Solea senegalensis (Senegalese sole): 122779631
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Entry
122779631 CDS
T07721
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122779631 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ssen01009
]
122779631 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122779631 (ncor1)
Protein phosphatases and associated proteins [BR:
ssen01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122779631 (ncor1)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
122779631 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
LOB
Motif
Other DBs
NCBI-GeneID:
122779631
NCBI-ProteinID:
XP_043898092
LinkDB
All DBs
Position
LG13:13908723..13963267
Genome browser
AA seq
2398 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPSHSVQYTFSGTRHQQDFAMPDYRTHMQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQYHSISGQPEHEVLEAKRPRMETIAEGHITRTPSSAGGIIL
PMSHTVQDSLRATVEVKKESQFGVKMESQSSGGPTLHMGEDQDTSPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPMEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKILEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFHRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDTEQRRVKFINMNGLMDDP
MKVYKARQFMNVWTEHEKEIFKDKYFQHPKNFGLIASYLERKCVEDCVLYYYLTKKNHNY
KTLVRRNYGRRRGRNQHITRPSQEEKSDDKNEEDKSEKAEKKEDEEKKDEEEKDEKEDSR
EIGKDKEKCDGGEDEDGKQQNTPRRKTANSQGRRKGRITTRSMANEAATVAAEETPPPAP
ESTLPDPTHLPKADPAQKAMKDPSKTPLSAMDANKASAGETGETSRWTEEEMEVAKKGLV
EHGRNWTAIAEMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRTRADRSQGEGLAT
ASPDDDEDNADDSEGGDNSSDTESAPSPSQADSSKTADSKRADSAAGEGHCSDQDKAQAS
NGKAPEHSFGELCVKEEKSPESETGSHEEKAKMAPYAASVHPKTEPQDVDMKTGEVQVKV
EPEMKEKGEKGDHGEMQRDLHSDNDSSATCSADEDVDAEPERQRIFSMEKSSMIGPAGTV
LVSPPKPAHQLTIQQLQQRAAAIPPMLPGHFSPGGIPISGLAMFQHQIKAVHESAHQEEK
QRQDQGDLERRPAFNTRSPTVIDRDGKLLSYMPYDMKLALDQEALSGRPGSPYRLSPREL
SKASLQTDPNAPNASRYSVPPVLHPSPNQLVQTLPDGGRVTFSRPSRPPNIPSPPPLIPT
TKPTDKPSFIHGGSILQGTPGTYLPPHTVYGPEGTKSTVGSISLGLPRQQDPSKSGAAIP
SIHDGRGNPTKASEGLAFRGSNTHSTPALPQSSIAADLLKSTITKLATEDMNIPDKARGE
QLAKGHVIYEGKSGHILSFDAIKNPRENTRSPRTGHEMKRTYDMMEGPMSRAHTGREGAA
FEGLFSRALPRDGIHGDPKERPLITGSIIHGTPRTAAETYEDAMKYGKQIKQESPPIRSF
EGGISKGKPYEGVNTIKEMGRSIHEIPRQDQSGQDICKTPDMSDRRVLDGAMSQIHPLNQ
STIKHNVKSLITSPSKLPHNMPQLEAMERAKYEDSKPVRHSVVNSTSVLRSTHQEASKSQ
LSPGMYEDANARRTPVNYSTNPASRGSPMLGRASEGGMSSAKSAAHERKTNMTPTQRESV
PAKSPVSSGDPVPSHSPFDPHHRPVVPGEVYRAHLPPHLDPTLAFHRVLDPAFMFSRQPS
PSNYHNTYQLYTMENTRQTILNDYITSQQMQVIPRPDMTRGLSPREQTVAMPYAAGGRGI
IDLAQMPPTILLPHPGGTGTPTLEHIAYLPGAQSPFPPRAFNPTSISPGHPVHIAAAASA
ERERERDRERDRERDREQQEKEREKEQREREREMRERERERDRERSNEYIRAGVVEQPGR
PGSQGYLHSTSPSLRTQDVVVQQRPSIFQGKSVITSLMPHSAAATSTAQSSSRYSTAADA
LAALVDAAASAPQMDVSKVKENKHERDDDMHSAAAMRRGSSIPEQQQQEAERRSVQSPYG
