Solea senegalensis (Senegalese sole): 122779534
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Entry
122779534 CDS
T07721
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04510
Focal adhesion
ssen04512
ECM-receptor interaction
ssen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122779534 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122779534 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122779534 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_II
Laminin_G_3
Laminin_I
Hepar_II_III
Motif
Other DBs
NCBI-GeneID:
122779534
NCBI-ProteinID:
XP_043897935
LinkDB
All DBs
Position
LG1:complement(970402..991378)
Genome browser
AA seq
3074 aa
AA seq
DB search
MKLLLLLFLLEQTSAQQRGLFPAILNLASNAIISSNATCGDPDPEVYCKLVDHVPGRKIR
NSHCPKCDANSVLSKERHPITNAIDGTNQWFQSPSIKNGRQFHWITISLDLKQIFQVAYI
IIKAANSPRPGNWILERSLDGVTFEPWQFYAISDTECLTHYNVTPRLGPPTYKRDTEVIC
TSYYSRLNPLEHGEIHTSLINGRPGADDLTSDLLNFTSARYIRLRLQRIRTLNADLMTLS
THDPQDIDPIVTRRYYYSIKDISVGGMCICYGHAKSCPLDPVTKKLHCVCEHNTCGENCN
ECCPGYHQQPWQPGTISDGNTCEKCNCHNKTFECFFNQTVAKLSLSLDSAGVRRGGGVCV
DCQQNTDGVNCETCRDGYYRPEGVSPYSESPCVKCNCDVRGSSSSVCVKDDKKQSGQCVC
LQGFTGRQCDRCAFGYRDFPRCVRCECNLSGSTNSDPCRRCSCKLNVMGAHCDLCKPGFF
NLHKNNPLGCSDCFCFGVSDVCESSTWSTAQVYHKDAWLRPAESLLSPAAIHDNDLIPSN
ASSGHTHQLLSWTAPTNFLSNKLVSYGGYLKYSVIYDIPFDNEDRSLPAYSDVIIEGNGE
GVRLSPRVPVLLSPLAEHSVAVAIVPQHFVHDQTGVDVTRDVLLSVLTNVTSLRVRVHLD
VPADKLIRLRSVSLDVADSGSDSGIQAVAVETCECPWGYSGTSCESCLPGFYRVGGVMFG
GNCMQCECNDHAVECDMDGVCLECEHNTTGPHCDHCLPGFYGDATEGTTHDCQPCPCPLT
EPSNSFSPTCVLATSGQVSCDQCQVGYTGVNCERCATGYYGNPQVVGGTCVRCECNGNVD
VTKAGHCDTVTGECLHCLGNTTGRHCEVCQPGYYGDAVQAKDCQECGCDVSGAISSVCNV
TTGHCSCQENVTGRTCDMCQMGFFGLRSGRGCSACNCSQSGSVSVTCDEDGQCQCVSGVG
GDKCERCSRGYYGYRQSGCTACTCDHTGGNCDPESGECVCPAHTEGDTCDRCEIGYWGHD
LNTGCKPCSCSTAGSSSPQCDITNGQCQCKEGFSARSCDQCVPGYHGYPACSVCGCDSAG
TDERFCNSTLGVCDCEHGGVCVCKVGVAGRHCEECVSGWFGLSSMNPHGCSQCFCSGLSR
DCEERGGVYRRQVTLARSPSLLTVVSQYNLQGLVSGVYQQGGDMLLDTRQVDLSRLTGPL
YWRLPPQFEGDQLMSYSGLLSYSVTFFAEDGSGLSNQEPQVMMRGGTLKKHVIYTDMVAP
SNGIKTQHNIRMTEYKWKYFNSVWEESVSHEDFMSVLSNVQYVIIKASYGTRLQQSRISN
ITMDTAVEEESEEESDVIGAVARFIESCICPLGYKGLSCQECALGYFRQPWSELSSQRQT
SMVVRPCVQCRCNNHSETCDSETGECQDCQHHTSGQRCELCAPGYHGKVSGSISDCSLCA
CPLRDNSFSSTCVSEGAFGDFRCTSCQTGYEGRYCERCSVGYYGNPSVHGGRCFSCTCSG
