Solea senegalensis (Senegalese sole): 122779325
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Entry
122779325 CDS
T07721
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122779325 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122779325 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122779325 (vps36)
Membrane trafficking [BR:
ssen04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
122779325 (vps36)
Exosome [BR:
ssen04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122779325 (vps36)
Exosomal proteins of colorectal cancer cells
122779325 (vps36)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MA3
TssO
Motif
Other DBs
NCBI-GeneID:
122779325
NCBI-ProteinID:
XP_043897454
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Position
LG13:22106771..22111998
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AA seq
383 aa
AA seq
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MDRFSWSSGLLEINETLVIQQRGVRLYDGDDKAKLDVGAALLSTHRLIWRDVKNHECCLA
MPLSQIIYFEEQAAGIGKSAKIIIYLHPTPANKEPGPYQHSKYSYIKLSFKEHGQIEFYR
RLTEEMTQKRWESTPVSQPIPTGSATQTGKTRAVGIVGIERKIEERRKETDKNISEAFED
LSKLMVKAKEMVELSRSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHLQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLLNACKMFESLKLP
VRMRVFDSGVMVVQLQSHSEEEMIASALDSVTDKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLFE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtttttcgtggtcaagcggactcttggaaataaacgaaaccttagtaattcaa
caacgaggtgtgagactgtatgacggcgatgataaggccaagctggatgttggagccgcc
ttgctgagtacccatcggctgatctggagggacgttaaaaatcatgaatgctgcctagct
atgcccttgtcacagatcatctactttgaagaacaggctgcaggaatagggaagagtgca
aaaataattatttacctgcatccaacacctgccaataaggagccaggtccttaccaacac
agcaagtactcctacattaagctgtcctttaaagaacatggacagattgagttttacagg
aggctaacggaagaaatgactcaaaagagatgggagagcacacctgtttcacagcccatc
cccacaggatctgccactcagacaggaaagacccgtgcagtggggattgtcggcatcgag
aggaagatagaggagaggaggaaagaaacagacaaaaacatttcagaggcctttgaggac
ctcagtaagctgatggtcaaggctaaggagatggtggagctgtccagatctatagccaac
aagatcaaagacaagcagggagacataaccgaagacgagacgatccgttttaagtcctac
ctcctgagcatgggtattgctaaccccgttacaagggaaacacatggatcgggcacacat
taccacttgcaactggctaagcaactgggagacatgctgcaggcccctctggaggagcgt
ggcggcatgatggctctcactgaggtttactgtctggtcaaccgtgcgcgagggatggag
cttttatctccagaagatttgctaaatgcctgcaagatgtttgagtcactgaagctccca
gtgaggatgcgtgtgtttgatagtggtgtgatggtggtgcagctgcagtctcacagtgaa
gaggaaatgatagcctcagcacttgacagtgtgacagataaaggttccttgactgcagag
gagtttgcaaagctcttgggtctttctgttcttctgtctaaagaacggttgttgctggct
gagaagatgggtcacctgtgtcgagacgactccgtggagggtctgagattctaccctaac
ctctttgagtag
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