Solea senegalensis (Senegalese sole): 122779450
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Entry
122779450 CDS
T07721
Name
(RefSeq) F-box only protein 40-like
KO
K10315
F-box protein 40
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122779450
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122779450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Sina_ZnF
Motif
Other DBs
NCBI-GeneID:
122779450
NCBI-ProteinID:
XP_043897745
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Position
LG13:complement(2142448..2148244)
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AA seq
700 aa
AA seq
DB search
MSHRSRASKVRQHVHCESCYSRRCRARVEVSVSCSITSCRLHCGALFHLCKEEDHLLLCP
NVRVPCLNAGYGCPVQMPRSSQAGHLKVCPASVVCCTMDWLRWPTDETHPHSNIALQEKV
LKENDGQVKALDLAMALVDQSDLFSRLKMRPLYPELMDKEEEAEEEKKREEEKKEKIAVG
GFVSDIPNNGANEDLVTSVSAENSSYANQAEETVQPNVSQKAVIDKDKYNLFEMMFSMER
GACEVAQQNLNHPKQAGEKVGSDTNERPVMETNAAEDGEHCPQLDTSKTGHAPWQEGVLD
RLREDLTPQEYNMYIVHHGRMLVSFGQIAACTPREKDFVYGSLEPIPVQTLRSFKIPDSY
HYRQRAHLYDAAARAQSETRSVDTSDLGASEEDWFSDEATTTLLGYAEEEVMGHKISETK
AIDGLYIDIGTQTHAFHSAPFKRKTTLAEVTVDKPVKLHLQLQAESVNSRHSRATCVFTF
LCGHTFHRREFATHFRNVHSEIQTCLSGWFEQRCPLAYLGCTYSRRRFQPSTHDATVTYD
QQLRSFNLRPTVVTSSGNDSQTAGGKDKLSSLPYEVLCHMATFLDSLSLSQLALVSRLMR
QVCSSLLQDRGMVTLRWERKTESHGGAKWRAKPVWEFSRLFSSVDLWQMADAPPISAHLK
VCPYYETRVHSEPVPLPSMSDKHKCSQERMSLVNLFKSNQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcgctcccgagcctccaaggtgcgacagcatgtccactgtgagtcctgctac
agccgccgctgcagagctcgggtggaggtctctgtgagctgctccatcacctcctgccgc
ctgcactgtggagctctcttccacctgtgcaaagaggaggatcacctgctgctctgccct
aacgtgagggtgccatgtctcaacgctggctacggctgtccggtccagatgccccggtcc
tcacaggccggtcacctcaaggtgtgcccggccagcgtggtgtgctgcaccatggactgg
ctccgctggccaactgatgagacacacccacacagcaacatcgccctgcaggagaaggtg
ctgaaggaaaatgacgggcaggtgaaggctctggatttagccatggccctggtggatcag
tcagaccttttcagtcgcctgaaaatgaggcccctctatccagagctgatggacaaagaa
gaagaagcagaggaagagaaaaaaagggaagaggagaagaaagagaagatagcagtggga
ggttttgtcagtgatatccccaacaatggtgccaatgaagacctcgtcacgtcggtctca
gcagagaacagttcttacgccaatcaagctgaagagaccgttcagcccaacgtcagccag
aaggccgtcatcgacaaagacaaatacaacctgtttgagatgatgttcagcatggagcga
ggggcctgtgaagtcgctcagcaaaacctgaaccaccccaaacaagccggtgagaaggtt
ggcagcgatacaaatgagaggccagtgatggaaacaaatgcagcagaagatggtgaacac
tgtcctcaactggacacaagtaagacaggacatgcaccgtggcaggagggagtgctggac
cgtctgagagaggatctcaccccacaggagtacaacatgtatatagtgcaccacgggcgt
atgctggtctcctttggacaaattgcggcctgtacaccgagggagaaagactttgtctat
ggcagcctggagcctattcctgtccagaccctacgctctttcaagatccctgacagctat
cactacaggcagcgcgctcatctgtacgacgcagcggcgagggctcagagtgaaactcgc
agtgtcgacacatcagacctcggtgccagcgaagaggactggttcagtgatgaagccacc
accacactgctgggctatgccgaggaggaggtcatgggtcacaagatcagtgaaacaaag
gcaatcgacggcctctacattgacatcggaacgcagacgcacgcgttccactcggcgccg
ttcaaaaggaagacgaccctggcggaggtgacggtggacaaacctgtgaagctgcaccta
cagctgcaggcggagagtgtgaacagcagacacagcagagccacctgtgtcttcaccttc
ctctgcggtcacaccttccaccgcagggagtttgccacacacttcaggaacgtccacagt
gaaatccagacgtgtctgagtggatggttcgagcagagatgcccactagcatatctgggt
tgcacctacagccggaggaggttccagccgtccacacatgacgccaccgtcacctacgat
cagcagctgaggagtttcaacttgcgtccgaccgtggtcacctcgtcaggtaatgactca
cagacggcaggagggaaggacaaactgagctcgctaccctatgaggtgctgtgccacatg
gccactttcctggacagtctgtccctgtcccagctggctctggtgtcccgcctcatgagg
caggtgtgctcctcgctgctgcaggacagggggatggtcaccctgcgctgggagaggaag
actgagtcacatggaggcgccaagtggagggccaaacctgtgtgggagttcagtcgactc
ttctcctcagtggatttgtggcaaatggccgacgctccacccatatctgctcatctcaaa
gtctgtccttattatgagacccgggtgcacagcgagcctgttccgctccccagcatgagt
gacaaacacaagtgcagccaagagagaatgagtctcgtcaacctttttaaaagtaaccaa
taa
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