Solea senegalensis (Senegalese sole): 122778947
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Entry
122778947 CDS
T07721
Name
(RefSeq) uncharacterized protein LOC122778947
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122778947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122778947
Membrane trafficking [BR:
ssen04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
122778947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
122778947
NCBI-ProteinID:
XP_043897048
LinkDB
All DBs
Position
LG12:complement(4598291..4611173)
Genome browser
AA seq
1449 aa
AA seq
DB search
MMSLIDLDDDQRWVPTHVNVTVLRARGLRTKGKHGSRYLYTIMQVAKEKFTTGLVEKAAV
PQWNEECCFELLPGILEEGGRGDYPPGSGDLVLTVMHRVLIGLDVFLGQTIIPLDRIFQE
GACPRDEWFKLNSKAGRKEKERGELQVTVQFTRNNMTASMFDLTMKDKPRSAFGKLKDRV
TGRKRGDVESSSAIVPGRYAALSGSVGQPFGDEGGGATEPQDVEVPEEKRSKVKDFFKGK
LRKSSDTRSCSSLASDSSMSSVASDNPGPPPSLDLLSDPPSSPIYTSKVRVDTHYGEADL
AKKVLTSQHTTKVLTHKRALSDEASKITTALPRTNPAVESLKGQTMTQSKSSLCINGSHV
YDSELSTPKSSGTLPSKLVLLEKCSPLSRSLQNLTKRSEDKGSFSEGRRWSFDKTRKEEK
EEEKAAAASFPQQSQTEGCPMQTTMPIVSSAIGSPEKGRKLRKTLFSGGRSESLPAKSDL
NQAAYTSEGRLRGWFGSSDSQNKPRLEVESSSDVPPHSLILPPQCSSPSGHVSPDDCSQS
HPFTPSNSPSSNPISPSNPFLPHIQRNPFFEELIAEESQRSPTFAPCSSSGSSPFHYTTL
PSEPHTPSLSLAKNATNIASIKRERPRPVARQISLPALLPKVPASNSPNHTAHRSMSESA
REWDDFFDAFASSRLNTPKGNLPQKRLRTSPTSSHGCSYPLNTVNHTQKLQTHEGQPPPL
PPRRLLRTSVNEIYSDGWLHRGQELAVHKEAYLLSQTGVASLQHGRNSVSPDLQAHSETS
DSLSLPPEQQTNVTTPGFTSEEKLKKFKYEPLEDEADRWGGMLFEQDLYGRLCRVNYGKP
VENNHLLSLNTKEIPGNNIALKNSTNKLLLDSENSVQDILNMSTTTSTSPNPEIKALDGT
SGPVEVAVESNPNETTCINNNVSFSLALGDLNMNVNNLDFGFIDSDGSSQSEVQDTLRSI
VSLDGNSSQPTDDSLTAVRHKETTPEDMFTLKDTYIPEMNSSFEITAATRKLCRVSPVCQ
GNCQECQHELTTFAPRGHSRVNGSEIAESSSLNQMSNSSSFKTEPSEDTMAGNDGFNKTQ
RDTDDNGNPQAKRATESFSGVVSARFRPKGLSRQNSGGSPSSQSKSGDKEFEQLLSLIQN
FSEVCEGPMSYQPTKSSVLPLDKHTDVHVVIDRTKTTSLKDDMSRLTKFCLTGKPSAISF
QDLHDKVAPDSRSPSKSKIGQSLQAPESCSPSIPSTLSLTTDAQAKLHPPPVCCPSINLS
NTTPHVGASTTLVVAPYTSCTSFSTTSTTDQPLVDARHSLLPEETQPANNLPHQESRTHP
VKPLTSSQSEKKEGRSVLEKLKSTIHPGRAAAHQAVAEAEKSQEATVDNSAQYQHLTNME
LISLLLQQEMDMQKQQAASHQQGAKLEKCESELKKVKAQVRDLEDYIDNLLLRIMEQTPT
LLQVRTRHK
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgttaatagacctggatgatgatcagcggtgggtgcccacgcacgtaaatgtc
accgtcctccgcgccagaggactgcgcaccaagggcaaacacggcagccgctacctctac
accatcatgcaggtggcgaaggagaagttcaccaccgggctcgtggagaaggcggcggtg
ccacagtggaacgaggagtgctgcttcgagctgctgcccgggatcctggaggagggaggc
cggggcgactacccaccggggagcggggacctggtcctcacggtcatgcaccgggtgctg
atcggactggacgtgtttctcggtcaaaccatcatcccactcgataggatattccaggag
ggcgcgtgtccaagagacgaatggttcaagctcaactccaaggcaggacggaaggagaag
gagcgcggtgaactccaggtgacggtccagttcactcgcaacaacatgacggccagcatg
ttcgacctcaccatgaaggacaagccccgctctgcttttgggaagctcaaggatcgagtc
acggggaggaagaggggcgacgtggagtcctcgtcggccatcgtgccgggccgatacgcc
gccctgtcaggatccgtggggcagccgtttggagacgagggcggaggagcgacggagccg
caagacgtggaggtaccagaggagaagaggagcaaggtgaaggatttcttcaaggggaag
ctgcgcaagtcgtccgacaccaggtcatgctcgtcacttgcttcagatagtagtatgtct
tccgtggccagtgataaccccggccctccgcccagtctggatctgctctctgaccctccc
agctcccccatctacactagcaaagtgagagtggacacccactatggagaggcagacctc
gctaaaaaagtgctcaccagccagcacaccacaaaggttctcacccacaagcgagccttg
agcgatgaagccagcaagatcacgacagcgctccctcggacaaatccagcagtggagtcc
ctcaagggtcagaccatgactcagtccaagtcgtccttgtgtatcaacggaagccacgtc
tacgactctgagctgtcgactccaaagagctcgggtactctcccgtccaagctggtcctg