WGSLHPLCDTVTGQCECKAGVKGQSCERCDERYILDGGECVLCEDGCVDVLLDDLDKLHN
VFVSANVSGISMAPYGQLVALENQTRGSSQFMFSQNNSVMFRLSRVDDDLDHVTSELSTL
LRQVTHLSDHMEEVDVSTNTSLSQGALLLRNIGRLQERILVLQSQAYHVTQTAGEEFDSA
NQTHLLDELQVMLETMRGINVAAASATADQELSLSQSLWNSLHVDFMSSRAARNIRLHGL
AASLTVHMEALQHISAHLDHAEDKNTHTHTLLQSTHTLLQQHKAVCQSLSVAYVSVDAVM
EDAQLLLDDVFSLVDELTNTSAQVELMGGQLDQWHPLLRKQVDNLVVGLKRTDALENVYK
AESHANLLQNYALSVHSSLSSVCNGSQNGRQLFQLDGDITQQVDFAQQLASLAQVSSSCA
LNMSVQSEQLLSEETRDKLNVSNTVLHQSQQLHQTVEDLQLNISMVTSSLRLVRESVQNS
SLLLHQPIRELQSLHGSSKSLRLAQLQTTAAHSGLQMVLQQMQRLSDQLQDSSSVVENTI
DTVRDTNELVMQTRAAANEAQSKLEEAEQRTEHLIERIKPLSILGEKLGRNLSDIRELID
QARRQAASIKVAVQVDRDGDCVRSYRPEIQSSHFNSLSLVLKTTTRQNLLFYLSSNTTVD
YLAAEMHDGKVSLVWNLGSGTSRLDFPELDIANNKWTRINATRFGTHVSLSVHRLESETH
PLPAVTSSSPGSSRVLDIDRNSVIHIGGLGAHTQSTAALRSTTFQGCLSEASLNERNIGL
WNYDSREGQCGGCFSSPQTEETSFHFDGSGFSVVQKSLRATSTSIVLLFKTLSPGGLVLY
LASNNTRDFLSIELVEGRVRLTFDLGSGALTLTSNRKYNSGVWYKITLQRNKRKVYLSIM
AADQSSEKEVLEGESPGTASDLNRSDLDPIYIGGLPVSRPIRRQVVSRSYVGCIKNVEIA
RSNFDLLRDAFGVRKGCVVKAVRSVSLLNTGFVQIPPTSLGREAELLFSFSSNNQSGILL
AGFSSDKQHFLSVQLVSGVLEVELGEGGRATQRVKVMKPDGGSFSDGKTHSVIVSIYKKS
LSIQVDDDHLKSVPLLSFGFAHSSPTSFFIGGLPLGVESHLPIRLHDLSRLFRGCIHHLV
LAGVLVDLSEAIRYEGAEFDSCLLEEKVGEVFSDEDDVEPTPDPTHQSVAPPTHLSALTP
GALTCVSEAEPHFLSAAAQFGLSKHSHMTFIINPNTVRRSLSVRLSIRTRASDGSILILT
DSKHMDFIILRLTGGRLMMSADLGKGPASITSSVVVNDGHWHDVSAEVSRRSASVSVDDS
SPKSVTVKGNQLDVDERLYLGSFPHTHSHTSSRRLNNLSSSLPGCLRSVSLNGAMLDLTK
PTSQHDVTSCFSTDQTGSYFNGSGYAVFMHDGYKVGSDLSVKLEFRTSQSDGVFVGVSSA
KVDAIGLEMVNGQVVFNVNNGAGRVSVRSLAQVLCDGQWHHLLATKNKHTLSLTIDGRSY
TTINPYPQSTSAETNNPVYLGGYPVGVRQNCLSISSRFRGCLRNLQLIKSHLSDTLKPSS
AHFLLGVTPFSCPV
NT seq
9225 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgctgcttttgttgtttctcttggagcaaacatcagctcaacagagaggtttg
tttccggccatcttgaatctggcgagtaacgccatcatcagcagcaatgccacgtgtgga
gatccagatcctgaggtttactgtaaactggtcgatcatgttccaggacgaaagatcagg
aactcacactgtcctaaatgtgacgccaactctgtcctgtccaaagaacgtcatccaatc
acaaacgccatcgacggaacaaaccaatggttccagagtccgagcatcaagaatggacga
cagtttcactggatcaccatttcactggatctcaaacagatttttcaggtcgcttacatc
atcatcaaagcagctaactctcctcgacctggtaactggatcctggagcgctctctggat
ggtgtgacctttgaaccgtggcagttttacgccatcagtgacactgagtgtttgactcat
tacaatgtgactccaagactcggtccaccgacgtacaagagggacacggaagtcatctgc
