Solea senegalensis (Senegalese sole): 122779636
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Entry
122779636 CDS
T07721
Name
(RefSeq) roundabout homolog 1-like isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssen04515
]
122779636
Cell adhesion molecules [BR:
ssen04515
]
Immunoglobulin superfamily
ROBO family
122779636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
fn3
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Izumo-Ig
CAC1F_C
Ig_J_second
DUF3381
Motif
Other DBs
NCBI-GeneID:
122779636
NCBI-ProteinID:
XP_043898114
LinkDB
All DBs
Position
LG13:complement(15925697..16054431)
Genome browser
AA seq
1599 aa
AA seq
DB search
MKAEHSPLMFLLISLLYVSQVQHSHTMDMSSDKQGANNELITQTPASGQDNSLGYKGSRL
RQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPAPTVEWYKDGERVETVRDNSRSHRML
LPSGSLFFLRIVHGRRSKPDDGSYVCVARNYLGQAISHNASLEVAILRDDFRQNPVDVMV
AVGEPAVLECQPPRGHPEPTISWRRDGVTLDDRDERITIRSGKLMITNTRKSDAGKYICV
GTNMVGERESEVAELTVLERPTFVKRPNSVVVLAEESVEFHCVVQGDPVPTTRWRKDDSE
LPKGRFEILEDHTLIVRQVTSSDEGSYTCVVENMVGKSEASATLTVHVNTVPPAFAIRPR
NQVATVGRTVTFRCEATGNPQPAIFWQKEGSESLLFSYQPPQPYSRLSVSQMGSLTITDV
QHSDGGMYSCQALNIAGSVITKALLEVTDSGTDHPPPVIRQGPVNQTVLVDSTIVLGCKT
AGHSSPTVHWKKNDVLLTSVDSRISTTDTGSLEIRQTKLADTGFYTCVASSPNGQASWTA
YVQVAEFGVHAVHPTDPNLVPSAPFKPEVTDISRTSVSLSWKTNPSAGAKATSYLIEAFS
YTSGSRWVTVAEHVKTETFVLQNLKPGAVYLFMVRAANAYGLSDPSPISDAVRTQDSTST
MQGVDHRHIERELGDVAIHLHTPAVVSSSAVRLQWMVEQQSPYTQGYKVLYRASAAHGQP
ESQWSVLDVRNPREDGVVIGQLKRGAIYEFKVRPFFDEFQGADSEVKVVRTLEEAPRRAP
QGVTVTKSDTNGTAILIAWKPPPDSEEAGVIQEYKIWCLGNESRYHVNQTVDGSSSSVLI
SGLAPGIRYSVEVAASNSAGPGVRSDVTFFQLDSAGQMMDISEERDTFSQISDVVRQPAF
IAGIGATCWLVLMIFSVWLYRHRKKRSGLSSTYTGIRKVPSFTFTPTVAYQRGESVCGAG
RPGLLSMGEPLNQLWLPDNWPNACANHKDCSINCCNNGNGTSDSNMTTYSRPADCIANYG
NHAENKPGGQLAPEMAIYSDVNLSNKLNEIKTFNNANMGYVSPGGDSAAMYEPIPYATTQ
LIQASIKSKASTGGALAEPLDMPCWKQPPNPPPIPKEMAAQMQYNIMEQNMLNRDHLQGN
EARVHPKTISYCQSRDHSTGGSHHSSDRGSNSTSGSQNQKKGMRAPKMPKHNAVSWGEAP
SAPHANAWDCDDYSLPMDRSFDAEERTETCPTPPVRGPASSPPEVSFGHPPMTSPQGDPN
SDLHNGAEHLSPHISSHPGPLSPTHTYSSIPLCLDTDEHEEDEEEAEEEEEEEEEEETDA
ELADSRYSQHHNKQKHKHQLHLPTPHKLLFHGLDQTPASSTGDLDKSVTGSMVNSWGSAS
EDNISSGRSSVVSTSEGSFFTDGDFNQAVASSRDIVGLRMCRYPEDPGQRHQRPSSPLST
DSNMSPAITHKRPRRHKPSQCGQQGCPPPKDVFNDDTCMPLSFSSQMSHGDYKARGATLP
RMGSVEARGRRGSAGTHRVREGAFEQRESQDKHKSPLGGKGSGKGRQSSESGDILLYSRP
SFPSGQAQRESDHPNPSTFMSCGDSRTKQGGQDEEFLKS
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctgaacactcgcctctcatgttccttctcatcagcctgttgtacgtcagccag