AMSLPGGKPHSAYSEGPGAGTKDKGPQTSKSRIEEELRTRGKTTITAASFIDVIITRQIA
SDKDSRERGSQSSDSSSSLSSSRYDNTAGGAIEVISPATSPVQLQQDKPEDGQQQAAAAG
MRAYDMSRYRPSAEPQTSSQQPPPSQAESYSQMSKTHHKTMTLADHISHIITQDFARNQD
PVPVSSSSATFQSIVPPVSSSGRAKVPSRYSPENQVQALHHQRPSSRVSPENASDKPRAR
PGKSPERGGRPMENYEPISPPQSYQGMDKQEPVGPPPQRREAESEIRNDSRSPGSVGYLP
SFFTKLENTSPMVKSKKQEIFRKLNSTSGVGDSDVGNAQPGTEIFNLPAVTSSSSINHRN
PSFSDPASNLGLEDIIRKALMGNLEERPEEHQGGVGDGRQEANPSPSMGKQKQGKANSRK
SKSPNPGQAYAGGERPSSVSSVHSEGDYHRQAQAQPQWSWDDRPSSTGSMQFPYNPLTMR
ILSSTPPTSIASPSIQSQQLQQQQQQQQQPAAGAPVAQQRVWQSLLSEQYETLSDSDD
NT seq
7197 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtagctcgggctacccccccagccaggggagcttcagcagcgagcagagcaga
tatccatcgcattctgtccagtacacattttctggcacacggcaccaacaggatttcgcc
atgccagactatcggactcatatgcaggatccacagggtcggagaagaccctcgttattg
tctgaattccaccctggaactgaaaggcctccagagaggcgccatggttacgaacagcag
tatcactccatctcaggccagcctgagcatgaggtgctggaggccaagcgacctcgcatg
gagactattgctgagggccacatcacccgcaccccttcctctgctgggggtattattttg
cccatgtcccatacagtacaggacagcctaagggccactgtggaggtaaaaaaggagtct
cagttcggtgtcaaaatggagtcacagtcctcaggaggacccacactccacatgggggaa
gatcaggacacgtctccttccaaactttccaaagaggagctgatccagagtatggaccgt
gtggacagagagattgctaaagtggagcagcagatattcaagctgaagaaaaaacagcaa
caactggaggaggaagcagcaaagccgatggagccagaaaagcctgtgacccctccacca
gtggagcacaagcaccgcagcatagtccagatcatctacgatgagaacaggaaaaaagca
gaagaggcccataaaatactggaaggtcttggtcccaaagttgagctgcctctgtacaat
cagccatcagacacaaaggtgtaccatgacaacatcaaaaccaaccaagtcatgaggaag
aagctgattttgttttttaagaggaggaatcatgctcgtaaacaaagggaacaaaagatc
tgccagcgttacgaccagctgatggaagcttgggagaagaaggtagaacgaatggagaac
aatcccagacgcaaagccaaggagagccggacacgggagtactatgaaagacaattccct
gagatccgcaagcagagagagcagcaggagcgcttccacagggttggacagcgtggaaca
ggcctttctgcaacaatcgcaagaagcgagcatgaaatttctgaaatcattgatggcctt
tctgagcaggagaacaatgagaaacaaatgagacagctctcagtcatccctcctatgatg
tatgacacggagcagaggcgagtcaagtttatcaacatgaacggcctgatggacgaccca
atgaaagtgtacaaagcccggcagttcatgaatgtctggaccgaacatgaaaaggaaata
ttcaaggacaagtatttccaacaccccaagaactttggcctgattgcctcctacctagag
agaaagtgtgttgaggactgcgtcttatactactatttaaccaagaagaaccacaactat
aagacactggtgaggcggaattatggaagacggagaggaaggaaccagcacattacacgt
ccctcacaagaagagaagtcagacgacaaaaacgaggaagacaaatctgagaaggctgag
aaaaaagaggacgaggaaaagaaggacgaggaagagaaagatgaaaaggaggattctagg
gaaattggcaaggacaaagaaaagtgtgacggtggggaggacgaggacggaaagcagcaa
aacacaccacgcaggaaaactgccaacagccagggccgccgcaagggaaggatcaccaca
cgctctatggccaatgaggctgcaactgtggcagctgaggaaacacctccccctgcccct
gagtctaccttgccagatccaacgcatctccctaaagctgatccagcacagaaggccatg
aaggacccttcaaaaaccccactgtctgccatggatgccaacaaagctagtgctggtgaa
accggagaaacttctcgctggaccgaggaggagatggaggttgccaaaaaagggcttgtt
gagcacgggcgaaactggacggccattgccgaaatggtgggcacaaaaagtgaggcacag