acgtcctactactccagactcaaccctctggaacatggagagatccacacctctctcatt
aatgggcgacctggtgcagacgatttgacctctgacctcctgaacttcacgtcagctcgt
tacatcagactgagacttcagcgaatcagaacgctgaatgcagacctgatgacgctgagc
acccacgacccccaagacatcgaccccatcgtgacccggaggtattattactccatcaaa
gacatttctgtgggtgggatgtgcatctgttatggacacgcaaagagctgcccattggac
cccgttaccaagaagctgcattgtgtgtgtgaacacaacacctgtggagagaactgtaat
gaatgttgccctggttaccaccagcagccatggcaaccaggaaccatctctgacggaaac
acatgcgagaagtgtaactgtcacaacaaaacctttgagtgtttcttcaatcaaacggtc
gccaaactctcgctgagtctcgactctgctggagttcgccgtggaggcggagtttgtgtc
gactgtcaacaaaacacagacggagtcaactgtgagacgtgtcgagacggatactacaga
cctgagggggtttctccatactcagagtctccgtgtgtaaagtgtaactgtgacgtcaga
ggatcttcatcatcagtttgtgtcaaagacgacaaaaaacaatccggtcagtgtgtgtgt
ctgcagggtttcacaggccgacagtgcgaccgttgtgcgtttggttacagagattttccg
cggtgcgttcgctgtgagtgtaacctgtcaggcagcaccaacagtgacccctgcaggcgg
tgcagctgcaagctaaacgtgatgggcgctcactgtgatctctgtaaaccaggtttcttt
aaccttcacaagaacaatcctctgggctgcagcgactgtttctgtttcggcgtctctgac
gtctgtgagagctccacctggtccacggctcaggtgtatcataaagatgcttggctccgc
cccgctgagtcactcctcagcccagctgctattcatgataatgacctcatacccagcaat
gcatcctcaggccacacccaccaactgctgtcatggacagcacccaccaattttcttagc
aacaagctggtgtcttatgggggttacctaaagtactcggtgatttatgacatcccattt
gacaatgaagaccgctctcttcccgcctactctgacgtcatcattgagggaaatggtgaa
ggtgtccgtctgtctcctcgtgtcccggttcttctgtctccgctggctgagcactctgtt
gctgtggcaatcgtcccacaacattttgttcacgaccaaacaggagtggacgtaactcgt
gacgtcctgttgtctgtcctcactaatgtgacgtcactgagggtcagagttcacctggac
gtccctgcagacaaactcatacgtctcaggtctgtatctctggatgttgctgactcagga
tcagactctgggattcaggcggttgccgtggagacatgtgaatgtccatggggttacagt
ggcacttcctgtgagtcatgtctcccagggttttacagagtgggcggagtcatgtttgga
ggaaactgtatgcagtgtgagtgtaacgatcacgccgtcgagtgcgacatggacggagtt
tgtttggaatgtgagcacaacaccacaggtcctcactgtgatcactgtctccctggtttc
tatggcgacgccacagaggggacgacacatgactgtcagccttgtccgtgtcctctgaca
gagccgtccaacagcttcagtcccacctgtgtgttggcgacgtcaggtcaggtgtcatgt
gaccagtgtcaggtgggatacacaggagtgaactgtgagaggtgtgccactggttactat
ggtaacccacaggtggtgggcgggacctgtgttcgttgtgagtgtaacggtaatgtggac
gtaaccaaagctggacactgtgacactgtcactggagagtgtcttcattgccttggcaac
acaactgggagacactgtgaagtctgtcagcctggttactatggagacgccgtacaggca
aaggactgtcaggagtgtgggtgtgatgtcagtggtgccatctccagtgtttgcaatgtc
acaacaggtcattgctcatgtcaagaaaatgtgacaggacgcacctgtgacatgtgccag
