Solea senegalensis (Senegalese sole): 122778505
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Entry
122778505 CDS
T07721
Symbol
sh3tc2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122778505 (sh3tc2)
Membrane trafficking [BR:
ssen04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
122778505 (sh3tc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
TPR_1
SH3_2
TPR_MalT
TPR_10
TPR_14
SH3_1
TPR_NPHP3
SH3_9
TPR_7
SNAP
Motif
Other DBs
NCBI-GeneID:
122778505
NCBI-ProteinID:
XP_043896405
LinkDB
All DBs
Position
LG12:complement(18178849..18202672)
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AA seq
1593 aa
AA seq
DB search
MALISGSCRLLGQMASCCCRPLLNSSCCGPLIKACLSSFTDISPAELDALWRESPYTLGG
TNDHFSGNDIMTQGTGEDEDGPVVESGEGGVESDSYWKKKEAFFRGSTVSLGDKFSSEIV
LLFTGRRRSSEDPDRTLQEALRTRLRVVESNSQDVIQLFKDLSARLVSVHAEKDSFVLTF
KTVEEIWKFSTYLALGYVARCLENFLCDQSFWLDSELLSDLEINVSVDEEHLATLYLGLL
LQEGSFFAKALFTRSEQDDDDEEQLPFKKNDLLMVKDTGQDNMREGTMLSTGNHGLVPVN
AMQPLPYPFYQWFLRKYPGWAGCSPAEKESFEHPFVTGSCVAVVDYCPLGPDELQLCQGD
IVEIQGLLVQALGVFIGTHTSTGHTGFIHKAHVKPLDTMPLDGQLVFLTEEERASLAQVN
PCDPEPSDSGLLERLFSSDISSVYRLDRLDDSDFMYIRSQPKHDHKVSSSARQSVISERS
GGTPPYHSSPRHSVSVSSPRLSIYHSQNPLPRDGEHLSFTLDEFQEDPPLFLEENSWEGE
ESHLSDPTLTLLNHEHFQEDFLPLCDLQYSFLWLTFSGKTEDELSGHLESVRECAKRTGM
HWAHRRACFLLGRLCARKLKLSQARVYYEEALSVCVDSFSDTPLLIALYTNLTALYLKQR
MTDKLPQTLEKASALLLCLPSHTFTSTDEVELLKLLLRRSVVMGDKRLEARVCYLISSLF
LLLKKTDDALPFVERLQFLTVTLSAAEGRPIAPLDLNWLLSWLYHRKYMPYLALASLSLN
SRQDHSLHDAFQGIELFIRNSVRLNPRWKEGTSLLPAQIVVYLQRALATAEQGDDMKTQR
DLCLGLASVYQQYNAFDKAVLCVQQAVEMGGHINEEEGFEASVLLGWLLVLTGQAERAQS
VLEPLLTSLQGSDSPTQRGVIHNLLALCLRQQGRVPEAGWHLHSALVISRESGNQRNQAL
ALANLGCLALDVGASRVAQRFLVRSLHLFLELWDSPTDEEHVQTYLWLGRSYKDRGRRQE
TRACYEMGLLIALHARNLHSQMVVAKVLSRLYADMLLYGQSIVYFEHCVSVSRDLKDKRL
EGEYLEILSSLYLTLNTERSSRKSLDYTKQSLRISIDLGKREEESETWLQVGRIYYLIQE
DELADMYLQAAVKTALRMNDSHFAMSIYEEAGDVYFRGHRNQMSSLPFFRDGSLPFARCI
KDVHSEFRLLSKLTELLMNHGELEEALQYAPLAVEIAAKTAVQVNERTAYHRLATVYYRL
QQYEMAENYYLKCLSLCPPLLQHPKESRYYTKVYCRLGNITLHKLKDAFDAVGYFHLALA
AALEDQSHPEALYVVYMKLAEIHGNHMPDAHLCQVYRDRAQSLRRVLAGEDDPDPELNLQ
REQHSDVEMAHTDSLFKSTDSIPEDEDYKGESSPRTCVRPVPAKDGCGDTDPGNAHGKED
HHHYLPDTDGACGDRCETDTITSQSYSDSIFTESFDTAKEQMSDTSSSTDTSQTYQNPTE
GADPDFDTDHNMSTQVPVHPTNDITGDTDVRDTDSHKAKDARADPIEEDVSLEDSRPELD
HREAVGLHPDKTVSVDNACDCTETHESETRDTG
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggcattgatctctgggagctgccggctcttgggccagatggcgtcttgttgctgcaga