ctggagaagtgctcgccgctctcgcgttccctgcagaacctcaccaagagaagtgaggac
aaaggttccttctccgagggccgccgctggtcctttgataagacaaggaaagaggagaag
gaggaagaaaaggcagccgcggcgtcgtttcctcagcaatctcaaacagagggttgcccc
atgcagaccacaatgccgatcgtctcctctgccattggttcacctgaaaaggggagaaag
ctaagaaagactttattctctggagggaggagtgagtcgctacctgcaaagtcagacctg
aaccaggctgcctacacatctgaggggaggctcagagggtggtttggctccagtgactcc
cagaacaagccaaggctggaagtagaaagcagctcagatgtaccccctcactcccttatt
ctcccccctcagtgctcctctccctctggtcatgtctcacctgatgactgcagtcagtct
catcccttcactccctccaactctccttcctcaaatcccatctccccctccaatcctttc
ctcccacacatacagcgcaaccccttctttgaggagctcatagcggaagagtcacagagg
tcccctacctttgccccctgctcctcttctggctcatcccccttccattacaccaccctg
ccctctgagcctcacacgcccagcctttctctagctaagaatgctacaaatattgcttct
atcaagcgggagcgccccaggccagtagccagacagatatctctccctgcgttattacct
aaagtacctgcatccaactccccgaaccacacagcccatcgatccatgtcagaaagtgca
agagagtgggacgacttttttgacgcttttgcctcaagcagactcaatacaccgaaaggg
aatcttcctcaaaaaagactgagaactagtccaacatcatctcatggatgtagttatcca
cttaatacagtaaatcacacgcaaaagcttcaaacacatgaagggcagcctcccccttta
cctccaaggaggttgttaagaacttcggtgaatgagatttactccgacgggtggctgcac
agaggtcaggagctggccgtccataaagaagcctacctcctctcacagaccggcgtggcc
tcactacaacacggaagaaacagtgtctctccagaccttcaagcgcacagtgagacctcg
gactccctcagtcttccccccgaacagcaaacaaacgtcacaacaccaggattcacctct
gaagaaaagctcaaaaagttcaaatatgaacctttagaagatgaagctgaccgctgggga
gggatgctgtttgagcaggatttgtatggacgcttgtgcagagtaaactatggaaaacct
gtagaaaacaatcatcttttgtcattaaacacaaaggaaattcccggaaataacattgca
ttaaagaactccacaaacaaattgctacttgatagtgagaactctgttcaagacattttg
aacatgtctactactacttccacttcccctaacccagagataaaggcactagatggtact
tctggtccagtagaagtggcagttgagtctaatccaaatgaaaccacatgtatcaacaat
aacgtgtctttctcattagcgttaggagacctgaacatgaatgtgaataacttggacttt
ggatttattgattcggacggctcctctcagtccgaggtacaggatactctgagaagcatt
gtcagtttggatgggaattcctcacaaccaacagacgactcactgacagctgttcgccac
aaggagaccacacctgaggacatgttcacgttaaaggacacctacataccagagatgaac
tcctcttttgaaataaccgctgctacgcggaaactgtgcagagtgtctccggtttgccaa
ggcaattgccaagaatgtcaacacgagcttactacgtttgcaccacggggtcactccagg
gtaaacggcagtgagattgctgaatcatcatctctaaatcaaatgtctaactcatcgagc
tttaaaacagaacctagtgaagatacaatggcgggcaacgatggttttaacaagacacaa
agagacactgatgataacggcaacccacaagctaagcgagccacagagtcattttccggg
gtggtgagcgcacgttttagacctaaaggcctgtccagacagaacagcggcggcagccca
agcagccagagcaaaagtggagacaaagagtttgagcagcttttgtccctcattcaaaac
ttctcagaagtctgcgaggggccgatgtcatatcagcccaccaaatcgtccgtgctgccg
ctagataaacacacagatgtgcacgtcgtcatagacagaaccaaaacaacgtctttaaaa
gatgacatgtctcgcctcacaaagttctgtttaacgggaaaaccctctgcgatcagcttt
caagacctccatgacaaagtagcgccagactcaagaagcccttctaagtcaaagattgga
caatctttgcaagcgcctgagtcctgctctccctccatcccctccacactctccctgacc
actgatgctcaggctaaactccaccctccccctgtctgttgcccctccattaatctctca
aacacgacgccccatgttggagccagcactacactggttgtggccccctacacctcctgc
acctccttctccaccacctccaccactgaccagcccctggtcgatgcaaggcactcactt
ttgcctgaggagacacaaccagctaacaacctgccccatcaggagagcagaactcatcct
gtgaagccactgacctccagccaatcggagaagaaggagggccgctcggttctggagaag
ctcaagtccacgatccacccgggacgtgccgctgcacaccaggccgtagctgaagctgag
aagagtcaggaggcgactgtggacaactctgctcagtaccagcacctgaccaacatggag
ctgatctccctgctgctgcagcaggagatggacatgcagaagcagcaagcggcctcccac
cagcagggggcgaagctggaaaaatgtgagagcgagctgaaaaaggtcaaggcacaggtc
cgagacctggaggactacatcgataaccttttactgcgcatcatggagcagacgccgacg
ttgcttcaagtgcgaaccagacacaagtga
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