Solea senegalensis (Senegalese sole): 122778813
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Entry
122778813 CDS
T07721
Symbol
frmpd1b
Name
(RefSeq) FERM and PDZ domain-containing protein 1 isoform X1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
122778813 (frmpd1b)
Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
Other domain-containing proteins
FERM domain-containing proteins
122778813 (frmpd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
RA_2
FERM_C_FAK1
PDZ
PDZ_6
FERM_f0
Rrp15p
DUF6288
Motif
Other DBs
NCBI-GeneID:
122778813
NCBI-ProteinID:
XP_043896846
LinkDB
All DBs
Position
LG12:complement(13132478..13154813)
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AA seq
1698 aa
AA seq
DB search
MEEKERCRSRSPARRASRVQQVVGTIIRRTRDSLSRERLLGDGRSQRSNSLSNQNFQAKL
TLQITRDPVLDSSTGHGFTLTTNAPLLVRDIATGSPADGILYLGDQVLQINDAVLEDLST
EQVENILRNLEDCINVTILRHMTNPKSSIMSAEKRARLRSNPVKVRFAEEVVVNGHTQGN
SLLFLPNVLKVYLENGQTKAFKFDGTTTVKDIVLTLKNKLSIRAIENFALVLEQQYSITK
LLLLHEDEHIQKVVQKKDSHDYRCLFRVCFIPRDPVDLLQDDPSTFEYLFLQSVADVLQE
RFAVEMKCNTALRLAALHMHERLDSCGQTRASIKSITKEFGLDSFISPTLLSNMREKDLR
KAISYHLKKIQSLLEPRQKVISASQARLAYLTQLGELISYGGRSYTATMMLQDREVLVSL
LVGAKYGMSQIINHKLNVISTLVEFSSISRVELLSESDKVSLLRISLHDMKPFALLMDSL
AAKDLGCLLGGYCKLMVDPNVNVFRLGRPKVRVHRIPAEEGVCGRFGVIEGVCYESLSSY
VSRCCSDSEDSTDEDDPMDSQRPDPASQDWEERRREEEEKRREEERKEREEHQGRQEVKI
IVTTEGKENEDEEEAGATGCTIRKFGVIDEEMNLGTTWYHTDPRVTSSFSSLSSGSLSAA
LEESSASAKAPSHKDALHGHCTVDDLPGLDVHHPYLLEPKCHQGPLRPTNLNYRGNDNSC
LCFAELSKSDFLPSPPEATSDDEEDDDEEQEEQGVEGLRRISKIPSSRDLRLIDSTPFQR
SPIRKKKKTPPKVPLRTSSIPGHKAGEAEQRLSKDEESLYLTPSPNLKPALLAKETASES
EDEFFDAQERFTPPVPDLSDAELADRQNANRLSGTWNDVSVAPVRESSSPLASKTQTSKI
KKDVETLKGPTNQLTNHQSSSPKRSQKPEVKVKPPLAPKPQLLPKPQNIPPRSPQHGKSY
AHCNGDASGRLSSELLEMEPDTMEFKSVTSGAGGLPLITAVRCSKQPLPVRTPQTEEKTT
GAHENGADLVAKHEANVPDKKEMVKVERQANGTSIRANKPPNLFPIPPSNSGTKPAAPPP
VPPKPNCSTIRHPLSLPASSPVSPTDPDKGIFKESINPPNGIHPWSNRNGSIPSGPRRVS
QSHESLSPKNTDAPLSITTSLNSTNSKGVAGLQSREPGRSDSGSDLRTSSSSLGGRLPAS
ALRGKIQALPWYMTRSQEILGTLDYPSTSSINGDTSGFGSGLSVASGLSDLNRTPVKEKD
AGSKSGGKVNILEDGAEVVIATIKEAQDVTSHMKKANGTNGSHPNLNFKANSAHSGNVSS
EQPQSRPHSAVGLGGVSSMQIGGDSPTSSHADSTPPQEHQEVCSCRTVYANCFSGDTEDG
ISFDEELTVYEFSRRTRPKPTGQTPVPSPTIPPPKPNILSLLRDNPRPLSTLSTASSELS
PLVSRPVSPTASYGGPLRSLTNKNYSGLKGGFASLRQDIDQLLLVLECGTLEQQQTLCQD
SKQAFIKVGPDLNHNGTEDGSSPATGSNCTGTSPIFMTEAERSLLQAEARRLASGCQRAT
RVGWAPDEALRSLSNSFSALVQLSAACLRTNSCAGCDFCHNASLVHGDEDNDSQQPMEKL
KEIVGLYREFVGAVETAGTGAKSVGVTGSGLGQGETDGVRLLAKRCTVLISSVFALTQLF
RTRTLESDTPGARVPLNF
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaggagcgatgtaggagcaggtctccagctcggagggcgagtcgagtgcag