atggggttctttggcctgagaagtgggcggggttgctcagcctgtaattgcagccaatca
ggatccgtgtctgtgacatgtgatgaggatggtcagtgtcagtgtgtgagcggtgtgggc
ggagacaagtgtgagcgctgtagtagaggttactatggttaccgtcagagtggctgcaca
gcatgcacctgtgatcacactggtgggaactgtgacccagagagtggagagtgtgtatgc
cccgcccacacagagggagacacctgcgataggtgtgagatagggtactggggtcatgac
ctcaacactggctgtaagccatgcagctgcagcacagcaggaagctcctcccctcagtgt
gacatcacaaatgggcagtgtcagtgcaaagagggcttctctgccaggtcatgtgaccag
tgtgtacctggttaccatggttacccagcatgctctgtgtgtggctgcgactcagcggga
acagacgagcgcttctgcaactcgactctgggagtgtgtgactgtgagcacggaggagtg
tgtgtgtgtaaggtgggtgtggccgggcgtcactgtgaggagtgtgtctctggttggttt
ggtctgtcatcgatgaatccacacggctgctctcagtgtttctgttcaggactgagccga
gactgtgaagagaggggaggagtctacagaagacaggtcaccctggctcgctctccgtct
ctcctgactgtggtcagtcagtataacctgcagggtttagtgtctggagtttaccaacag
ggcggcgacatgttacttgacactcgtcaggtggacttaagcagactcaccggccccctc
tactggagactgcccccccagtttgaaggtgaccagctgatgtcctacagtggcctcctg
tcttactccgtcacgttctttgctgaagacggttcaggactgtccaatcaggagccccag
gtgatgatgaggggcggtactctgaagaagcatgtgatatacactgacatggttgccccg
agcaacggcatcaagacccagcacaacatcaggatgacagagtacaaatggaagtatttt
aactctgtgtgggaggagtcagtgagtcatgaagacttcatgtccgtcctcagtaatgtc
cagtacgtgatcatcaaagcatcgtatggaaccagacttcagcagagcaggatttccaac
atcaccatggacacagcagtggaggaggagtcagaggaagagtctgatgtcataggggcc
gtggccagatttatcgagtcctgcatttgtccacttggatacaaaggactgtcgtgtcag
gagtgtgcgttgggttatttccgtcagccttggtctgagttgtcctctcagagacagacg
tccatggttgtccgtccatgtgtccagtgccgctgcaacaatcacagtgagacctgtgac
agtgagacaggagagtgtcaggactgtcagcatcacaccagtgggcagcgctgtgagctc
tgtgccccagggtatcatgggaaagtcagtggctccatcagtgactgttctctgtgcgcc
tgtccactcagagacaacagtttcagttccacgtgtgtgtcagagggagcgtttggtgat
tttcgctgcacttcctgtcaaacaggatatgagggaagatattgtgagaggtgttctgtt
ggttactatggtaacccctcagtgcatggtgggaggtgtttttcatgtacctgcagtggg
tggggctcgctccacccactgtgtgacacagtcactggacaatgtgagtgtaaggctggg
gtcaaaggtcagtcctgtgaaaggtgtgacgagagatatatcctggatggaggagagtgt
gtattgtgtgaggacggttgcgtggacgttcttctcgacgatcttgacaaactacacaac
gtctttgtctctgctaatgtcagcgggatttccatggcaccgtacggccagctggtggca
ctagagaaccagaccagaggctcctcccagttcatgttttcacagaacaactctgtcatg
ttccgtctgtcccgagtggacgacgacttggatcatgtgacctctgaactcagcacgtta
ctgcgacaggtcacacatctgtccgaccacatggaggaagtggacgtgtcgaccaacacc
