Solea senegalensis (Senegalese sole): 122778886
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Entry
122778886 CDS
T07721
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
KO
K16499
protocadherin delta 2
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122778886 (pcdh10b)
Cell adhesion molecules [BR:
ssen04515
]
Cadherins
Protocadherins
122778886 (pcdh10b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
122778886
NCBI-ProteinID:
XP_043896970
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All DBs
Position
LG12:19238945..19264032
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AA seq
1016 aa
AA seq
DB search
MIVLVLALCLADGALSQIRYSVPEEADHGTLVGNIAEDLGLDLTKLASRRFQVVPSSRSP
YLEVNLENGVLFVNEKIDREQICKQSASCQLNMEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYTVSLSE
NAPVGTLLIQLNATDLDEGLNGEVVYSFSNHISSRVKDLFSIDPRTGRIEVRGEVDFEES
SIYQIFVQAKDMGPNAVPAHCKVLVKVSDANDNAPEITFSTVTESVSEKAAPGTVIALLS
VTDRDAEENGQINVEILGDVPFKLKTSFRNYFTIVTDGPLNREQAESYSVTVVARDKGTP
PLTTSKSIRVQVSDENDNAPTFTQQIYDVYVTENNVPGAYIHAVTALDLDVGQNALISYS
ILECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQANDAGTPELSSNATVKV
IIVDQNDNAPVVLAPVGKNGTAREPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRIARRVSPKRDPHQLYDLLIEVRDHGQPPLSSSASVMVVLVDSVVE
GHGGADRGSSAKAKDGTLDLTLILIIALGSVSFIFLLVMIVLAVRCQKDKKLNIYTCLTS
ECCLSCSSCCSQQSRARKKKLSKSDIMLVQSAVNVSGASTAQVPVEESGSFSSHHQNQNY
CYQVCLTPESAKTDLMFLKPRSPSRSTDTDHNPCGAIVTGYTDQQPDIISNGSILSNEVK
HQRAELSYLADRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSSGADLFSN
CTEECKALGHSDRCWMPSFMPSDGRQGPDYRSNLHVPGMDSVPDTEVFESPEQTADVSFS
TFGKETPLSHQHLHHHLLQNHHLSHHSFLERKELEALLPSSRAPCNSAHLTRKRIC
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctcgtgcttgccctgtgcctcgcggatggagcgctttctcagattcgctac
tctgtgccggaggaggcagaccacggtaccttggtggggaatatcgccgaagacctgggt
ctggaccttaccaagctggcgtcgcgccgcttccaagtggtgcccagctctcgctcgcca
tatctggaggtgaacctggagaacggcgtcctgtttgtgaacgagaaaatcgaccgggag
cagatatgcaagcagagcgccagctgccagctcaacatggaggtgttcctggagaatccg
ctggagctgttccgtgtggaaatcgaggttgtggacatcaacgacaacccacccagcttc
ccggagacggacatcacggtggagatctcagagagcgccactccgggcacccgcttcccg
ctggagagcgcattcgacccggacgtgggctctaacgcattacgcacgtacgacatcacc
actaacaactacttctacctggatgtgcagacccaaacggacgggaacaagttcgcggag
ctggtgctggagaagccattggaccgggagcagcaggcggcgcacaggtacgtgctgacc
gcggtggacggcggtcagccgccgcggactggcaccgcgctgctggttgttaaagtgctg
gactctaatgataatgtgccagtttttgaccagcctgtctatacagtaagtctctctgag
aacgcaccagtgggcacgctgttaattcaactgaatgccaccgacctggacgagggactg
aacggggaagtggtttactccttcagtaaccacatctccagtcgcgtaaaggatctgttc
agcattgacccgcgcaccgggcgcatcgaggtgcgtggagaggtagactttgaggagagc
agcatctaccagattttcgtccaggccaaggatatggggccaaacgccgtccccgcgcac
tgcaaagtgctggtcaaagtctctgacgccaacgacaatgcgccggagatcaccttcagc
accgtcacagagtccgtgagcgagaaagcggctccgggcacagtgatcgctctcctcagt
gtgacagaccgggacgcggaggagaacggccagatcaacgtggaaatcctcggtgacgtc
ccttttaaattaaaaacctccttcaggaattatttcaccatagtgacagacgggccgttg
aaccgagagcaggcggagtcctactcggtcactgtggttgcgcgggataaagggactccc
ccactcaccaccagtaagtctatcagagtccaggtgtcagacgagaacgataacgcgccc
acttttacgcagcaaatctatgatgtgtatgtgacagagaataacgtgccaggggcgtac
atacacgctgtgacggccctagacttagacgtggggcagaacgcgctcatcagctactcc
atattagagtgtgacattcaggggatgtcagtcaaaacgtatgtgtcaatcaatgaagag
acaggatatctgtatgcactcaggtcttttgattatgagcagctgaaggatttcacgttc
atggtccaggccaacgatgcgggcaccccagagctttcctccaatgccacagtcaaagtc
atcattgtggaccagaatgataacgccccagtggtgctggcccccgtggggaagaatggc
acagccagggagccactgccccgctcggctgagccaggctacctggtgacccgcatagtg
gccatggacgcggacgatggcgagaacgcccggctgtcctacagcatccagcgggggaac
gagaatggcatgttcaggatggactggaggacgggcgagctccgcattgcaaggcgtgtg
tcacccaagcgagacccccaccagctatacgacctgctcattgaggtgagagaccatggc
cagccaccactgtcttccagtgccagtgtcatggtggtactggtggacagtgtggtggaa
ggccacggcggtgctgaccgaggaagcagtgccaaggccaaagatggcaccctggacctc
acgctcatcctcatcatcgccctgggctcagtctccttcatcttcctcctggtcatgatt
gtgctggccgtgcgttgccagaaggacaagaagctaaacatttacacgtgcctgaccagc
gagtgctgcctgagctgcagctcctgctgctctcagcagagccgggcccgcaagaaaaag
ctcagcaagtcagatatcatgctggtgcaaagtgctgtaaacgtgagtggagccagtaca
gcgcaagtccccgtggaggaatctggaagcttcagctcccaccaccaaaaccagaactat
tgctaccaggtatgtctgacaccagagtctgccaaaaccgacctcatgttcctaaagcca
cgtagtccgtctaggagcacagacaccgatcacaacccgtgtggggccatagtgacaggg
tacacagaccagcagcctgacatcatatcaaatggcagcattttatcaaacgaggtcaaa
caccaacgtgctgagctcagctacctggctgataggccgagacgtgttaacagttcggcg
ttccaggaggccgacctggtcagctccaaagacagtggccacggagacagcgagcagggg
gacagcgaccatgacgccactaatcgaggccattcctccggtgctgatctgttctccaac
tgcacagaggagtgcaaggctctgggccactcggatcgctgctggatgccgagcttcatg
ccctctgatgggcgccagggtccggactaccgcagcaacctccacgtgcctgggatggac
tctgtccccgacacagaggtatttgaaagcccagagcaaacggccgatgtgtcattctcc
acctttggcaaagagacgcctctcagtcatcaacacctccaccaccatctcctccaaaac
catcacctcagccaccacagcttcctagagaggaaagagttggaagctttactgcctagc
tccagagctccctgtaactcagctcatttaacgaggaaaaggatttgctag
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