Solea senegalensis (Senegalese sole): 122779601
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Entry
122779601 CDS
T07721
Name
(RefSeq) Down syndrome cell adhesion molecule-like protein 1 homolog isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122779601
Cell adhesion molecules [BR:
ssen04515
]
Immunoglobulin superfamily
DSCAM family
122779601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C2-set_3
Pur_ac_phosph_N
Ig_5
Ig_6
Sp38
Interfer-bind
Receptor_2B4
ChitinaseA_N
DUF1461
DUF6034
Motif
Other DBs
NCBI-GeneID:
122779601
NCBI-ProteinID:
XP_043898036
LinkDB
All DBs
Position
LG13:1132769..1183095
Genome browser
AA seq
2131 aa
AA seq
DB search
MGGAEAPLIPPPCLAGQQGWRDLRGAQSPVQHGDSPGQKTAPHICQDCQIFLKNIPAIYG
MWLVLLLLLYSLQEVHSEDVGSTRLYFVNASLQRVTYSSSVGVSLPCPAGGTPSAILRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAYNSYIHDNDYFCTAENQAGKIRSPNIRIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPAAVQEYVSVVSWERDTVSIVQGNRFSLTSFG
ALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVMDPNESSPTILDSFQAGEVYAG
QSIELPCTAGGYPSPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDSGSYACEVTNSF
GSKEVSGQLHVIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYTISWYRNTEPIVPDQH
ISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTAQDFSIILLEDGTPRIVASFSERVVN
PGEPFSLKCSAKGAPPPSITWTLDDEPVVRDSTYKTSQYTLSDGLTVSHVNVSSPLIRDG
GVYRCVARNSAGSAEYQARINVRGPPRIRPMRDITAVAGRNTYITCRVIGYPYYSIKWLK
DGMQLPDNHRQVLFENGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVTVKVPPLIQ
PFDIPSTSVGKLMYIACVVSSGDMPIRITWHKDGQLIVPGSASGVAIETKEFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLIVTVPPRFVVQPNNQDCIYGKAGVLNCSVEGYPP
PKVMWKHAKGKIIHTVSTTQDDAARGLICAFALCRAAAGVGNPQQYHPVPLTGRIQIMSN
GSLLIRHVLEDDRGYYLCQASNGVGSDISKSMILTVKIPAMITSHPNTTMARKGQTKELN
CTARGEQPIIIRWERGDTVIDAERNPRYSITINKKGDEVISTLKLNPAERGDSVFFSCHA
INSYGEGRGLIQLTVQEPPDPPELEVREVKDRSMNLRWIQRFDGNSIITSYDIEYKNKSD
SWDHMYTTRNISPTNNQANIVELHPACVYSIRMYSYNKIGRSLPSKELTISTEEAPPDGP
PMEVILQPMTSQSIRVTWRAPKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSE
VYTLDNLKKFAQYGVVVQAFNRAGTGPSSTEINATTLEDVPSEPPQNVRAISVTSDEAVI
TWAEPPRLTLHGVLKGYRVVFWSLFPDGEWGEMQNITTTREQVELRGLEKFTNYSVQVLA
YTQAGDGVRSNVLYIQTREDLPGPPAGIKAVPSSPNSVVVSWLPPHKPNGVIRKYTIYCS
SPNSGQPAPSEYEANPEMLFYRITHLTRGKQYHIWAAAVTTAGRGNISSKVTVEPAGKVP
AKILSFSGTVTTPWMKEVRLPCSSVGEPAPTIKWTKDSEDSAIPVTADNQRQILSNGTLV
LRSVKAEDSGYYTCTATNTLGFDTIIVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNG
GSSIRGFVLQYSVDNTEEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEI
IEAKTHGREPVFNKDQPLLTHINSTHAGLNLQGWTSGGCPITDLMLDFRPKGTWAWQTLK
ANTTTQLFLSELREATWYELKMKACNSAGCGNQTSQFATTDYDGSTIPPIKSARGEGDDV
KKLFSIGSPVILVTLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGP
PQGPRLHIDIPRVQLLIEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQAL
IQNSGPLIDMSDIRPGTNPVSRKSIKSAHSSRNRYSSQWTLSRPSVSQSTASARTLTSDW
RTMGSHGITATESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHA
KFTITECFISDSSSDQMTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAV
PIPHRANKSEFCNLPLYMKTDPFFRKQGELHDPCPAVPPREASIRSLTQRAYHTQGRHKT
LDPTKQQALTLGHSGPSSLGSSLGTATLPQRTLTMPSSNAAATASTSSTGSNPTNINKGG
SRDSLLESSSSALGRLQKQSVGAYSKSYTLV
NT seq
6396 nt
NT seq
+upstream
nt +downstream
nt
atgggcggggcggaggcgcctctcattccccctccatgcttagcggggcagcagggctgg
agagacctccggggagcacagtcgccagtccagcacggagactcgcctggccaaaaaacc
gcgccgcacatttgccaggattgccaaatattcctgaaaaatatacctgctatttatggc
atgtggcttgtacttttactcctgctgtactctctccaagaagtacacagtgaggatgtg
ggctctaccaggctgtactttgtgaatgcctccctgcagagggtaacctactccagctcg
gtgggggtgtccctgccctgtccagcagggggcacccccagtgccattctccgctggtac
ctggccaccggcgacgacatctacgatgtgccccacatccgccacgtccacgccaatggc
actctgcagctctaccccttctcgccctccgcctacaacagctacatccacgacaacgac
tacttctgcactgccgaaaaccaggccggcaaaatccgcagccccaacatccgcatcaaa
gctgttttcagggagccgtacaccgtgcgagtggcagaccagcgctcgatgcggggcaac
gtagctgtgttcaagtgcctcatccccgccgctgtgcaggagtatgtcagtgtcgtgtcc
tgggagagagacactgtttccatcgtccaaggtaacaggttctcgctcacgtccttcgga
gcgctttacatctctgacgttcagaaggaggacgccctctcgacgtaccgttgcatcacc
aaacacaagtacagcggcgagacgcggcaaagcaacggcgcccggctctccgtgatggac
cccaacgagtcctcgcccaccatcctggacagtttccaagcaggggaggtgtacgcgggc
cagagcattgagcttccctgcacagcaggaggttacccaagccctactgtgcgctggctg
aaagatggccgcccgctgccctcagatgcccgctggacacggcgtctgacagggttgacc
atcagcgacctgaggcaagaggacagcggcagctacgcctgcgaggtcacaaacagcttt
ggctcaaaggaggtgtctggacagcttcacgttatagatcctctgcgagtgaccttgtcc
cctaagaatctgaaaacgggcatcagcagcacactcttcttcacctgcactgtggagggc
tctccggaatacaccatctcctggtacagaaacaccgagcccatcgtccccgaccagcac
atctccatccaggggcaacacaacgacacgctgcagatcactgcggcgcagaagttccac
tccggggcctaccagtgcttcgcctcccgaaagggtcacaccgctcaggacttttccatt
attctgctcgaggatggtactcctcgtattgtggcttccttcagcgagcgggtggtgaac
cccggcgagcccttctccctcaaatgttcggccaaaggagccccgcctccctccatcacc
tggacgctggacgacgagcccgtggtgcgagactccacctacaagaccagccagtacacg
ctgtcggacgggctgacggtgtcgcacgtcaacgtcagcagcccgctcatacgagatgga
ggagtgtatcgctgcgttgcacgcaactcggccggtagcgcagagtaccaagcgcgcata