agcctctcccagggtgcactgctgctgaggaacatcggcagacttcaggagaggattctg
gtcctgcagagtcaggcataccatgtgacccagaccgcaggggaggagtttgactcggcc
aatcagacacatttactcgatgagttacaggtgatgttggaaaccatgagaggcatcaat
gtagcagctgccagtgcaacagcagatcaggagctcagcctgtcacagtctctgtggaac
tcactgcatgtggactttatgtccagcagggctgcgcgcaacatcaggctccacggcctc
gctgcctcactgaccgtccacatggaggcgctgcaacacatcagcgcacatctggaccat
gctgaagacaaaaacacgcacacacacacactgctgcaatctacacacacactgctgcag
cagcacaaggctgtctgtcagagcctgagtgtggcgtacgtgtctgtggatgctgtgatg
gaggacgctcagctgttgttggacgatgtcttcagtcttgtggatgagttgacaaacacc
agtgcacaggtggagctgatgggtgggcagttggaccagtggcaccccctgctgaggaag
caggtggacaatttggttgtgggactgaagaggacggatgccctggaaaatgtctataaa
gcagagagccacgccaacctgctgcagaactacgctctctctgtgcacagttctctctct
tctgtgtgtaatggatctcaaaatggccgtcaactatttcagctcgacggtgacatcaca
cagcaggttgactttgcccagcaactggcgtcgttagcccaggtctcctcctcctgtgct
ctcaacatgagcgtccaatcagagcagcttctgtcagaggagacgagagacaaactcaac
gtcagcaacactgttttacaccaaagtcaacaacttcatcaaactgttgaagatttgcag
ctgaacatctccatggtaaccagcagtctgcgactggtcagagagagtgtccaaaactca
agtcttctcctccatcagccaatcagagagctgcagagtctccacggttcctcaaaatca
ttacgtctggctcagctacagactacagctgcacactctggcctgcagatggtgctgcaa
cagatgcagagactcagtgatcagctgcaagattcttcttctgtggtggaaaataccatc
gacacagtgagagacacaaatgagctggtgatgcagacacgcgctgcagccaatgaggca
cagagtaaactggaggaggcagagcagcgcacagagcatctgatagagcgaatcaagccg
ctgagcattctgggagaaaaactgggacgtaacctgtcagacattagagagctgatcgat
caggccagaagacaggcagcatcgattaaagtggccgtgcaggtggacagagacggagac
tgtgtgcgttcatacagaccagagatccagtcgagtcatttcaacagtctgagtctcgtc
ctgaagacgacgactcgacaaaacctgctgttctacctgagcagcaacaccacggtggac
tacctggcggcagagatgcatgatgggaaagtgtctctggtgtggaatctgggttcaggc
accagcagactggactttcctgaactcgacatcgccaacaacaaatggaccagaatcaat
gctacacggtttggcacccacgtgtctctgtcagtccatcggctggaatcagagacacac
ccactgcccgcggtaacaagctcatcaccaggttcttctcgagttttagacattgacaga
aactctgtgatccacattggaggactgggagctcacactcagagcaccgcagctctgagg
tcgacaacttttcagggttgtctgagtgaagcttcactcaacgagaggaacatcggactg
tggaactacgacagcagagaaggacagtgtggaggctgcttcagcagtccacagactgag
gagacgtccttccactttgatggttctggattctcagtggtccagaagtctctgcgtgca
acttccacctccattgttctgctgtttaaaactctgtcacctggtggattagtgctgtac
ctggcctccaacaacactagagacttcctgtccatagaactggtggaagggcgtgtacgt