ccgctgctcaactcttcctgctgtggaccgctcatcaaagcctgcctctcctccttcaca
gacatctctcctgctgagctggatgctctgtggagggaatcaccgtacactcttggggga
acaaatgatcacttctcagggaacgacatcatgactcaaggtactggtgaggatgaggat
ggtccggtggtggagtcaggtgaaggaggggtggagtcagacagttactggaagaagaag
gaagcattctttagaggaagcactgtgtctctgggagataaattctcctcagaaattgtg
ctgttgttcactggacggagacgctccagcgaggatcctgaccggaccctacaggaggct
ctgcgcacgcgactacgagtggtagagagcaacagccaggacgtcatccagctctttaaa
gacttgtctgcacgtctggtgtctgtccacgccgagaaggacagttttgtgctcacgttc
aagactgtggaggaaatttggaaattttcaacttacctggcattaggctatgtggctcgc
tgcttggagaacttcttgtgtgaccagtcgttctggctggactcagagctgctcagtgac
ctggagattaatgtaagcgtggatgaagaacatctggccaccctctacctgggactgtta
ctccaggaaggatccttcttcgctaaggcactgtttacaagaagtgagcaggatgatgac
gacgaagaacagctgccgttcaaaaagaatgacctgctgatggtaaaggacacgggccag
gacaacatgcgggagggcaccatgctctccacaggaaaccatggcctggtgccagtcaat
gccatgcagccgctgccgtaccccttctatcagtggttcctgaggaagtacccaggctgg
gctggatgctcaccagcagaaaaggaatcatttgaacatccatttgtcacaggttcctgt
gtagcagtggttgactactgtccactggggccagatgagctccaactgtgccaaggtgac
attgtggagatccaaggtctgctagtccaagctcttggcgtgttcataggaacacacaca
tccaccggtcacactggatttatacacaaggcccacgtcaaacccctggacaccatgcca
ctagatggacagttggtctttcttactgaggaggagcgagccagcctggctcaagttaac
ccatgtgaccctgagccaagtgacagtggcctgctggaaagactcttctcatctgacatc
agttctgtatacaggctagacaggctggatgattcagatttcatgtacatcaggagtcag
cccaaacatgatcataaggtttcttcaagcgcgcgtcagagtgtcatatcagagcgaagt
ggaggaacacccccgtaccactcctccccacgccactctgtgtctgtctcttctccacgg
ctgtccatttatcactcccaaaaccctctgccacgcgacggggagcatctgtccttcacg
ctggacgagttccaggaagacccacctctcttcttggaggagaacagctgggagggggag
gaatcccatctcagtgaccccacactgaccctgctcaaccatgaacacttccaggaggac
ttcctgcctctgtgtgacctgcagtactccttcctgtggttgaccttcagtgggaagact
gaggacgagctctcaggtcacctcgagagtgtcagggagtgtgccaagaggacgggcatg
cactgggcacatcgacgggcatgttttctcctgggaagactctgtgcccggaagctaaag
ctctctcaggcacgggtgtactatgaggaggctctgagcgtttgtgtggacagtttctcc
gacaccccgctcctcatcgctctctacaccaacctcactgccctctacttgaagcagcgc
atgactgacaaactgccccagactctggagaaggccagtgctctgctcctctgtctcccc
agccacaccttcacctccacagacgaggtcgaactgctgaagctgctcctgaggagatca
gtggtgatgggagacaaaagattggaggctcgtgtctgctacctcatctccagcctcttc
ctgcttctcaagaagactgacgacgcccttccttttgttgagagactccagtttctcact
gtaactctctccgctgccgagggacgacccatagctccgttggacctcaactggctcttg
agctggctctatcatcgtaaatacatgccttacttagcactggcttctctgagtctgaac
tcaaggcaagaccactcactccatgatgcctttcaggggattgagttgtttatcaggaac
tctgttcgcctgaatccacgctggaaggaaggaacttccctactccctgcccagattgtg
