KEGG   Solea senegalensis (Senegalese sole): 122778712
Entry
122778712         CDS       T07721                                 
Name
(RefSeq) nuclear cap-binding protein subunit 1
  KO
K12882  nuclear cap-binding protein subunit 1
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03013  Nucleocytoplasmic transport
ssen03015  mRNA surveillance pathway
ssen03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122778712
  09122 Translation
   03013 Nucleocytoplasmic transport
    122778712
   03015 mRNA surveillance pathway
    122778712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssen03019]
    122778712
   03041 Spliceosome [BR:ssen03041]
    122778712
Messenger RNA biogenesis [BR:ssen03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     122778712
Spliceosome [BR:ssen03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    122778712
SSDB
Motif
Pfam: MIF4G_like_2 MIF4G_like MIF4G FapA AAA_13 DUF1690 Vfa1 Spectrin_Anc-1_2 AAA_11 Apolipoprotein tRNA_bind_2 Importin_rep_6 Exonuc_VII_L DUF1664
Other DBs
NCBI-GeneID: 122778712
NCBI-ProteinID: XP_043896737
LinkDB
Position
LG12:complement(23321041..23335191)
AA seq 795 aa
MSRRRHSDENDGGQAHKRRRTSEPIEIEDRLESLICRVGEKSTASLESNLEGLAGVLEAD
LPNYKSKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNNL
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRSDWFVYVVLSCLPWV
GKELYEKKDVEMDRLLSQVEGYLKRRVKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPMPRVVFRMFDYTDAPEG
PVMPGSHSVERFVIEENLHNIIKTHWKERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPSPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMMYMRLDTMNTTCIDRLINWFSHH
LSNFQFRWSWDDWSDCLAVDLDKPKPKFVKEVLEKSMRLSYHQRIVDIVPPTFSALIPAE
PIFIYKYLDEAASSLPGYPLSITLGNAIKNRATNEEILTILKELPNPNQEDDDDEGETFN
PLKIDVFLQTLLHLAAKSFSHSFSALAKFHEILKTLADSDEGKLHTLKVIYDAWRNHPQM
IAVLVDKLIRTQIVDCAAVANWLFSQDMAHEFTRLYIWEILHSTIRKMNKHVQRIQKELE
EAKDKLEKQQHKRRDSGDDEEMDKNSEDEDNQLEEQIERLQEKVESAQSEQKNLFLVIFQ
RFIMLLTEHLVRCESGSVDVSTPWYKNCVERLQQVFLMHHVTIQQYMGTLENLLFTAELD
HHILAVYQQFCALQL
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgtcccggaggcgacacagcgacgagaatgacggaggccaggctcataaaagaaggaga
acatcggagccgattgagattgaagatcgtctggagtcactgatatgtcgtgtgggggag
aagagcacggcgtctctggaaagcaacttggaaggcctcgcgggcgtcctggaggcagat
cttccaaactacaaaagcaaaatcctgcgcattttatgtgctgtcgcccgcctcctccct
gagaagctgactgtctacacgactctggtcggcctcctcaacgccagaaactacaacttc
ggaggcgagtttgtcgaggccatgatcagacaactcaaggagacgttgaaaaacaacttg
tacaatgaagcggtttatctggtgcgttttttgtctgacttggtcaactgtcacgtgatt
gcggctccatccatggtggccatgtttgaaaactttgtcagtgttacccaagaggaagac
gtaccacaggttcggtcagactggttcgtgtatgtcgtcctctcctgtttgccctgggtc
ggtaaggaactgtacgagaagaaggatgttgagatggaccgcctcctcagccaagtcgaa
ggctacctcaagaggagagtaaagactcatgtcccaatgctgcaggtgtggacagcagag
aagcctcatcctcaagaagagtatctggactgtctgtgggctcagattcagaagctaaag
aaagatcgctggcaggagcgtcacatccttcgtccgtacatcgccttcgacagcgtcctg
tgtgaagctctgcagcacaacctgccgcccttcactccaccgggacacatgcccgacgcc
cagtaccccatgcctcgggtcgtcttccgcatgttcgactacactgatgccccagagggt
cctgttatgcccggcagtcattctgtggagagatttgtcattgaagaaaacctgcacaat
atcatcaagactcactggaaagagagaaaaacatgtgctgcccagttactcagttatcca
gggaaaaacaagattccactcaactatcacatcgtggaggtgatctttggggaacttttc
cagctgccttctccgcctcacatcgacgtcatgtacaccacgctgctcatcgaactctgc
aaactgcagccagggtcactgccgcaagtcttggctcaagctacagagatgatgtacatg
agactggacaccatgaacaccacctgcatagacagactaataaactggttttctcaccat
ttgagcaacttccagtttcgatggagctgggacgactggtccgactgtttggcggtggat
ctggacaaacccaagcccaagtttgtgaaggaagttctggagaagtctatgagactctcg
taccatcagcgcatcgtggacatcgtccctcccaccttctcagctctcatccccgctgaa
cccatcttcatatacaagtacttagacgaggctgcatcctcgctacctggttacccgtta
tccatcactctcggaaacgccatcaagaaccgagcgaccaacgaggagatcctgaccatc
ctcaaagaactgcccaacccaaaccaggaggacgacgatgatgaaggcgagaccttcaac
cctctgaagatcgacgtcttcctgcagactcttctccacctcgctgccaaatccttcagc
cactccttcagcgccctcgccaagtttcatgaaatcctgaagactctggccgacagcgac
gaggggaagctgcacacgctcaaagtgatttatgacgcgtggaggaaccacccacagatg
atcgcggtgttggtggacaaattgatccggacacagattgtcgactgtgccgccgtcgcc
aactggcttttctcgcaggacatggctcacgagttcaccagactttacatctgggagatt
ttgcactcgacgatccgaaagatgaacaaacacgtccagaggatccagaaggaactggag
gaggccaaggacaagctggagaaacagcagcataagaggagggacagtggtgacgacgag
gaaatggacaagaacagcgaggacgaggacaatcagctggaggagcagatcgagaggcta
caggagaaagtggagtcggcgcagagcgaacagaagaacctcttccttgtcatcttccag
cgtttcatcatgttgttgacggagcatctggttcgttgtgagagcggcagcgttgacgtc
agtacaccgtggtacaagaactgtgtggagagactgcagcaggttttcctcatgcaccat
gtgaccatccagcagtacatgggaaccctggagaacctgctgttcacggctgagctcgat
catcacatcctggccgtctaccagcagttctgtgctctgcagctctga

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