Solea senegalensis (Senegalese sole): 122779357
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Entry
122779357 CDS
T07721
Symbol
gabra6b
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04080
Neuroactive ligand-receptor interaction
ssen04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122779357 (gabra6b)
04082 Neuroactive ligand signaling
122779357 (gabra6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122779357 (gabra6b)
Ion channels [BR:
ssen04040
]
Ligand-gated channels
GABA-A
122779357 (gabra6b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
HVO_1552_C
Motif
Other DBs
NCBI-GeneID:
122779357
NCBI-ProteinID:
XP_043897509
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All DBs
Position
LG13:20908207..20925673
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AA seq
477 aa
AA seq
DB search
MLIVKVEQGFLVVGCLRGMAFVLTCLFLSCYSVNSAWGHSDTSIYLDNITRILDRLLDGY
DNRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFEGPIEILRL
NNLMVSKIWTPDTFFRNGKRSISHNMTTPNKLFRIMQNGTILYTMRLTINAECPMRLMNF
PMDGHACPLKFGSYAYPMSEIVYTWKKGPLSSVEVPQESSSLLQYDLIGQTVSSERLQSN
TGEYVIMTVHFHLQRKMGFFLIQTYIPCIMTVILAQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFSTLQANRELRKAAAMK
AAAQEAAAAAAAGAPPPAATGNDGEVSSTDATSVLKKRMNSAPVFDRPAKTFPNPPVNAQ
AFLQQGSAVPANNVLTGTSIIDKYSRILFPLSFGAFNLVYWIVYLTKDTMEMSRDTV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgctgattgtaaaagttgagcagggatttctagttgtggggtgtttgcgaggcatggct
ttcgttttaacttgcttattcctgtcatgttatagtgtcaacagcgcatggggacacagt
gataccagtatctacttggataacatcacgcgtatattggatagattactggacggctat
gacaacaggctgcgacctggatttggaggtccagttacagaggtcaaaactgacatcttt
gtcaccagctttggacccgtttcagatgtggagatggaatacaccatggacgtgttcttt
cgtcagacatggattgacgaacggttaaaattcgagggccccatcgagatcctgcggctc
aacaacctgatggtcagcaagatctggacgcctgacacttttttccggaatggcaagagg
tcgatctctcacaacatgaccacccccaacaagctgtttcgcatcatgcaaaacggaacc
atcctctacaccatgagattaactataaatgcagagtgtcccatgcgtctgatgaacttc
ccgatggatggccatgcctgcccgctcaagtttgggagttatgcataccctatgagcgag
attgtgtacacgtggaagaaaggacctctctcttccgtcgaggtgccacaggaatcctcc
agtctgctgcagtatgacctgatcggtcaaacggtgtcaagcgagagactgcaatccaat
acaggtgaatatgtgatcatgaccgtccacttccacctacaaaggaaaatgggcttcttc
ctgatccagacgtacattccctgcatcatgaccgtcatcctggcccaagtctctttctgg
attaataaggaatcagttccagctcggactgtgtttggtatcaccactgtcttgaccatg
acgacactcagcatcagcgcccgccactccctgcccaaagtctcgtacgccacagccatg
gattggttcatcgccgtttgcttcgccttcgtcttctccgccctgattgagtttgcagcc
gtcaactatttctccaccctccaggccaacagggagctgcggaaggcggcggcgatgaag
gcggcggctcaggaggcggctgcagcggcggctgcaggagcacccccacctgcagccacg
gggaacgacggcgaggtttcctcaacggatgccactagtgtgctgaagaagaggatgaac
tctgcgccggtgtttgaccgtcctgccaaaacattccccaacccacctgtcaatgcccaa
gccttcctgcagcagggttcagctgtaccggccaacaatgttctgaccggcaccagcatc
atcgacaaatactcccgcattctctttcccctttcatttggcgccttcaacctggtctac
tggatcgtctatctcactaaggacaccatggagatgtccagagataccgtctga
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