Solea senegalensis (Senegalese sole): 122778858
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Entry
122778858 CDS
T07721
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen00061
Fatty acid biosynthesis
ssen00071
Fatty acid degradation
ssen01100
Metabolic pathways
ssen01212
Fatty acid metabolism
ssen03320
PPAR signaling pathway
ssen04146
Peroxisome
ssen04216
Ferroptosis
ssen04920
Adipocytokine signaling pathway
Module
ssen_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122778858
00071 Fatty acid degradation
122778858
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122778858
09143 Cell growth and death
04216 Ferroptosis
122778858
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
122778858
03320 PPAR signaling pathway
122778858
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssen01004
]
122778858
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122778858
Enzymes [BR:
ssen01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122778858
Lipid biosynthesis proteins [BR:
ssen01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122778858
Exosome [BR:
ssen04147
]
Exosomal proteins
Exosomal proteins of breast milk
122778858
Exosomal proteins of breast cancer cells
122778858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
GP120
Motif
Other DBs
NCBI-GeneID:
122778858
NCBI-ProteinID:
XP_043896901
LinkDB
All DBs
Position
LG12:20960054..20976931
Genome browser
AA seq
705 aa
AA seq
DB search
MLSQEFFHRLRLPDLEDVTQYMRTVSIPVVVSMGAAAAATAYCLATRPKALPSVFDLHMQ
SVELPGGEFVHRSLLQNGNGHLTHVFEDGRTVYESFLRGARVSNNGPCLGSRKPKQPYEW
LSYGEVMERTENLGSAFLHKGHSKTTDPHVGIFSRNRPEWTIAELACYTYSLVSVPLYDT
LGTEAISYIIDKAAISTIVCDVVDKVNLVLDCTEDRKHTVKTIVLMDTPSSDLSQTFQTL
VSRGRQAGIHILSLQEMEAIGKANHQQPVPPQSEDMAVICFTSGTTGNPKGAMLTHGNIV
SNTSAFIKMTETHYSFSTSDVHMSFLPLAHMFERVAQGVMLIHGAKIGFFQGDIRRLSDD
LNTLKPTVIPVVPRILNRMYDKIHGQASTPLKRWLLGFAYRRKEAELKKGIVRRDSIWDQ
LIFRKVQASLGGRIRVMITGAAPISPTVLTFLRAAIGCQFYEGYGQTECTSGCTMTTPGD
WSAGHVGAPLPCNSIKLVDVPEMNYLAINGEGEVCVKGTNVFQGYLKDPEKTAETIDADG
WLHTGDIGKWLPNGTLKIVDRKKHIFKLAQGEYIAPEKIETIYVRSDAVAQVFVHGDSLQ
SCLVAVVIPDPDFLSDWIKKTLGLEGSYQELCGRLDVKAAILESMLQLGKEVGLMSFEQV
KAIYIHTEMFSIENGLLTPTLKAKRNELRQHFRSQIEELYAGINM
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtcaggagttctttcacagactgaggttgccagatctggaggatgttactcag
tacatgaggactgtatctatacctgttgttgttagcatgggggcagctgctgcagccaca
gcctattgcctggcaacacgacccaaggccctcccttcagtctttgaccttcacatgcag
tcagttgagcttccgggtggagagtttgtacacagatcacttcttcagaacggaaacggt
cacttgacacatgtattcgaggacggcaggacagtgtacgagtcctttctccgaggggcc
agagtctccaataatggtccttgtctgggttccaggaaaccaaaacagccgtatgaatgg
ctgtcgtatggagaggtaatggagcgaacagagaatctgggttcagcatttcttcacaaa
ggacactccaagaccacagacccccatgttggcatcttctctcggaacagacctgagtgg
accatcgctgagttggcatgttacacctattctctggtgtcggtccctctatatgacaca
ctgggaacagaagccatctcctacattatagacaaagctgccatctccactatcgtatgt
gacgtggtagataaagtcaatctggtgctggactgtacagaggacaggaaacacactgtg
aaaactatcgtcctgatggatacaccgagttctgacctgagccaaaccttccaaaccctg
gtcagcagggggcgacaggctggaatccacatcctcagtttgcaggagatggaggccatt
gggaaggccaaccatcaacagccagtgcctccacaatctgaggacatggcagtcatctgc
ttcaccagcggaacaacaggaaatccaaagggagccatgttgacacatgggaatattgtg
tccaacacctcagcatttatcaaaatgacagagactcactattcatttagtaccagtgat
gtccatatgtccttcctgcccttggctcatatgtttgagagagtcgcacagggagtgatg
ctcattcacggtgccaagattggctttttccagggagatattcgtcgtctgtcagatgac
ctgaacacactgaaacccactgtgattcctgtggtgcctcgaatccttaacagaatgtat
gataagatccatgggcaggccagcaccccactgaagcgctggctgctgggctttgcctac
aggaggaaagaggcagagctaaagaaaggcatcgtaaggagggacagtatctgggatcaa
ctaatcttcaggaaggtccaggccagccttggtggtcgtattcgtgtcatgatcactgga
gctgctcccatctctccaactgttctaactttcctcagagcagcaataggttgtcagttc
tatgaaggttatggacaaacagagtgtacttctgggtgcacgatgaccacgcctggggac
tggagtgcaggtcacgttggagctcctctgccttgtaactcaattaaactggtggatgtg
cctgagatgaactatttggccataaacggagagggagaggtgtgtgtgaagggtactaac
gtgttccagggttacctgaaggacccagagaagacagcagagaccattgatgcagatggg
tggcttcatactggagacattggaaaatggcttcctaatgggacactgaagattgtggac
aggaagaagcacatctttaagctggcacagggggagtacattgctccagaaaagatagag
accatctatgtgaggagtgatgcagtggcacaggtctttgtacatggagacagcctgcag
tcatgtctggtagctgtggtgatccctgaccctgacttcctctctgactggatcaagaag
acccttggattggagggcagctaccaggagctatgtggcagactggacgtcaaagcagcc
atcttggagagcatgctgcagttgggaaaggaagtaggcctcatgtcctttgagcaggtg
aaagccatctacatccacactgagatgttctcaattgagaacggccttctcaccccgaca
ttgaaggccaagaggaacgaactgcgacaacacttcagatcccagatagaggagctgtat
gctgggatcaatatgtag
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