Solea senegalensis (Senegalese sole): 122778694
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Entry
122778694 CDS
T07721
Name
(RefSeq) ras GTPase-activating protein-binding protein 1-like
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
122778694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122778694
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122778694
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122778694
5.6.2.5 RNA 5'-3' helicase
122778694
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
122778694
Exosome [BR:
ssen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122778694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
122778694
NCBI-ProteinID:
XP_043896710
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All DBs
Position
LG12:24558146..24565647
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AA seq
498 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDGNGKAAEAVYGQSE
IHKRVMALSFRDCHTKIRHVDAHATLNEGVVVQVMGELSNNMQPMRKFMQTFVLAPEGTV
ANKFYVHNDVFRYQDEVFGDSDSEPPEESDDEVEDIEERVPSPDVAAEESAPFYDPTACP
EPAVPGDDEEAAASPEPEPEVEKEDEAVAVELKSETSLETQTDVHAADDQTEKSPASAPP
TTEAASAPAEPAPAAPEENRPFSWASVTSKNLPPSGAVPVSGIPPHVVKATPTAPPRAEV
KSESQTATQRPQRDQRPREQRPGGGPPPVHRGPRPVREGEQGESEGRRVVRYPDAHQLFV
GNVPHDVDKSELKEFFEQFGTVLELRINSGGKLPNFGFVVFDDSEPVQKILSNRPIKFRG
DVRLNVEEKKTRSAREGDRRDTRPRGPGGPGGPRERIGGGGGGGRGGPPTRGGVAQKPSF
GSGRGAGPNDGRYSAQRQ
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagctggtcgggcgagagtttgtccgacagtactac
acactcctgaaccaggctcctgactacctgcacaggttctatggaaagaattcctcctac
gtgcacggcggcctggacggcaacggcaaagcagccgaggccgtttacggtcaatctgag
atccataagagggtgatggctctgagtttccgtgactgtcacacaaagatccgacacgtg
gacgctcacgccaccctgaacgagggcgtggtggtgcaggtgatgggcgagctgtccaac
aacatgcagcccatgaggaagttcatgcagacgtttgttctggcgcccgagggtaccgtc
gcaaacaaattctacgtgcacaacgacgttttccgttaccaagacgaggtgttcggcgac
tcggactctgagcctccagaagagtctgatgacgaggtggaggacatcgaggagagggtt
ccctccccggacgtcgctgcagaggaatctgctcccttctacgacccgacagcctgtccg
gagccggctgttcctggcgacgacgaggaagcggcggcgagtcctgaacctgagccggag
gtagagaaggaggacgaggctgtggctgtggagctgaagtcggagacgtctctggagacg
cagacggatgtgcacgcagccgacgaccagacagagaaaagccccgcctccgccccccca
accacagaagcggcctctgcgcccgctgaacctgcccctgccgccccagaggaaaacagg
ccgttctcttgggcgtcggtcaccagtaagaacctccctcccagtggggccgtcccagtc
tcaggaatccccccacatgttgtcaaagccactcccacagcaccgccccgggcagaggtg
aagtcagagtctcagacggcgacacagagaccacagagagaccagcggccgagggaacag
aggcccggaggaggtcctccaccggtgcacagaggacccagaccagtgcgagagggcgag
cagggcgagtccgagggtcgccgcgtcgtcaggtatcccgacgcccaccagctcttcgtg
ggcaacgtcccgcacgacgtggacaagagcgaactcaaggagttctttgaacagtttggt
acagtcctggagctgaggatcaacagtggaggaaaactcccaaactttggtttcgtggtg
tttgatgactctgaacctgttcagaagatcctcagtaacaggcccatcaagttcagaggc
gacgtccgtctcaacgtggaggagaagaagactcgctcggccagggagggcgaccggcgg
gacacgaggccccggggtcccggaggtcccggcggcccccgggagcgaattggaggcggc
ggtggtggcggtcgcggaggcccgcccactcggggcggtgtggcacagaaacccagcttt
ggctctggacgcggcgccggccccaacgacggccgctactctgcccagcgtcagtga
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