Solea senegalensis (Senegalese sole): 122778465
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Entry
122778465 CDS
T07721
Name
(RefSeq) cartilage intermediate layer protein 1 isoform X1
KO
K24436
cartilage intermediate layer protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
122778465
Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
122778465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
Ig_2
I-set
TSP_1
TSP1_spondin
CarbopepD_reg_2
Ig_5
V-set
ig
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
122778465
NCBI-ProteinID:
XP_043896348
LinkDB
All DBs
Position
LG12:complement(21614322..21620401)
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AA seq
1166 aa
AA seq
DB search
MSLKPLLLILGITAATVVTAQESWRRDNRKPGPSVYHSEENYEWTTWFNVDHPGGRGDYE
QLDAIRFYYRARVCQTPRAIEARTTEWVPARETGEKVHADPTVGFWCLNEEQGPERNCSN
YAVRFLCPKAILDFSMNIQGTWGTWSDWEPCSAACDQVGIQLRSRNCISLSVPCVGPKVE
ERTCNGPECPQTDCSLRCVIGRANAECDACLCEEHVLLGSVRGAGGLTAEGATITRHGKL
LTLTDHNGHLRIPGICPDGNTTLTISLQGHATLSVVVPQSTERTSVVSVQLKRTEKLHVL
SNPESKARREGQTTAFCCKVTGTPQPDKYQWFHNNSLLEKQTDNTLVLKDLHPEQAGEYY
CRASGPSGAIKTKPATLKIIGRNEHSCNPNPDSHHIRLPHDCYQNSTDSFYYDVGKCPSS
TCAGQLDNGIRCKDKLSYCCGVEKMEKRQLTCQGYQLPIMVVITCGCQKCVDTKAIVYGR
AIAADNDEPMRFGHIFMNGVRISRTGYKGTFSVQVPPDTERLVLTFVDNMQKFVDTTKVL
PFNTKGGAVYHEIKLLRKKVPVTISSTDTNMLELGEVEGEEAMVQIQIPPNSFYKENGEV
FTGNVNASVTFLDPRDVSTAAAAQSDLNFIGDEGDTLPLRTYGMFSVDFRSEENNEPLNA
GEVKVFLDSAQVKMPEHLNTMKLWSLNPYTGLWEEEGSLQVEKKRRGKREERTFLIGNME
IRERRLFNLDVPENRRCYVKVRAFRSERFMPSEQVEGVVVSLINMEPSAGYSTNPRAWGR
FDSVITGSNGACLPAFCDEQKADAYSAYVMANLGGEELEAVQSSPKLNPNLIGVPQPYLG
KLNYKRTDHEDQRVKKTAFSINVAKPSPNTAEESNGPVYPFERLKDCEEAPFSAAHFRFS
RVEGDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRACYIKVKISSPHEINVRSHNMGG
THPKTVGQLYGLRDTRSIRDMDQATVSAVCLEFKCSGMLYDQERVDRTLVKVIPQGSCKR
DQVNTMLQEYLVNHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDPRTAKEIALGRC
FDGTSDGTSRVMKSNEGVALAFTCGDREVTRQSVFQALQNPQGQTVTSVVRGEGRQNRRR
QRANALRNSRRRSTRNPTGKRKETKN
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgaagcctcttctcctcatcctgggaatcaccgcagccactgttgttaccgct
caagagtcatggagaagggacaacagaaaacctggtccctctgtctaccactctgaagaa
aactacgagtggaccacatggttcaatgtcgatcaccccggaggtcgtggagattatgag
cagctggacgccatccgcttctattaccgcgcccgagtgtgtcagacaccacgggcaatt
gaggccagaaccacggaatgggttcccgctcgtgagactggggagaaagtccatgcggac
cccactgtgggtttctggtgcctgaatgaggaacaaggccccgaacgtaactgctccaac
tacgcagtccgcttcctctgtcccaaagctatattagatttcagtatgaacatccagggc
acctggggcacctggtcagactgggagccatgctctgctgcctgcgatcaagtggggatc
caacttcgttccagaaactgcatttctctctctgtgccttgcgttgggcctaaagtagaa
gagagaacatgcaatggacccgagtgcccacagacagattgttccctacgttgtgtgatt
gggagggcgaatgccgagtgtgacgcctgcctgtgcgaagagcacgtcctgttgggttcc
gtacgcggagcgggaggtctcactgctgaaggagccaccatcactcgccacggcaaactc
ctcaccctgactgaccacaacggacacttacgcatccccggcatctgccccgatggcaac