aacgtaagaggtccacctcgaattagacccatgcgcgacatcaccgcagtggcaggcagg
aacacctacataacgtgccgcgtgattggttacccgtattactccatcaagtggctaaag
gacggcatgcagctgccagataatcaccgtcaagtgttgtttgagaatggtacgctgcgg
ctgacggacgtgcagaagggcgcagatgagggcacctacttatgtagcgtcctgatccag
ccccaggtgtcaatcaaccagaccgtccacgtaactgtcaaagttccgccgctcatccag
cccttcgatatcccctctacctcagtggggaagctcatgtacattgcctgtgtggtgtca
tctggggacatgcccatacgcatcacctggcacaaagatggccagctcatcgtgccaggc
tccgcctctggcgttgcaatcgagaccaaagagttcatgagctccctgcaaatatccaag
gtgacactgaagcacaatggaaattacacctgcatcgccagcaacgccgctgccaccgtc
agctgggaaagacagttgattgttactgtaccgccacgttttgtggtgcagcccaacaac
caggactgcatctacgggaaagcaggcgttctcaactgctctgtggagggttacccgcct
ccgaaagtcatgtggaaacatgccaaaggtaaaatcattcacacagtgtcaacaacgcag
gacgacgcggcccgaggactcatctgtgcgtttgctttgtgtcgtgccgctgcaggtgta
ggaaaccctcagcagtaccacccagtccctctaaccggccggatccagatcatgtcaaac
ggctctctgctcatccgacatgttctcgaggatgaccgggggtactacctgtgtcaggca
tccaacggagtgggctcagacatcagtaaaagcatgatcctcactgtcaagatccctgcg
atgatcaccagccaccccaacaccaccatggcgagaaagggccagaccaaggagctgaac
tgcaccgcgcgcggcgagcagcccatcatcattcgctgggagagaggggacaccgtcatc
gacgcggagaggaacccgcgttactccatcaccatcaacaagaagggggacgaagtcatt
tcaaccctaaagttgaatccagccgagcgaggagattcggtcttcttctcctgccacgcc
atcaactcctatggagagggtcgaggcctcatccaactcactgtgcaagagccaccagat
cctccagagctggaagtgagggaggtgaaagacaggagcatgaacctgcgctggatccaa
aggtttgatgggaacagcatcatcaccagttatgacatcgagtacaagaacaagtcagac
tcctgggatcacatgtacacgaccaggaacatctcccccactaacaaccaggccaacatc
gtggagctgcacccggcctgcgtttacagcatacgcatgtacagctacaacaagattggc
cgcagcctccccagcaaagagctcacgatcagtactgaagaagcgccacctgacgggccg
ccaatggaggtcatcctccagccgatgacgtcccagagcatacgggttacatggagggcc
cccaagaaggagctgcagaacggcgtgatccgaggctaccagatcggctaccgagagaac
ggcccgggcagcaacggacagtacagcatagtggagatgaaagcgacaggggacagtgaa
gtgtacaccttggataacttgaagaagtttgcccagtacggggtagtggtccaggccttc
aacagagcagggactggaccctccagtactgagatcaatgctacaacactggaggatgtg
ccgagcgagcctccgcagaacgtgcgagccatctcggtgacgtcggacgaggcggtgatc
acgtgggcggagcctccgcggctgacgctgcacggcgtgctgaaaggctaccgggtcgtg
ttttggtccctcttccctgacggagaatggggagagatgcagaatatcaccacgacacga
gagcaggtggagctgcgagggctggagaagttcaccaactacagcgtgcaggtgctggcc
tacacgcaagctggagacggggtccgcagcaatgtcctgtatatccaaacccgcgaggac
cttcctggtccaccagccggcatcaaggcagttccctcatccccaaatagtgtagttgtg
tcctggttacctcctcacaaaccaaatggtgtcatccgcaagtacaccatctactgctcc
agtccaaactctggacaaccagcgccaagtgagtacgaggccaaccccgagatgctcttc
taccgcattacacacctcacgcgtggtaaacaataccacatctgggctgcagccgtaaca