gtttaccttcagcgagcgttggctacagctgagcagggggacgacatgaagacccaaagg
gacttgtgtttgggcttggcctcagtctaccagcagtataatgcatttgacaaagcagtg
ctctgtgttcaacaagccgtagagatgggtggccacatcaatgaggaggagggctttgag
gcctctgtgctgctcgggtggttgctggtgttgacaggacaagcggagagggcccagagt
gtcctagaaccactgctcacatcacttcagggttcagacagtcccacacagcgaggagtg
atccacaacctcttggctttgtgtctgaggcaacagggtcgcgtcccagaggcaggctgg
catctccactcagccttggtcatctccagggagagtgggaatcagaggaaccaggcgctt
gcactggccaacctgggctgcctggcactggatgtgggggcgtcacgggtggcacagcgc
ttcctcgtcagatcactgcacctttttcttgagctttgggacagtcccacagatgaggag
catgttcagacctacctgtggctggggcggagctacaaagacagggggaggagacaggaa
accagagcgtgttatgaaatgggactgttaattgcactacatgccagaaacctgcacagt
cagatggtggtggccaaggtgctgagtcgactgtacgctgacatgctactgtacggtcag
agtatcgtttattttgagcactgtgtgtcggtatccagagatctcaaggacaagagatta
gagggagagtacctggaaatcctcagcagcctctacctcacactcaacactgagaggtct
tctcgtaagtctctggactacaccaagcagagtctgaggatttccattgatttggggaag
agggaggaagagtcagagacgtggttacaagtgggacgcatatattacctcatccaggag
gacgagctggcggacatgtacctgcaggcagcagtgaagacagcattgaggatgaatgat
tctcactttgccatgagcatctatgaagaggcaggggacgtctacttcagaggccacagg
aatcagatgtcttctttgcctttcttcagggatggcagtctgccatttgcacgctgcatc
aaggacgtccactcagagtttcgtttgttgagtaaattgacagagctgttgatgaaccac
ggtgagctggaggaggctctgcagtacgcaccactggctgttgagattgccgccaaaaca
gctgtgcaggtgaacgagaggacagcgtaccacagactggcgacagtttactacagactg
cagcagtacgagatggcagaaaactactacctcaagtgcctgtccctctgtcccccgctc
ctgcagcacccaaaagagtctcgctactacaccaaggtctactgcagactaggaaatatc
accctacacaaactgaaggatgcgtttgatgcagtgggctacttccacttggccctggca
gcagccctggaggaccaatctcaccctgaggctctgtatgtggtgtacatgaagctggca
gaaatccacggcaaccacatgcccgatgctcacctgtgccaggtttacagggacagagcc
cagagtctgaggagagttctggctggagaggacgacccagacccagagctcaacctgcag
agggaacagcactcagatgttgaaatggcacatacagacagtttgtttaagagcactgat
tccatacctgaagatgaagattacaaaggtgagtcaagtccaagaacatgtgtgaggcct
gttcccgcaaaggacggctgtggagacactgatcctggaaatgctcatggaaaagaagac
caccatcactatcttcctgacacagatggcgcttgcggggatagatgcgagacggacacc
atcaccagtcaatcgtacagtgacagtattttcactgagtcctttgatacggcaaaggag
cagatgtcggacaccagcagctccactgacacttcgcaaacttaccagaacccaactgag
ggggctgacccagactttgacactgaccacaacatgtccacccaagtacctgtccacccc
accaacgatatcacaggagacacagatgttagagacactgattctcataaagcaaaggac
gctcgtgcagatcctatagaagaagacgtcagtctggaggacagtcggcctgagcttgac
cacagagaggctgttggactacatccagacaagactgttagtgtagacaacgcttgtgac
tgcacagagacacatgaatctgagacgagagacacagggtga
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