accacactgaccatcagcctgcagggtcacgccaccctgagcgttgttgtgccacagagt
actgaacgcacatcggtcgtaagtgtccagctgaaaagaacagagaaacttcatgtgttg
agcaaccctgagagcaaggccaggagggagggtcaaaccaccgccttctgctgcaaagtg
acaggaacacctcagccagacaaataccaatggtttcacaacaacagtctcctggagaag
cagacggacaacaccttggtcctaaaagacctgcatcctgaacaggcaggggaatactac
tgcagagcgagtggtccatctggagccattaagaccaagccagcaacacttaaaatcata
ggtagaaatgagcactcgtgtaaccccaacccggactcccaccacatccgccttccacat
gactgctaccaaaacagcacagactcattctactatgatgtgggcaagtgcccttcaagt
acatgtgctggacagctggacaatggtatcaggtgcaaggacaaattgtcgtactgctgt
ggtgtggaaaagatggagaaaagacagctaacatgccagggctaccaacttcccattatg
gtggtgataacgtgtggttgccagaaatgtgtggacaccaaagctattgtgtatggcagg
gccattgctgcagataatgatgagccaatgaggtttggtcatatctttatgaatggagta
agaatcagccgcacaggctacaaaggtaccttctctgttcaggtccctccagacacagaa
aggctagtcctcacttttgtggacaacatgcagaaatttgtcgacaccacaaaggttctt
ccatttaacaccaaaggaggggcggtttaccatgagatcaaacttctcagaaagaaagta
cccgtcaccatcagctccacagacaccaacatgctagagcttggagaggtggagggtgag
gaggcaatggttcagatccagatccctcccaattctttttataaagagaatggagaagtc
ttcacgggtaatgtcaatgctagtgtaacatttcttgacccaagagacgtctccacagct
gctgcagctcaaagtgatctaaattttataggagatgaaggagataccctgccactgaga
acctatggtatgttctcagttgacttcaggagtgaggaaaacaatgagcccctgaatgca
ggtgaagtgaaagtgttcctggattctgctcaggttaaaatgcctgaacacctcaacacc
atgaagctctggtcattgaacccttatactggcctttgggaggaggagggaagtctacag
gtggagaaaaaaagaagaggcaaaagagaggaaagaacctttctgattggtaacatggag
atcagagagagacggttgttcaacctggacgttccagagaaccgcagatgttacgtgaaa
gtaagggccttccgtagtgaacgcttcatgcccagtgagcaggtggaaggagtcgtagtg
agtctcataaacatggagccctcagctggctactccacaaacccacgtgcctggggacga
tttgacagcgtcatcactgggtccaatggcgcctgtcttcctgctttctgtgacgaacaa
aaagctgatgcatactctgcatatgtcatggccaaccttggaggggaagagttggaggca
gtccagtcttctcccaagctcaatcctaatctcattggagtgccgcaaccatacctgggg
aaactgaactacaagcgaacagatcatgaagaccagagagtaaagaaaacagcattcagc
atcaatgtggcaaagccaagccccaatacagccgaagaaagcaatggaccagtgtaccca
tttgagagattgaaagactgtgaggaggccccattcagcgcagcacactttcgtttctcg
agagtggaaggagaccgctacgattacaacacagtgccattcaatgaagatgacccaatg
agctggacagaggactacctaagctggtggcccaagcccatggaataccgggcctgctac
attaaagtcaaaatcagcagtccacatgaaatcaatgtgcgttcccacaacatgggtggc
acccatcccaagacagtgggccagttgtatggcctccgtgacacccgcagcatccgtgac
atggaccaggcaactgtctcagccgtttgcctcgagttcaaatgtagtgggatgctgtac
gatcaagagcgtgttgatcgtaccctggtgaaggtgattccacagggaagctgtaagaga
gaccaagtcaacacaatgcttcaggagtatctggtcaaccacttgcctctggccgtcaac
aatgacaccaacgagttcaccatgctagcacctctggaccccctgggccacaactatggg
atttacacagtgacagaccaggatccgcgcacagctaaagagatagcacttggacggtgc
tttgacggcacctctgatggtacatctcgtgtcatgaagagcaacgagggtgtggcgctg
gccttcacctgtggagatcgtgaggtgacacgacagagcgtcttccaggctctgcagaat
ccccaaggtcagacggtgaccagcgtagtgagaggagaaggcaggcagaaccgacgccgg
cagagggccaacgcactacgcaacagtcgcagacgtagcaccagaaatcccacgggaaaa
cgcaaagaaaccaaaaactga
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