ctgacctttgaccttggctcaggtgctctaaccctgacctccaacaggaagtataacagc
ggtgtgtggtacaagatcacgctgcagaggaacaaacgcaaagtttacctgtccatcatg
gctgctgaccaatcatcggagaaggaagtgttggaaggggagtctcctggaacggcctct
gacctgaaccgctccgacctggaccccatctacatcggaggacttcctgtgtccagacca
atcaggcgacaggttgtgtccaggtcctatgtcggctgcataaagaacgtggaaatagca
cgttccaactttgacctgctgcgagacgcattcggtgtcaggaagggctgcgtcgttaag
gctgttcgcagtgtgtcgctgctgaacacaggctttgttcagatccctcccacatcacta
ggtcgggaggcggagcttctcttctccttctcctccaacaaccagtcaggaatcttgctg
gctggcttcagctcagacaaacagcacttcttgtctgttcaactggtctcaggtgtatta
gaggtggagcttggtgaaggaggcagagccactcagagggtgaaggtgatgaaacctgat
ggaggatcgttcagcgatggaaagacacattctgtgattgtctccatctacaagaagtct
ctgtccatacaggtggacgatgatcatctgaagtccgtccctcttttgtcatttggattc
gctcattcgtctccaacctccttcttcattggtgggctgcctttaggggtggagtcacat
ctaccaatcagattacatgatttatccagactgttcagaggctgcattcatcacctggta
ttagctggagtacttgttgacctatcagaagcgatcaggtatgagggggcggagtttgac
agctgcctgttggaggagaaagttggtgaagttttttctgacgaagatgatgtggaacca
accccagaccccacccaccaatctgttgccccgcccacccaccttagcgcactgacacct
ggagcactcacgtgtgtttcagaggcggagccacatttcctgtcggcagcagctcagttt
ggtttgtccaaacatagtcacatgactttcatcattaaccccaacactgtcaggaggagt
ctctctgttcggttgtcgattcgaacccgagcttcagacggttccatcctcatcctcact
gactccaaacatatggacttcatcatcctcagactgacaggaggaagactgatgatgtca
gctgacctggggaaaggccccgcctccatcacctcatctgttgttgttaatgatggacac
tggcatgacgtgagtgctgaggttagtcggcggtcggcttctgtgtctgtcgacgattca
agtcccaaatcagtgactgtgaaaggaaatcagctggatgtggatgagcgtctttacctg
ggctcgttcccacacacacactcacacacgagcagcaggagactcaacaacctgagcagc
agtctaccaggttgtcttcgctctgtcagtctgaacggagcaatgttggatctgaccaag
ccaacgtcacaacatgatgtcacttcctgtttcagcaccgaccagacaggaagttacttt
aacggcagcggctacgccgtcttcatgcatgatgggtacaaagttggatcagatttgtcc
gtgaagctggagtttagaaccagccaatcagacggagtgtttgtgggcgtcagcagtgca
aaggtcgatgccattggcctggagatggttaatggacaggtggtgtttaacgtcaacaat
ggtgcaggacgagtgtctgtacgttcactcgctcaggtgttgtgtgacggacagtggcac
cacctgctggccacaaaaaacaaacacaccctgagtctgaccatagatgggcggagttac
accaccatcaacccttacccgcaatccacatctgctgagaccaacaaccctgtttacctg
ggtggttatccagtgggggtgagacagaactgtctttccatcagctccaggttcagaggt
tgtctgcggaaccttcagctcatcaagtctcacctgagtgacactctcaaaccaagctcc
gcccacttcttgttgggtgttacacccttttcatgtcctgtctag
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