tgcaagaacttctattttaattacaagagacgtcacaacctggacaacctgctccagcag
cataagcaggatacaaggcgaacccgggctgataggtctcaaggtgaaggtctagccaca
gcatcacccgatgatgatgaggacaacgcagatgacagtgaaggtggtgacaacagctct
gatacggagagcgccccgtccccctctcaggctgactcctcaaagactgctgactccaag
agggcagacagtgctgcaggagaaggtcattgctctgaccaggacaaagctcaagccagt
aatggcaaggccccggagcactcatttggcgaactctgtgtcaaggaagagaagagccca
gagagtgagactggatcacatgaggaaaaggccaaaatggctccctatgcagcctcggtg
catcccaaaactgaaccgcaggatgttgacatgaagactggagaagttcaggttaaggta
gagcctgagatgaaggagaaaggagaaaagggagatcatggtgagatgcagagggatctt
cattcagataatgactccagtgccacctgcagtgcagatgaggatgttgatgcagagcct
gaaagacaaagaatattctctatggaaaagtcttcaatgattggccctgcaggcacagtg
ctggtgtccccacccaaaccagcccaccagctcaccatccagcagctgcagcagagggca
gctgccatcccacccatgttgcccggtcattttagtcctggtggcatacccatcagtgga
cttgcaatgtttcagcaccagatcaaagcggtgcatgagtctgctcaccaggaagagaag
cagagacaagatcagggagatctggaacgtagacctgccttcaacacccgcagccccact
gtgatcgacagagatggtaagctcttatcctacatgccttatgacatgaagctggctctg
gaccaggaggccctctctggtcggccaggctctccctacagactctctcccagggagctg
agcaaggcctcactccagacagaccccaacgcccccaatgcctcccgctacagtgtgccg
ccagtcctccacccttcccccaaccagctggtccagactttgccagatggaggccgtgtg
acattcagtcgacccagccgacctcccaacattccctctcctcctccactcattccaacc
accaagcccacggacaaaccctccttcatccatggaggctccatcttgcagggaactcct
ggcacgtacctcccaccccacactgtctatgggccagaggggactaagagcactgtgggc
tccatctctctgggtcttcctcggcagcaggatcccagcaaatctggagctgcaattcca
tctatacacgatggtagaggcaacccaacaaaagcgagcgagggtctggcttttagagga
tcaaatactcatagcacgccagccctgcctcagtccagcattgctgctgaccttctgaag
agcacaatcacaaagctagccacagaggacatgaacataccagacaaggcaagaggtgaa
cagctggctaaaggtcatgtcatctatgaaggaaagagtggtcacatcctctcttttgac
gctatcaagaaccccagggaaaacacccgcagccccagaacaggccatgagatgaaacgc
acttacgacatgatggaaggacccatgagcagggcacacactggcagggaaggtgctgca
ttcgaagggttatttagcagagctttgcccagagacggtatccatggagatcctaaggaa
agaccgctgatcactggatccatcatacacggaacaccaagaactgctgctgagacttac
gaagatgccatgaaatatgggaagcagataaagcaagagagcccacccatccggtcgttt
gaaggtggtattagcaaaggcaagccctatgagggagtgaatactatcaaagagatggga
cgctcgattcacgaaatcccccggcaggaccagtctggccaagacatctgcaagacccca
gacatgtcagacaggagagttttggacggtgccatgtctcagatccaccctctcaaccag
tcgactatcaagcacaatgtcaagtccctcatcaccagcccatccaagcttccccacaac
atgccccagctcgaggccatggagcgggctaagtatgaggacagcaagccagtacgccac
agtgtggtcaactctacctctgtcctgcgctccacacaccaggaggctagcaaatcccag
cttagcccgggcatgtacgaggatgccaatgctcgcaggacacccgtcaactacagcaca
aatccagcatccagaggttcacccatgctgggacgtgcttcagagggtggtatgagctca
gcgaaatctgcggcacatgaaagaaagactaacatgaccccaacacagagggaaagtgtt
cctgcaaagtccccagtatcaagtggtgaccctgtcccctctcacagccccttcgacccc
caccacaggcctgttgttccaggggaagtataccgagcccacctgcctccacatcttgac
cccaccctggccttccacagagtgctggacccagcatttatgttctccaggcagccgtcc