caggtggtgggaacaataatacgccgcacgcgggactcactcagcagagagcggttgcta
ggcgatgggaggtcacagcgctccaacagtctgtccaatcagaacttccaggccaagctg
acactgcagatcacgagggacccggtcctggacagcagcaccggacatggcttcaccctc
accacaaacgcacccctgctggtcagggacatcgccacagggagtcctgcagatgggata
ctgtaccttggggaccaggtgctgcagattaatgatgcagtgctggaggatttgagcact
gagcaggtggaaaacatcttaaggaacctggaggactgtataaatgtgactatcctgcgc
cacatgacaaatcccaagtcgtccatcatgtcggcagagaagcgagcccgcctgaggagt
aatccagttaaagtgcgctttgcagaggaggtggtggtcaacgggcacactcagggaaac
tctcttctcttcctgcccaacgtcctaaaagtctatttagagaatggacagaccaaggcc
ttcaagtttgatggtaccaccactgtcaaggacattgttctcactctgaagaataaactg
tccatccgggccatcgagaactttgccctggtgctagagcagcagtacagcatcaccaaa
ctcctgctgctgcatgaagacgagcacatacagaaggtggtgcagaaaaaagactcccat
gattaccggtgtttgttcagggtgtgtttcatccccagagaccccgtggacctgctgcag
gacgacccctccacctttgagtacctcttcttacagagtgtggcggacgtgctgcaggag
cgcttcgcagtagagatgaagtgtaacacggcgctccgtctggccgcgctgcacatgcac
gagagactagacagttgtggacagaccagggcctctatcaagagcatcacgaaggagttt
ggcctggacagcttcatctctccaacactgctgagcaacatgagggagaaagacttgagg
aaagccatcagctaccacctcaaaaagatccagtccctgctcgagccacgtcagaaggta
atatctgcttctcaggctcggttggcctacctcactcagctgggagagctcatttcatac
ggaggacgatcttacacagctaccatgatgcttcaagacagggaggtgctggtcagcctg
ctggttggagctaagtatggaatgagtcagatcatcaaccacaagctcaacgtgatctcc
actctggtcgagttcagcagcatcagtcgagtggagttgctctcagagtctgacaaagtc
agcctgctgcgcatctcactgcatgacatgaagccatttgccttactgatggactctctg
gcagccaaagacttaggttgtctgctgggaggctactgcaaactcatggtggatcccaat
gtcaatgtcttccgtctggggcgcccaaaagtgagggtgcaccggattcctgctgaagaa
ggtgtgtgtgggaggttcggcgtaatagagggcgtgtgctatgaatccctatcaagttat
gtgtctcggtgctgcagtgactccgaggactcaacagatgaagacgacccaatggactcc
cagcgtccggaccctgcgagtcaggactgggaagagcgaaggagagaggaggaagagaag
cggagagaggaggaaaggaaagagagagaggagcaccaaggcagacaggaagtgaagata
atagtgacaacagaaggtaaggaaaatgaggacgaagaggaagcgggggcaacgggatgc
acgatacgcaaattcggtgtaatagatgaggaaatgaacctgggcaccacgtggtaccac
actgacccacgggtcaccagcagcttctccagcttgtccagtggctccttgagtgctgca
ctggaggaaagcagcgcctcagctaaagccccatctcacaaagatgcactccatggacac
tgcaccgtcgacgaccttccgggtttggacgtccaccacccctacctcttagagccaaaa
tgccaccagggccccctgcgacccaccaacctaaactaccggggcaatgacaattcatgc
ctttgctttgcggaactctccaagtctgacttcctgccgagtccgcccgaggctactagt
gatgatgaggaggatgacgatgaggagcaggaggagcagggagttgagggactccgacgc
atttccaagattcccagctcgagagatctgcggttgattgacagcacaccatttcaaagg
tcgccaattaggaaaaagaagaagaccccccccaaagtcccactgaggacaagttcaatt
ccagggcacaaagcaggagaagctgagcagcggctctccaaggatgaagagagtctatac
ctcactccttcacccaaccttaaaccagctcttttagccaaagagactgcttcggagtct
gaggatgagttttttgatgcacaagagagatttacacccccagttcctgatctttcagat
gctgaactggctgacaggcaaaatgctaacaggctaagtggaacctggaatgatgtttca
