Solea senegalensis (Senegalese sole): 122779659
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Entry
122779659 CDS
T07721
Name
(RefSeq) HMG box transcription factor BBX isoform X1
KO
K21643
HMG box transcription factor BBX
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122779659
Transcription factors [BR:
ssen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122779659
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF2028
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
122779659
NCBI-ProteinID:
XP_043898160
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All DBs
Position
LG13:8872052..8891957
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AA seq
869 aa
AA seq
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MKGGGRGKEPPVIGEVAGKRPKRKCLQWHPLLSKKALDFSEEEEEDDEEELEKQPLLCGQ
DQGPQMECGSTTEDMEEDSNEQRARRPMNAFLLFCKRHRSLVRQEHPRLDNRGATKILAD
WWAVLEPKEKQKYTDMAKEYKDAFMKANPGYKWCPTTSKPVKTPSCQPVSSPRKKVWSFS
SNTSKDSTTAKKVPKTDSTPQLNFAMADPTKMGGLSMLLLAGEHALTNKEIPSSTKPSLP
DTASEEKCFPGDKEEMLSGAVPNSELDVTESKVKSALSPLAESSQSTAAEGKPCSQSALF
QLAEMCLASEAGKMDTAVSQPEDSSSEASVLQNAPKPEIKEEKPDPSNCPPSSHTAVPSP
SISSVTSTSTDAIPQQLSSQNACVKKKGKKKEATKSLDNSESPCAAKKIFKKPSNAESDV
DSVFNTIEAVAKGAWKDTEEKPKKKILGSPSGGSAGLPKKKSRPKVKASVKEKEEKMDSD
SGPCGQNSSPEVEMKEEMTHDSPKTEAEQASMESTELQGSVAEPHHSSGDSSPAKLQEED
KGKERQGELTFESSLESRGSRKSERSCKGALYKTLVSEGMLTSLRANIDRGKRGAFRASD
DANWCDDSWAVAQLGPNNPKKLKKSKSKDESTPGLGKLEEEFEKKFNSLPQYSPMTFDKK
GTTVAKKKKTDNAAVQEESSKVGKGPSPSQKKTSFHKIVRKHKHKKEKPGAVDKALQSDS
TVLDSASKAKSCAPVATMCPDAQGTTSMEMLVGSQKRKARKTKITHLVRTADGSVSPAEE
DKMRDLNQEQDKKPLHQPNLCNEKGCYSNPDPEEAERNTLSQELPAFFSLAALAEVAAME
NVHRGQRGLAESQKKELTQTPVLISCADQ
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtggcggaaggggtaaggagccacctgttataggagaggtcgctggcaagcgc
cccaaacgtaaatgccttcagtggcacccacttctctccaagaaggctctggatttctca
gaggaggaggaagaagatgatgaggaggagctggagaagcagccattgttgtgtggccag
gaccagggcccgcagatggagtgcggcagcacgacagaggacatggaggaggactcgaat
gaacaacgagcacggcggccaatgaatgcgttcctcctcttctgcaaacgccaccggtct
ctggtgcggcaggaacaccctcgcctggacaaccgcggggccacaaagatcctggctgat
tggtgggctgtgctggagcccaaagagaagcagaaatacactgacatggccaaggagtac
aaggacgccttcatgaaggcaaacccaggctacaaatggtgtcccaccaccagcaaacca
gtgaagactccttcctgtcagccggtcagcagtccccgcaaaaaggtctggtccttctct
tccaacacgtccaaggactccaccactgccaaaaaagtgcccaaaactgacagcacgcca
cagttaaactttgccatggcagatcctacaaaaatgggaggccttagcatgctgctatta
gctggggaacatgccctcacaaacaaggagatcccttccagcactaaacctagtttacct
gacacagccagtgaagagaagtgtttccctggggataaggaagagatgctgtctggagca
gtcccgaacagtgagctcgacgttactgaaagcaaggtcaagtctgccctttctcctctg
gcagagtcgtctcagtctacagcagctgaaggaaaaccatgcagtcagtcagctctcttc
cagctcgctgagatgtgcttagcttctgaagctggaaagatggacacagctgtgtctcaa
ccggaggacagctcatctgaagcctctgtcctgcaaaatgcaccgaagccagagatcaag
gaggagaaaccagaccctagcaactgtcctccctcttctcacactgcagtcccctcaccc
tcaatctcctctgtcacttctacctccactgatgccattccccaacaactcagcagccaa
aacgcatgtgtcaaaaagaagggcaagaaaaaagaggcgaccaaatcactcgataacagc
gagagtccttgcgcagcaaagaagatcttcaaaaagcctagtaacgcagaatcagacgtg
gatagtgtttttaatacgattgaagctgtggccaaaggggcatggaaggacacggaggag
aagcccaagaagaagatcctaggcagtcccagtggtggaagcgctggtcttcccaagaag
aagagcaggcccaaagtcaaggcctctgtgaaagaaaaggaggagaagatggattcagac
agtgggccgtgtggacagaacagctctcctgaggtggagatgaaggaggagatgacacac
gatagccccaagacagaagcagagcaagcaagtatggaaagcacagagcttcagggcagc
gtggcagaaccccatcactcctccggcgactcttcacctgctaagctccaagaggaagac
aagggaaaggagaggcagggtgaactgacctttgagtccagcttggagagccgtggctcc
aggaaatcagaacggagctgtaaaggagccttgtataaaactctagtttctgaggggatg
cttacatcactgagagccaacattgaccgaggtaaaagaggagctttccgtgcgtccgac
gatgcaaactggtgtgatgacagctgggctgttgcacagttgggacctaataaccccaag
aagctgaagaagtccaagtccaaagatgaatctacaccgggcctcgggaaactggaggag
gagtttgaaaagaaatttaacagcctaccacagtatagcccgatgacatttgataagaag
ggcacgactgtggcaaagaagaagaagactgacaatgccgctgttcaagaggaatcctct
aaagtcggaaaagggccatctccatctcagaaaaagacttcattccacaagattgttagg
aagcacaaacacaaaaaggagaagccaggtgcagtggacaaagcgctgcagagcgactcc
accgtgctggattcagcttcaaaagccaaatcatgtgcccctgttgccacaatgtgccca
gacgctcagggcaccactagtatggagatgctagttggtagccagaagaggaaggcgagg
aagaccaagatcacacacttggtgcgcacagccgacggcagtgtgtctccagctgaggag
gataaaatgagggacctgaaccaggaacaggataagaagccattacaccaaccgaattta
tgcaatgaaaaagggtgctacagtaatcctgacccagaggaggcggagaggaacacccta
tcacaggagctacctgctttctttagcttggcagcccttgccgaggtagcagccatggaa
aatgttcacagaggacagagaggcttggctgagagtcagaagaaagagcttacgcagact
ccagtcctcatctcctgcgctgaccagtga
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