Solea senegalensis (Senegalese sole): 122779456
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Entry
122779456 CDS
T07721
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM63-like isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122779456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122779456
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122779456
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-B_box
RING_XB3-XBAT31
zf-C3HC4
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Sina_RING
Prot_inhib_II
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-GeneID:
122779456
NCBI-ProteinID:
XP_043897805
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All DBs
Position
LG1:complement(20324553..20333469)
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AA seq
440 aa
AA seq
DB search
METLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNPYLSTRSSSTVTSGGRF
RCPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQDSTSKASPQVKVEQPMCEEHEEEKIN
IYCVTCSAPTCSLCKVFGAHKDCEVAPLNTVFTKQKAELTDCISMLVGNNERIQAIISHL
EETCRTVNENGSRQKSKLCETFDHLFAVLEEKKGEMTVKISSEQEEKLDYIRGLRRKYNE
HLENTAKLLETSIQTMDETEMAVFLQTSKPLLHKIMEGTNTSQLDKLQRGYEKMDHFTTN
VDRQRRALSDIDFVKADEDGDDDEEEVEPRVTSAGSRSESKQQVAANQPPPVLAAQVSAP
PPQRTSEMASHTKSPAPSPLSQVPPPLPIVTASPAPSPLSQVLPPVTASPAPQVQSDQQS
ELDDRDGPRHVFSFSWLNQK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagactctggaaaagcagctcatctgtcccatctgtttggagatgttcaccaaacca
gtggtcattctgccgtgtcagcacaacctgtgccgcaagtgtgccaacgacatcttccag
gcatccaatccctacctgtcgaccaggagtagctccacagtgacatctggtggtcgtttt
cgctgcccgtcctgtcgacatgaggtggtcctggaccgacacggtgtttatggtctgcag
cgcaacctgctggtggagaatataatagacatgtataagcaggacagcaccagtaaagcg
tctcctcaggtgaaagtggagcagcccatgtgtgaagaacatgaggaggagaagatcaac
atctactgtgtcacctgcagcgcccccacctgttcactgtgtaaagtgtttggagctcac
aaagactgtgaggtggcaccactcaacactgtgttcaccaaacagaaggctgagctgact
gactgtatttcgatgctcgttggaaacaatgagaggattcaggcgatcatcagtcacctg
gaggaaacctgcagaactgtcaacgagaacggcagcagacagaagtcaaagttgtgtgag
acgtttgatcacctgttcgctgtcctggaggagaagaaaggtgagatgactgtgaagatc
agctctgagcaggaagagaagctggactacatccgtggcctgaggaggaaatacaacgag
cacctggagaacacggccaagctgctggagacgtccatccagaccatggacgagactgaa
atggctgtgttcctgcagacgagcaaacctctgctgcacaagatcatggagggaaccaac
acgtcacagctagataaactccagcgcggctacgagaagatggatcacttcacaacaaat
gttgatcgtcagagacgagcgctgagcgacatcgactttgtcaaagcagatgaagatggt
gatgatgatgaagaggaggtggagcccagagtgacatcagcaggaagtagatcggagtca
aagcagcaagttgcagccaatcaaccacctcctgtgttagctgctcaggtctcagccccg
cccccacagagaacctcagagatggcatcacatacaaagagccccgccccatcaccactc
agccaggtcccaccccctctgcccattgtcactgccagccctgccccctcaccactcagc
caggtcctgccccctgtcactgccagccccgccccccaggttcagtctgatcagcagagt
gagttagacgacagagacggacccagacacgtcttttccttcagctggctcaaccagaag
tga
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