gtgcagcacagccacactatggacatgtcatcagataaacaaggagcaaacaatgagctc
atcacccaaacacctgcatctggacaagacaacagccttggatacaaagggtctcgtctt
cgtcaggaagacttccctcctcgcattgtggagcatccctctgaccttattgtgtccaaa
ggggaaccggccactctcaactgtaaggcagagggtcgtccagcccccacggtggaatgg
tacaaagacggggaacgcgtcgagacggttcgcgacaactcccgctcccaccgcatgctg
ctgcccagcgggtccctcttcttcctgcgcatcgtccacggacgccggagcaaaccagac
gacggcagctatgtgtgcgtggcccggaactatctgggccaggcgatcagtcacaacgca
tcactggaagtggccattttgcgcgatgacttcagacagaaccctgtggatgttatggtg
gcggtgggtgaacctgcggtgctggagtgtcaaccaccacgagggcaccctgaacccacc
atctcctggaggagagatggagttactctagatgacagagatgaacgtatcacaatccgc
agtggtaagctgatgatcaccaacaccaggaagagcgatgcagggaaatacatctgcgtt
gggaccaacatggtgggggagagggagagcgaagtcgctgaactcactgtgctggagcgc
ccaacctttgtaaagcggcctaacagcgtggtggtgttggcggaggagagtgtggagttc
cactgtgtcgttcaaggagaccctgttcccactacccgctggaggaaagacgattctgaa
ctgcctaagggcagatttgaaatcctcgaggaccatactttgattgttcgccaggtgacc
tcctcagatgaaggctcctatacgtgcgtggtggagaacatggttgggaagtcggaagca
tccgccacgctcactgtacacgtaaacactgtgcccccagcatttgccatacggcccagg
aaccaggtggcgacagtgggcaggacggtcaccttccggtgtgaggccaccggaaacccg
cagcccgctatcttctggcagaaggagggcagcgagagtctgctgttctcttaccagcca
ccacagccctatagccgtctgtctgtctcccagatgggcagcctgaccattactgatgtt
cagcactctgatggcggcatgtacagctgccaggctctcaacatcgctggcagtgttatt
accaaagcactgctggaggtcacagactctggcacagaccaccctccccctgtgataagg
cagggcccagttaaccagactgttcttgtggacagcacaattgtcctggggtgcaaaaca
gctggccattcatctcctacagtccactggaagaagaacgacgtgctgttgacgtcggtg
gactcccgcatatccacaaccgacacgggatcactggagattcgacaaacgaagctggca
gatacaggcttctacacttgtgtagcttctagtccaaatggacaggcttcctggacagca
tacgtgcaagtggcagagtttggggtccatgcagttcatcccacagaccctaatctggtt
cctagcgcgccatttaaacctgaggtgaccgacatcagccgcacctctgtcagtctgtca
tggaaaaccaaccccagtgctggagccaaggctacatcttaccttatcgaggcgttcagt
tatacatcaggcagcagatgggtgaccgtagctgagcatgtgaagacagagacctttgtc
ctgcagaacctgaagcctggagctgtctacctcttcatggtcagagcagcgaatgcttac
ggcctcagcgaccccagccccatctctgatgccgtcaggacacaggacagcacttccacc
atgcagggcgtggatcaccgtcacatcgagagggagctgggagatgtcgcgatccacctg
cacacgccagctgttgtgtcgtcgtctgcggtcaggctgcagtggatggtcgagcagcag
tccccgtacacccagggttacaaggtgctctacagggcatccgccgcgcacggccagccc
gagagtcagtggagcgtcctggatgtacgcaacccacgggaggacggcgtggtgatcggt
cagctgaagagaggggccatctacgagttcaaagtgcgaccgttcttcgatgagttccag
ggagccgacagtgaggtcaaggtggtccggacgttggaagaagctccaagaagagcaccc
cagggtgttacagtgacaaagagtgacaccaatggaactgccatcctaattgcttggaaa
ccgcctccagattcagaagaggcaggagtcatccaggagtacaagatttggtgcctgggc