actgctggccgtgggaacatcagctcaaaggtcacagtggagcctgctgggaaagtccca
gctaagatcctgtccttcagcggcacagtcaccacaccttggatgaaagaagtgcgtctg
ccctgcagctccgtgggagagcccgcccccacaattaaatggaccaaagacagtgaggac
tctgccattccagtgacagctgacaatcagcggcagatcttgtccaatggaacgctggtg
ctgcgttcggtcaaagcagaggattctgggtattacacctgcacggccactaacacactg
ggattcgacaccatcatcgtcaacctcgtagtgcaagttcctcccgaccagcctcgcctg
accgtctccaccacctccacctcctccatcaccctggcttggattcctggggacaacgga
ggaagctccatccgaggatttgtgctgcagtattctgtggacaacacagaagagtggagg
gacgtgttcatcagctccagtgagcgctccttcagattggataatctccgctgtggaacg
tggtacaaggtcaagttggcagccaagaacagcgtgggctcgggccgcatcagtgagatc
attgaggccaaaacccatggaagggaacccgtgttcaacaaagaccagccgttgctcacc
cacatcaactccactcacgcaggactcaacctgcagggctggaccagtggcggctgcccc
attactgacctgatgctggacttcagacccaaaggaacctgggcctggcagaccctgaag
gccaacaccaccactcagctgttcctcagcgagctgcgggaggccacctggtacgagctc
aaaatgaaggcctgcaacagtgccgggtgtggaaaccagacctcccagtttgccactaca
gactatgacggcagcacaataccacccatcaaatcggcccgcggcgaaggcgacgatgta
aagaagctgttctccatcggctctcccgtcatcctggtcactctgggcgttgccttgctc
ttcatcatccgcaagaaacgcaaggagaagaggctcaagcgtctaagggatgccaagagc
cttgctgagatgcttatcagcaaaaacaaccgcagtatagacacacctgtgaagggccct
cctcaagggccgaggctccacatcgacatcccgcgcgtccagctgctcattgaggacaag
gaaggcatcaagcagataggggaggacaaggcagcggtcccagtgacggacactgagttt
agccagtcagtcaatccacagaacttctgcacaggcgtctctctgcatcaccaagccctc
atccagaattcagggcctttgattgacatgtctgacatccgcccaggcacaaaccctgtg
tccaggaagagtataaaatcagctcacagctccaggaacagatactccagtcagtggaca
ctgagccgaccgagtgtgagccagtcgacagcctcggcgcgaactctgacctcagactgg
cggacgatgggctctcacggcatcactgccactgagagcgacagctacagtgccagcctc
tcccaagacacagataagggtcgcaacagcatggtgtcgacggagagcgcctcctccacc
tatgaggagctggcgagggcctacgaacacgccaaactggaggagcacctgcagcacgcc
aagttcaccatcacagagtgtttcatctctgacagctcgtctgaccagatgaccacaggt
accaatgacccagcagacagcatgacctccctcagcacgccgtctgaaccgggcatctgc
cgcttcacagcctcaccgcccaagccgcaggactatgaccgcggtaaaaacgtggctgtg
cccattccccaccgcgccaacaaaagtgaattctgcaacctgcccctctacatgaagaca
gacccattcttccgcaagcagggggagctgcatgacccatgcccggctgtgccaccacgg
gaagcctcaatccgcagccttacgcagcgagcgtatcacacccagggccgtcacaaaact
ctagaccctaccaagcagcaggctcttacgctgggccactctgggccaagtagcctgggc
tcaagcttgggcaccgccaccttgcctcaaagaactctcaccatgcccagctccaacgct
gcagcaacagcttccacgtccagcacgggcagcaaccccaccaacattaacaaggggggc
tccagagactcgctgctcgagagcagctcctctgcactggggaggctgcagaaacagagt
gtgggggcctactctaagtcgtacacactggtgtag
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