Solea senegalensis (Senegalese sole): 122779001
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Entry
122779001 CDS
T07721
Name
(RefSeq) UV-stimulated scaffold protein A-like isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
122779001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122779001
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
122779001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
Motif
Other DBs
NCBI-GeneID:
122779001
NCBI-ProteinID:
XP_043897120
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Position
LG12:complement(782..25957)
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AA seq
782 aa
AA seq
DB search
MELSHRQRLSELVEELTTSGQPQLNQDKMKEIKKICKVSNDCVDHLYHLVMSQLNEDHCE
VRLSAFQITTELFSRSHHFRTRLVDNFQEFMELTVEIDSDQPLPPPKEVARKLRSLAIQT
VQSWQVSYGTAYKKLALGYHFLKQVKKVDFQDAEARTVAERRREEERQRRMERIYKEKVE
AATKDMEESYQEMEATLTEMESCMRLLFPDFELTDIQTVVSSSSSSSSSNCQPANKCPSD
DEQPCCSKDLRDFGKDGIKQEVEESREEMKSTGTENTGEEKDERLIKNKEERSRMEETKG
NNQQDEQKKKGGKVEDEEEESEEEESSEEEEEEEEEENVYENLFIRSSGLISHAYSLDLN
LSPGLHVKENEDNEAVVSTVIDLHKLITTKHLPAVLGWVQVFTKAGAEQQLLRRALDLKT
SLEAALQKHQELNIDYKSRMRKVVKASSDGDDDDEEDDDFDEVPEKEGYEPHIPEHLRAE
YGLDPTPSTSTAPVIRKPPAKRPAAPPPQASSSSSSRHMKRLRDEEQDPTCAAATLRVLK
QKHPSPVEPSSSSSSRNSSLNPNSSQSSSDKKSADAPVVPFGLDLYYWGQKQPNAGKIIK
AASQHQFWVPIDVEEEVENEQLLAESRSRYISFPGNFTPVSHYCKAPLGNGTLCQRQDRQ
KCPFHGRIVPRDEEGRPCRQEDRVREEQEERKRREEQPDWRDPELLRDIEAVTGEDLGSD
RVGKKRKGKKKKFPNLSDLKQRSNTARSRLERKVFNKYVIYPPSYHCHQPVSTAVYVDIQ
SL
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggagttgagtcaccgacagcgtctgtccgagctggtggaggagctgaccacatcagga
cagccgcagctcaaccaggacaagatgaaggaaatcaaaaagatctgcaaagtgtctaat
gactgcgtagatcacctgtaccacttagtgatgtcccagctgaacgaggatcactgtgag
gtgcggctgtcagccttccagattaccactgagctcttctccaggtcacaccactttagg
acacgactggtggacaacttccaggagttcatggagctgacggtggagatcgactcagat
cagcctcttcctcctcctaaagaagtggcccggaagctcaggtcactggcaatccagact
gtccagtcgtggcaggtctcttatgggacggcttataagaagttggcgctgggctatcac
ttcctcaaacaagttaagaaggtggacttccaggatgctgaagccaggacggtggcagag
aggaggagggaggaggagagacagaggagaatggagaggatctacaaggagaaggtggag
gcagctacaaaagacatggaggagtcgtaccaggaaatggaggcgactctgacagagatg
gaatcctgcatgaggctacttttccctgattttgaactcacagacattcaaacagtcgtc
agcagcagcagcagcagcagctcttcaaactgccaaccagccaacaaatgcccatcagat
gatgaacagccctgttgtagcaaggatttgagggattttggtaaagatggaataaaacaa
gaggtcgaggagagcagggaagagatgaagagcaccgggacagaaaacacaggagaagaa
aaagacgaaagattgataaagaacaaggaggagaggagtcgaatggaagagacaaaaggg
aacaatcaacaagatgagcagaagaagaagggaggcaaggtggaagatgaggaagaagag
agtgaggaggaggaaagtagtgaagaagaagaggaggaggaggaggaggagaatgtatat
gaaaacttgttcattcggagctcggggctcatttctcacgcttacagtctggacctgaac
ctcagtcctggtttgcatgtgaaggagaacgaggataatgaagcagtggtttccacggtg
atagacctccacaaactgataacaaccaaacacctaccagctgttctgggctgggtgcag
gtcttcaccaaagcaggtgcagagcagcagctgttgaggagagcactggatctgaagacg
tctttggaagctgcgctacagaaacatcaagaactgaacatcgactataagagcaggatg
cgcaaagtggtaaaggcttcgtcagatggagatgacgatgatgaggaggatgatgacttc
gatgaggtcccagagaaagagggatatgagcctcacattccagagcatctgagggcggag
tacggtttggatcccactccttccacctcaacagcacctgtcataagaaaacctcctgca
aagagacctgcagctcctcctcctcaagcctcctcctcctcctcctccaggcacatgaag
cgactcagagatgaggagcaggatccaacctgtgcggccgccacgctgcgtgtcctcaaa
cagaagcatcccagtcctgtggagcccagcagcagcagcagcagcaggaactcctcattg
aatcccaactcatctcagtccagttcagataagaagtctgccgatgctcctgtggttccc
tttggtttggacctgtactactggggacagaagcagcccaatgccggcaagatcatcaaa
gctgcctctcagcatcagttctgggttcccattgatgtggaggaagaggtggagaacgag
cagctgctggcggagagcaggagcagatacatctctttccctggtaacttcactcctgtc
agccattactgtaaagctcctctcggtaatggaacgctgtgtcagcggcaggacagacag
aagtgtcctttccacggccggatcgttcctcgagacgaggagggccgaccctgcaggcag
gaggaccgcgtcagggaggagcaggaggagaggaagaggagagaggagcagcctgactgg
cgagacccagagctgctgcgagacattgaggctgtgacaggagaagacctgggttctgac
cgagtgggtaaaaaacggaaagggaaaaagaagaagtttcccaacctgagtgatctgaag
cagaggagcaacacggctcgctccaggctggagaggaaagtgttcaacaagtacgtcatt
tatccaccgagttatcactgtcaccaacctgtgtcaacagcagtctatgtagatatacag
agtctataa
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