Solea senegalensis (Senegalese sole): 122778712
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Entry
122778712 CDS
T07721
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
ssen03015
mRNA surveillance pathway
ssen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122778712
09122 Translation
03013 Nucleocytoplasmic transport
122778712
03015 mRNA surveillance pathway
122778712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122778712
03041 Spliceosome [BR:
ssen03041
]
122778712
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
122778712
Spliceosome [BR:
ssen03041
]
Common components
Common spliceosomal components
Cap binding complex
122778712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
FapA
AAA_13
DUF1690
Vfa1
Spectrin_Anc-1_2
AAA_11
Apolipoprotein
tRNA_bind_2
Importin_rep_6
Exonuc_VII_L
DUF1664
Motif
Other DBs
NCBI-GeneID:
122778712
NCBI-ProteinID:
XP_043896737
LinkDB
All DBs
Position
LG12:complement(23321041..23335191)
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AA seq
795 aa
AA seq
DB search
MSRRRHSDENDGGQAHKRRRTSEPIEIEDRLESLICRVGEKSTASLESNLEGLAGVLEAD
LPNYKSKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKNNL
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRSDWFVYVVLSCLPWV
GKELYEKKDVEMDRLLSQVEGYLKRRVKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPGHMPDAQYPMPRVVFRMFDYTDAPEG
PVMPGSHSVERFVIEENLHNIIKTHWKERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPSPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMMYMRLDTMNTTCIDRLINWFSHH
LSNFQFRWSWDDWSDCLAVDLDKPKPKFVKEVLEKSMRLSYHQRIVDIVPPTFSALIPAE
PIFIYKYLDEAASSLPGYPLSITLGNAIKNRATNEEILTILKELPNPNQEDDDDEGETFN
PLKIDVFLQTLLHLAAKSFSHSFSALAKFHEILKTLADSDEGKLHTLKVIYDAWRNHPQM
IAVLVDKLIRTQIVDCAAVANWLFSQDMAHEFTRLYIWEILHSTIRKMNKHVQRIQKELE
EAKDKLEKQQHKRRDSGDDEEMDKNSEDEDNQLEEQIERLQEKVESAQSEQKNLFLVIFQ
RFIMLLTEHLVRCESGSVDVSTPWYKNCVERLQQVFLMHHVTIQQYMGTLENLLFTAELD
HHILAVYQQFCALQL
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggaggcgacacagcgacgagaatgacggaggccaggctcataaaagaaggaga
acatcggagccgattgagattgaagatcgtctggagtcactgatatgtcgtgtgggggag
aagagcacggcgtctctggaaagcaacttggaaggcctcgcgggcgtcctggaggcagat
cttccaaactacaaaagcaaaatcctgcgcattttatgtgctgtcgcccgcctcctccct
gagaagctgactgtctacacgactctggtcggcctcctcaacgccagaaactacaacttc
ggaggcgagtttgtcgaggccatgatcagacaactcaaggagacgttgaaaaacaacttg
tacaatgaagcggtttatctggtgcgttttttgtctgacttggtcaactgtcacgtgatt
gcggctccatccatggtggccatgtttgaaaactttgtcagtgttacccaagaggaagac
gtaccacaggttcggtcagactggttcgtgtatgtcgtcctctcctgtttgccctgggtc
ggtaaggaactgtacgagaagaaggatgttgagatggaccgcctcctcagccaagtcgaa
ggctacctcaagaggagagtaaagactcatgtcccaatgctgcaggtgtggacagcagag
aagcctcatcctcaagaagagtatctggactgtctgtgggctcagattcagaagctaaag
aaagatcgctggcaggagcgtcacatccttcgtccgtacatcgccttcgacagcgtcctg
tgtgaagctctgcagcacaacctgccgcccttcactccaccgggacacatgcccgacgcc
cagtaccccatgcctcgggtcgtcttccgcatgttcgactacactgatgccccagagggt
cctgttatgcccggcagtcattctgtggagagatttgtcattgaagaaaacctgcacaat
atcatcaagactcactggaaagagagaaaaacatgtgctgcccagttactcagttatcca
gggaaaaacaagattccactcaactatcacatcgtggaggtgatctttggggaacttttc
cagctgccttctccgcctcacatcgacgtcatgtacaccacgctgctcatcgaactctgc
aaactgcagccagggtcactgccgcaagtcttggctcaagctacagagatgatgtacatg
agactggacaccatgaacaccacctgcatagacagactaataaactggttttctcaccat
ttgagcaacttccagtttcgatggagctgggacgactggtccgactgtttggcggtggat
ctggacaaacccaagcccaagtttgtgaaggaagttctggagaagtctatgagactctcg
taccatcagcgcatcgtggacatcgtccctcccaccttctcagctctcatccccgctgaa
cccatcttcatatacaagtacttagacgaggctgcatcctcgctacctggttacccgtta
tccatcactctcggaaacgccatcaagaaccgagcgaccaacgaggagatcctgaccatc
ctcaaagaactgcccaacccaaaccaggaggacgacgatgatgaaggcgagaccttcaac
cctctgaagatcgacgtcttcctgcagactcttctccacctcgctgccaaatccttcagc
cactccttcagcgccctcgccaagtttcatgaaatcctgaagactctggccgacagcgac
gaggggaagctgcacacgctcaaagtgatttatgacgcgtggaggaaccacccacagatg
atcgcggtgttggtggacaaattgatccggacacagattgtcgactgtgccgccgtcgcc
aactggcttttctcgcaggacatggctcacgagttcaccagactttacatctgggagatt
ttgcactcgacgatccgaaagatgaacaaacacgtccagaggatccagaaggaactggag
gaggccaaggacaagctggagaaacagcagcataagaggagggacagtggtgacgacgag
gaaatggacaagaacagcgaggacgaggacaatcagctggaggagcagatcgagaggcta
caggagaaagtggagtcggcgcagagcgaacagaagaacctcttccttgtcatcttccag
cgtttcatcatgttgttgacggagcatctggttcgttgtgagagcggcagcgttgacgtc
agtacaccgtggtacaagaactgtgtggagagactgcagcaggttttcctcatgcaccat
gtgaccatccagcagtacatgggaaccctggagaacctgctgttcacggctgagctcgat
catcacatcctggccgtctaccagcagttctgtgctctgcagctctga
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integrated database retrieval system