Solea senegalensis (Senegalese sole): 122778526
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Entry
122778526 CDS
T07721
Symbol
aff2
Name
(RefSeq) AF4/FMR2 family member 2 isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122778526 (aff2)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122778526 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
122778526
NCBI-ProteinID:
XP_043896443
LinkDB
All DBs
Position
LG12:15189223..15336367
Genome browser
AA seq
1586 aa
AA seq
DB search
MDLFEFDFFRDWELEQPCHLESERSALKRREWERRNQEVQQDEDLFSTGFNLFGEPYKTN
KGDALANRVQNTLGSYEEMKDLLTSHSNQSHLVGIPKGSGVNNNLQTPTTSTTDRPTMES
QLFNETLRGVAGGGGGGGGGGGEEAGGDKRTGNAASSSSTSMQPPASTTSSSSSSSSSTS
TVTHQTSKKSRSSMDWSKGGHGQTSQAAGHVLGLGQSGQGQAAGAASGRGKICLLEEHQM
QRHEELFSSLKDELGLKGDSSPSSSSSSSSSSSSSSRRHSAHPSKTLTLPDGGNFRSSAI
DGGHFKSSTNTDNGGHFKSSPFENETGSHFSTPSSPLASTSVVTTPTPGLTTPTSGLTTP
TFPPGSLSGKPVAVQQKPTAYVRPMDGQDQVPSDSPQLKPPLVATEGFNSTQAYGGNSGN
VKSKLPKLTLNHTGEVSLPNDSSCVEEILREMTHSWPPPLTAIHTPGKADQTKFPIPNKE
SQHVTSGYNSQKRCSISTNKPTAKPPSAPQKYMLEDDLKISSDEEDAEQQVSDKPKARGT
AVSGASGSSSESESSSESDTDESESSSSDSEYNQASRTNTPEPEPPSTNKWQLDSWLNKV
QAQTKPLVSAQQEHHHGTGSITQGPETFSPGSEAAVGVGTTAKAKPGTSSSTSAAAAPTV
EHKDIRGTFCVGREKAKAKLSQKTSGENQRSKMRLSPALLSGPEVTTPRRNTTGKKQPRR
TERSNSVEDNQNQTWSRANQHSSPAATRDKDLLPSSSLEHQNPPRSRSKTPSGKTAPRKE
PRSATTSSNNTITPPAVLQQTPVPIPAVGVNQDKDKRKHRGPSTRITPKSREFIETDSSS
SSSECHSESEEAIKIPALPQTTRAAINTQTLSNMHMHAPLLPCLGSAASLGGLGTFGGKG
LRVKDGGNVTVNGSSSTNSSISSGNNGSSNSCNSLSISNISGSFGTSVPDPGGLGGQCKD
LESMSPPPNTGHEVPLSPLRDYQESQSLWVKIDLSLLSRVPVQGLGERSRVGLTERDGSE
GRDRERQGERTGVAERERQKQEDREWSGLRERQRLTKGERQEEENERLVQDRERQGDRDR
LTERERQTDREDRERLGLGERERTMAREREKVCVGLGALENSSVPEQSNTRLAGRTERGE
NEGKHRRQAAGNMMVSTEKHTSKNKRKHKSDHTESPVNGSKKLRLDKDCQLLPPCISPIH
NHKNSSTDSLNRKQSRRRNEKLLPPLLSPLSDEPPRKRTCDSSASLNQDGGTTGILPCST
TSTSTSSSSSSSSHRHRRGEVKVSAHARNGSEMDPSSEKPCGDGYHANGQSDSDVWTEPP
MDPAEPRRPKLSFSDTVHSADYYMQEAKRLKHKADALMDKFGKAVNYADGALSFIECGNA
MERDPLEAKSPYTMYSETVELIRYAMRLKNFGSHSATVAEKKLAVLCNRCLSLLYLRMFH
LKKDHAVKYSRSLMEYFKNSAKSSHHAPSPWRTNGKVNGTPSPLSLSPSPASNGGGGSGG
APSSLGSVAIPQRIHHMAASHVNITNNILRSYEHWETADRLATDSQDFFQELDSVMEPLS
QQSSMTELVRYIRQGLHWLRIEAHLL
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atggatctctttgaatttgactttttcagagactgggagcttgaacaaccatgtcatctg
gagtcagagcgcagcgccctgaagaggagagagtgggagaggaggaatcaggaggtccaa
caggatgaagacctgttctcaactggattcaacctgtttggagaaccgtataaaactaat
