcacctgctgcacctgctgctgctgcacccgttgctgat
gttggtggatcacctgtggctgctggagtaacagcaaggacagttgagcctgatgtggtt
gaggccctcgccactggaccacctgcctctggtggcagggctcgatctcgaccaccagtt
agcctagaggagcccagctcactgcctttcctgcggcttgcccacttctttcttctaaat
gatgatgacgatgatcagccccaagggctcactaaagagcagattgacaacctctccatg
cgcaactttggcgagaacgatgccttgaaaacctgcagtgtctgcataactgagtatgca
gaaggtaacaagctacgtaagcttccctgttctcatgagtaccatgtgcactgcattgat
cgttggctgtctgaaaactccacctgccccatctgccgcagagctgtactggtctcagcc
aatcgagaaagtgtggtgtag
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