aacgagagccgctaccacgtaaaccagacggtcgacggctcctcctcctctgtgctcatc
tccggtctagcgccgggaatccgttacagtgttgaggttgcggccagtaacagtgcagga
cccggggtcaggagcgatgtcacgttctttcaattagactctgcagggcagatgatggac
atcagtgaggagagagacaccttctctcagatctcagatgtggtgaggcagccagccttt
attgctggcattggcgccacctgctggttggtcctcatgattttcagtgtttggctctac
cgccacagaaagaagagaagcggcctgagcagcacatacaccgggatacgcaaagttcca
tccttcaccttcacaccgacagttgcgtatcaaagaggggaatctgtgtgcggtgctggc
agacccggcctcctcagtatgggtgaacctctgaaccagctgtggctgccagacaattgg
ccaaatgcatgtgccaatcacaaggactgtagcatcaactgctgtaataatggcaatggt
accagtgacagcaacatgacaacatacagccggccagctgactgcatcgccaactatgga
aaccacgcggaaaacaaaccggggggccagctcgctcccgagatggccatctacagcgac
gtgaacctctccaacaagctcaatgagattaaaaccttcaacaacgccaacatgggctac
gtgagtccggggggggattcggcggccatgtatgagcccatcccgtacgccaccactcag
ctcatccaggccagcatcaagagcaaagcctctactggcggcgctctcgcggagcccctg
gacatgccgtgctggaagcagccccccaaccctccccccataccgaaggagatggcagca
cagatgcagtacaacataatggagcagaacatgttaaacagagatcacctgcagggaaac
gaggcgagggtccatcccaaaaccattagctattgccagagccgcgatcacagcacagga
ggctcccaccacagctcagacagaggcagcaacagcacctcagggagtcagaatcaaaag
aagggaatgcgggccccaaagatgccaaaacataatgcagtaagctggggagaggccccg
tctgctcctcatgccaatgcctgggactgtgatgattatagcctacccatggacagaagt
tttgatgcagaggagaggacagaaacctgtcctacgccacctgtgcgaggaccagcctcg
tccccgcctgaagtgtcctttggtcacccacctatgacatcaccacagggggacccgaat
agtgacctgcacaatggagctgaacacctgagcccacacatcagcagccaccctggtcct
ctctccccgacacacacatacagctccatccccctctgcttggacactgatgaacatgag
gaggatgaggaggaggcagaagaagaggaggaggaggaggaggaggaggagacagacgca
gagctcgccgacagccggtacagccaacaccacaacaagcagaagcacaaacaccagctg
cacctccccactccacacaagctgctcttccatggcctggaccagaccccagcctccagc
actggggatctggacaaatcagtcacaggctccatggtgaacagctggggctcagcatct
gaggacaacatctcatcaggcaggtccagtgttgttagcacctcagaaggatccttcttt
accgacggcgatttcaaccaggcggtggcctcttcacgcgatatcgtaggcctgcgcatg
tgcagataccccgaggatccaggccagcgtcaccagcgtcccagcagcccgctgtccaca
gacagcaacatgagtcctgccataacacataaaagaccccggagacataaaccgagccag
tgtggtcaacaaggctgcccaccacccaaagacgtcttcaatgacgacacctgcatgccc
ctgagcttctccagccagatgtcccatggcgactataaagcgaggggggccacgctgcct
cggatgggctctgtggaggcgcggggtcgacgaggcagcgctgggactcacagggtgaga
gagggcgcgtttgagcaaagggagagccaggacaagcacaagagtccactgggagggaaa
ggaagtggcaagggccgacagagctcagaatctggggacatcctcctgtacagtcgcccg
tctttcccctcaggtcaggctcagagggagtctgaccatcccaacccatccacctttatg
tcatgtggagactcgcggacgaaacagggaggacaggatgaagagtttctgaaaagctaa
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integrated database retrieval system