aaaggtgatgcattggccaatcgtgtccagaacacactgggctcttatgaagaaatgaaa
gacctgttaaccagccactccaaccaaagccacttggtgggaatccccaaaggcagcggc
gtgaacaacaacctgcaaaccccaaccacctcgacgacagacagacccaccatggagtct
cagcttttcaatgaaaccttaagaggagtagcaggaggaggtggaggaggaggaggagga
ggaggagaagaagcaggtggggacaagaggacgggaaatgcggcttcctcgtcttccacc
tccatgcagccacctgcttccaccacatcatcatcatcatcgtcatcatcaagcacatcg
acagttacacatcagacttcaaagaagtcccggagttccatggactggtcaaaaggagga
cacggacagacttcgcaagcagcaggtcacgttctgggtttaggccagagtggtcagggt
caggctgcgggagccgccagtggcagagggaagatctgcttactggaggaacatcaaatg
caaaggcacgaagaactgtttagctcactgaaagacgaactcggtctaaaaggagattca
agcccttcttcctcttcgtcctcctcctcctcttcctcctcttcttctagaagacactcg
gcccatccttctaaaacccttactctcccagatggtggaaattttcgatcctccgccatc
gacggaggccatttcaagtcttccacaaacacagacaatggtggccattttaaatcctcg
ccgttcgaaaatgaaacaggttctcacttctcaacaccgtcgtccccgctggcttccaca
tcagttgtgacgacgcccactccgggcctaaccacgcccacatctggactaaccactccc
acctttccccctggcagcctatcagggaagccagtggcagtgcagcagaagcccacagca
tatgttcgaccaatggatggccaggaccaggtgccgagtgactctccccagcttaaaccc
cctctagtggccacggagggattcaacagcacgcaagcttatggaggaaactctggaaac
gtgaagagtaaactgccaaaactgactctgaaccacacgggagaggtcagcctgccaaat
gactccagctgtgttgaagagattctgcgggagatgactcattcctggcctcctcctctc
acagccatacacactcctgggaaggctgatcagaccaagttccccatcccaaacaaggag
tcacagcatgtgacctcgggctacaacagccagaagcgatgtagtatatcaactaacaag
cccactgctaaaccaccaagtgcaccgcagaagtatatgttggaggacgacctgaagatc
agcagcgatgaggaagacgccgaacaacaggtgtctgacaagccaaaagccagaggcaca
gctgtgagtggtgcatcggggagcagcagcgaatcagagagcagctcagagtcagacacg
gatgaatcggagagcagctccagcgacagcgagtataaccaggcctcccgcacaaacaca
cccgagcctgagccaccgtccaccaacaagtggcagctggacagctggttgaacaaggtc
caagctcaaaccaaacctctggtttctgcacagcaagaacatcatcatggcacaggctcc
atcacccagggtccagagaccttctctccaggcagtgaagcagcagtgggagtgggtaca
actgccaaggccaagcccggtacatccagtagcacctctgctgcagctgcaccaacagtg
gaacacaaggacatcagaggaaccttttgcgtgggcagagagaaggccaaggccaagctc
agccagaagacctcgggggaaaaccaaaggtccaagatgaggctgtcaccggccctgctg
tcaggcccagaggtcacgaccccgaggaggaacaccacagggaaaaaacagcccagacgg
acagagaggtcaaacagtgtggaggataatcagaaccagacatggagcagagcaaaccag
cacagcagccctgctgctacgagggacaaggacctgttgccttcgtcctccctggagcat
cagaacccaccgaggtctcgaagcaaaacccccagtgggaaaacagcccccaggaaggag
cctcgcagcgctaccacatccagcaacaataccatcaccccaccagctgtgcttcagcaa
acgcctgtgccaatacctgctgtcggcgtgaaccaggataaggataaaaggaagcacaga
ggcccgagcaccagaatcacacccaagtcccgggaattcattgaaacggattcgtcctcc