gttgccccggtgagagagtcttcttccccccttgccagtaaaacccaaacctcaaaaatc
aagaaggacgtggagacccttaaagggccaactaatcagctcaccaaccatcagtccagt
tcaccaaagcgatcacagaaacctgaagttaaagtcaaaccaccactggcacctaagccc
cagctgcttcccaaacctcagaatattcctcccaggtccccccagcatgggaaatcatac
gcccactgcaatggggatgcctctggacgtttgtcttcggaactcctggaaatggagcca
gacaccatggagttcaaatctgtcacgtctggtgccggtggactgcctctgatcacggca
gtccggtgcagcaagcaacccctgccggtcagaacaccacaaacagaggaaaagacaacg
ggagcacatgagaacggagctgatttggttgccaaacatgaagcgaacgtccctgataaa
aaggaaatggttaaagttgaaaggcaagccaatgggacttccatacgtgcaaacaagcca
ccaaacctattccccattcctccatctaattcaggtacaaagccagctgccccccctcca
gtgccaccgaaacctaattgttctactattcgccatcccctctcactacctgctagctcc
ccagtttctcctacagacccggacaaagggatcttcaaggaaagcataaatcccccaaat
ggaatccatccttggagcaaccgtaacggcagcatcccatcgggaccacggagggtctct
cagagccacgagagcctgtcgcccaaaaatacagatgcacctctctccattaccacctcc
cttaactctactaactctaaaggtgttgcaggcctccaaagcagagagccgggaagatcc
gattcggggtcagacctgaggaccagctcctccagcctgggagggaggctaccagcctct
gctctgagagggaaaatccaggctctgccatggtacatgacccgttcccaggagatatta
ggaactctggattatccctccacgagttccatcaacggagacacatctggctttggatct
ggattgtctgtagcaagtggtttatcagacttaaacagaacccctgtcaaggagaaagac
gcaggctccaaatcaggggggaaagtgaacatattagaggatggagctgaggttgtcata
gcaactatcaaagaggcccaggatgtgacctcacacatgaagaaggccaacgggacaaat
ggctcacatccgaatctgaacttcaaagcgaatagtgcacacagtggcaacgtttcatcg
gagcagcctcagtcgcgaccccactcagcagtgggattgggaggcgtgtccagcatgcaa
attggtggtgactcgccgacctcctcacatgcagacagtactccaccacaggagcaccag
gaggtctgtagctgccgcactgtctatgccaactgcttcagtggagacacagaggatggc
attagtttcgacgaggagctcactgtttatgagttctcgcgtcgcacgcggccaaaacct
accgggcagacgcctgtcccctctcccacaataccgcctccaaaacccaatattttgtcc
ctgctcagagacaacccccggccactctctacattatccactgcctcctctgaactcagt
cctttagtttcacgcccagtttcccctacagcctcttacggcggtcctcttcggtctctc
actaacaagaactacagcgggctgaagggaggtttcgcctcccttcgtcaagatatcgat
caacttctcctggtcttagagtgtgggacgcttgagcaacaacaaactttatgtcaagac
tcaaagcaggctttcataaaagtcgggccggacctaaatcacaatggaactgaagacggt
tctagcccagcaacgggctcaaactgcacggggacgagtcccatcttcatgacagaggcc
gaaaggagtcttctccaagccgaggctcgacggctggcgtccgggtgtcagcgggccaca
cgtgtaggctgggcccccgatgaagccttacgttctttatccaacagcttcagcgctctg
gttcaattgtccgctgcctgcttgcgaacaaactcctgcgctggctgtgacttttgccat
aatgcaagtctggtgcatggagatgaggacaacgacagtcagcagccaatggaaaagcta
aaggagatagtgggtctgtaccgagagtttgttggggctgttgagacagccggaactggt
gctaagagtgtaggcgtcactgggtctggactgggtcaaggggaaactgatggggtgaga
ctgttggccaaacgctgcactgtgctcatctcctctgtgttcgcgctcacgcagctcttc
cggacacgcacactagaatcggacacacccggtgcccgtgtacctctcaacttctga
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integrated database retrieval system