ccatcaaactaccacaacacttaccagctgtacaccatggagaacacacggcagaccatc
ctcaacgattatatcacatcccagcagatgcaagtcattccccggcccgacatgacccgg
ggattatcaccacgggaacaaaccgtcgctatgccttacgcagctggaggacgagggatt
attgatctagcccagatgcctccaactatcctgttgcctcaccctgggggaacaggtact
cccactttggaacacatcgcctacctccctggagctcagtcccctttccctcctagggct
ttcaacccaacctccatatcgccaggccatccagtccacattgcagctgctgccagtgca
gagagggagcgggagcgtgaccgggagcgtgaccgggagcgtgaccgagagcaacaagaa
aaagagagggaaaaggagcagcgggaaagggaacgggaaatgcgagagcgagaacgagag
cgggaccgagagcgaagcaatgaatatatacgtgcaggtgtagtagagcagccagggcga
ccagggagtcaaggttatctgcactctacttctccctcgctcaggacacaggacgtggtg
gttcaacagcgaccgagtattttccagggcaagagtgtcatcacttccctaatgccccat
tctgcagcagcaacttcaacagcacagagtagctctcgctacagcactgctgcggatgct
ctggctgcgctggtggatgctgcagcctctgccccacagatggatgtgtccaaggtgaag
gagaacaaacatgaacgggatgacgacatgcattcagcggctgcaatgcggcgaggttcc
agcatccccgaacagcaacaacaggaggcagaaaggcgatccgtgcagtcaccatatggt
gccatgtctctgccaggaggtaagccccattcagcttactccgaaggccctggcgctggg
actaaagataaaggacctcaaacttcaaagtcccgcattgaagaggagcttcgaacccgt
ggaaagacaacgatcacagctgccagcttcatcgacgtcattatcacgcggcagatagcc
tctgacaaagactcacgagagcgaggctctcagagctctgactcctctagcagcttgtca
tctagtcgatatgacaatacagctggaggagccattgaggtgatcagtccggctacttcc
ccagtccaactccagcaggacaaaccggaagatgggcaacaacaggcagcagcagctggc
atgcgggcctatgatatgagtcgttatcggccatcagcagagccacagaccagttcccaa
cagcctcctccctcccaggcagaaagctactctcagatgtccaagactcatcacaaaacc
atgaccttagccgaccacatttcgcatatcataacccaagactttgcccggaatcaggac
cctgtcccagtctcttcctcatctgcaacattccagagcattgtgccacctgtgtcatct
tcaggtcgggccaaggtgcccagtcgctacagtcctgagaaccaggtccaagccctgcac
caccagagaccctccagtagagtttcgccagaaaatgcttctgacaaacccagagccagg
cctggtaagtctccagagcgaggaggcaggccgatggagaactatgaacccatttctcct
ccacaaagctaccagggcatggacaaacaggaacctgttgggcctcctcctcagaggcga
gaggctgaatctgaaatcaggaatgactcaagatccccagggagtgtcgggtatttgcca
tccttcttcaccaagctggagaacacctcaccaatggtgaaatccaagaagcaggagatc
tttcgtaagttgaactccacctctggtgttggtgattctgatgttgggaatgcccaacca
ggcacagagatatttaacttgcccgctgtgaccagctccagcagcatcaaccacaggaat
ccttcctttagtgatccagccagtaacctgggactggaggacatcatccgcaaggctttg
atgggaaacttagaggagagaccagaggaacaccagggaggtgttggggatggccgccag
gaggcaaatccatcacctagtatggggaagcaaaagcagggcaaggccaacagccgtaaa
tccaaatctcctaacccgggtcaggcctacgctggaggggaacgtccctcttcagtgtcc
tctgtccactctgagggagattatcacagacaagcccaggcccaaccccagtggagttgg
gatgaccgaccctcatctacaggatccatgcagttcccttacaacccactgaccatgcgc
attctaagcagcacgccaccaacctccatagcctcaccctccattcagagccagcagctg
cagcagcagcagcaacagcagcaacagcctgcagctggagcgccggtggcacagcagcgt
gtgtggcagtctctgctgtcagagcaatatgagaccttgtctgacagtgatgactga
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integrated database retrieval system