tcctcctcagaatgtcactctgagtcagaggaagccattaaaatccctgctctgccacag
acgacacgcgctgcaattaacacgcagactctgtccaacatgcacatgcacgcgcctctc
ctaccatgccttggctccgctgcaagtttggggggtctgggaacatttggaggaaaaggg
ctgcgagtcaaagatggcggtaatgtgaccgttaatggtagcagcagcactaatagtagc
attagcagcgggaataatggcagcagtaacagctgtaactccctaagcattagcaacata
agtggttcatttggtacatctgttcctgatcctggagggttaggagggcagtgtaaggac
ctggagtccatgtcaccgcctccgaacacgggacacgaggtgcctctgtcccccctaagg
gactatcaggagagccagagtttatgggtcaaaattgacctcagtctgctcagcagggta
ccggttcagggtttgggggaaagatccagggtgggtctcacggaaagggatgggagtgaa
gggagagacagagagaggcagggagagaggacaggtgtggcagagagagagcgacagaag
caggaagacagagagtggtcagggctgagggaaagacagaggttaactaaaggggagcga
caggaggaggaaaatgagcgactagttcaggacagagagaggcaaggtgacagagaccga
ttaacagagagagagaggcagacagacagagaggacagagaacgattagggctcggggag
agggagaggacaatggcgagggagagagagaaagtatgcgtgggactgggcgctctggaa
aactcctctgtgccagagcagagcaataccaggctagctgggcggacagagagaggagag
aacgaaggtaaacacaggagacaagcagccgggaacatgatggtctcaacagagaaacac
accagcaagaacaagaggaaacacaagtcggaccacaccgagtcaccagtcaacggcagt
aagaagctgcgactggacaaagactgtcagctcctccctccctgcatctctccaatacac
aaccacaagaacagctctacagactctctgaacaggaagcagtctcgacggcgcaacgag
aagctgctaccccccctcttgtccccgctctctgacgagcccccacgtaaacggacctgt
gacagcagtgcgtctctgaaccaggacggtggcaccacagggattctgccctgctccacg
acgtccacctccacctcctcctcctcctcctcctcctctcacaggcacaggagaggtgaa
gtcaaggtgtcggcacatgcgagaaatggcagcgaaatggatccctccagcgagaagccc
tgtggagatggttaccatgccaacggacagtcagactccgatgtgtggacggaaccaccg
atggatcctgccgagcctcgcaggccaaagctgtcgtttagtgacacagtccacagtgcc
gactactacatgcaggaagccaagagactgaagcacaaggctgatgctttgatggacaaa
tttggtaaagcggtgaactacgcagacggagccctctccttcatagagtgtggaaatgcc
atggagcgagatccactagaggccaaatcaccttataccatgtactctgagactgtggag
ctcatcaggtacgccatgaggttgaagaacttcggcagccattcagccaccgtcgccgag
aagaaacttgccgtgttgtgtaaccgctgtctgtctctgctgtatctgaggatgttccat
ttgaagaaagaccacgctgtcaagtactcgcggtcactcatggagtacttcaagaattca
gccaaaagctcccaccacgcaccttctccctggagaaccaatgggaaggtcaatgggact
ccatctcctctctcactcagcccctccccagccagcaatggaggaggaggatctggaggg
gccccaagctcgttgggcagtgtagctattccccaacgcattcaccacatggctgccagc
catgttaacataaccaacaacatcctgaggagctatgaacactgggagacggctgacaga
ctggccaccgatagccaagatttcttccaggagctggactcggtcatggagccactgagt
cagcagagcagcatgactgagcttgtgcgatacatcaggcagggactacactggctccgt
atagaggctcacctgctgtag
DBGET
integrated database retrieval system
