Solea senegalensis (Senegalese sole): 122779794
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Entry
122779794 CDS
T07721
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122779794 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122779794 (nup98)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122779794 (nup98)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122779794 (nup98)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122779794 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
122779794
NCBI-ProteinID:
XP_043898351
LinkDB
All DBs
Position
LG13:7781945..7802433
Genome browser
AA seq
1847 aa
AA seq
DB search
MFNKSFGTPFSGGTGGFGNTSTFGQQNAGFGTTGGFGAAGGFGATANTGGLFGTTQNKPG
GLFGSNTFSQPATSSTSTGFGFGAASGTSTSLFGNTGTGTTGGLFSQTNNAFGANKPTSF
GSFGTSTSSGGGLFGATNTASNPFGGTNSLFGGSGFSQAAQQPGTTVKFNPPTGSDTMVK
AGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAPATGGLFGTATATSS
ATPGLFGATAPNTSFSFGQNQKTTFGAAPATGFGNATGSMFGQQSQQQAGSFFKPFGQTT
TAQNTGFSFGNTNTMGQANTSSMGLFGNTAASQAGGLFGAAQTASTATGFGTGTGLFGQT
NPGFGTAGTQPSLFGNKTAGFGTTTTSAPSFGTGAGLFGTNKPALTLGTGTNTSTFGFGA
AAAGGSLFGNKPATGGLGTGLGTSFGTAVGTGQTSLFGNNQNKLGTTLGGIGAFGTAGFN
TGTSSLGFGAPQQPVALTDPNAAAAQQAALQQQLSVLAYSPYGDSPLFRNPLSDPKKKEE
RLKPTNPSAQKALTTPTHYRLTPRPATRVRPKSLSSSSSSKSQLFDGLDDDEPSLTNGAF
VPRKSIKKLVLKNLNSSQYNSQTETETDDLASPSEYPQNGHSLVQEEEELRELASSRGGR
GDDHEVTQFYVNPIAKPIPQGRTQSSLQDTISDLNMHKAARNGLELSSDDVSASLGEESL
QEDREEEQQEAQQSPHPAGVVLNRLGYYTIPSMKDLADMVDESGECAVENFTVGRKGYGS
IFFPGEVNVTGLNLDEIVFFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKTSC
TQIRSPERLSDMNYEGRLEKASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEDEDI
PLKTDPKKLKTMMSLPPSKLQQQLSPSQQQVAPQAQSTVAVDAPGAVVELDSDMADITQS
FPPERLLGRKENGGNLPVGELSDTMSEKLGGWISAEHDGISASGHMATALGINPHTLQIM
KASLFVVDEEESDMFQDRGAVKVTADVSSPRLVKPGAQSRPSVGGLLQARFTSGLLSQLP
DSPRPPHPPSLSRASPVFGDTPRPLHWPGPAPSFLLPPRTPEPSIRTIGARRLGGPVPLK
ESIVSGKGGLLMDTGLFMGRTFRVGWGPGWTLAHCGERLSSRTSKQLERQELTTRTDFSF
LPKPARNKPLTQSPYKVVLEQLEGLEPPMMKTSEEEDDEDSQAVLQRPLEICLEHSTIST
ADESACPLVRPQPGVAALHEYAKWITELNEQQGEADALLGHWAEVWTLCEALWGQVGPDQ
EADLETPSDYKQQLERRQTFSAWLSRGATCRVEEEVSVTGKGGHTEAIFSYLTGNRISEA
CRLAQKEGDHRLSLLLSQAMGSQYCRELLALQLADWNRMQTDCYLPEERLRIFTLLAGKP
VWQSSDDSVVNVCSQLDWKRCVAVHLWYMLPPTASVADALVKYEAAFQGSGEGGRYAYAP
LPPYLEAETEEMEEEEAESRQPLYDVCFHLLKLYSDRHYSLQQLLDPLAVTWERLDYRLS
WHLWSVLQALHYTHLSASRQGLLHASYAAQLESTGLWHMAIFILLHIPDHTQRERAVRDM
LTLHCPLQETDESAQRERFLTERLLVPEQWIHEAKATRARRDGDRHQEALHLYRAGFWNQ
CHRLLIQHLASDCIINDNHDYLLEFVEGLSVPEHSATIQDWDTAGRVYLDYIRVIKTLQD
IQQMVNSGYEVERLYTDVTSLCGRIELLPCSTARDRLAQSEMAKRVANILRVVLSLQHGD
STASDSTAVPLNQLAPHVTRLPMPEDYTLEELRGLTQSYLRQLVVGQ
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcatttgggacaccgttcagtggagggacgggcggcttcggcaacacg
tccaccttcggacagcaaaacgccggctttgggacgaccggaggctttggagcggccgga
ggcttcggggcaactgccaacaccggaggactgttcggtaccacacagaataaaccaggt
ggtctgttcgggtccaataccttcagccagccggcaacttcctccaccagcacgggcttt
ggttttggtgcggcgagcggtacgtccaccagtctatttggaaacactggaactggcaca
accggcggactcttctcccagaccaacaatgccttcggcgccaacaaacccacgtctttt
ggaagcttcgggacgagcaccagcagtggcgggggcttatttggggcgaccaacaccgcc
tctaacccgtttggcgggacaaactccctgttcgggggctctgggttctcgcaggccgca
cagcagccgggaacaaccgttaaattcaaccctccaacaggaagtgacacgatggtgaaa
gccggcgtgaccacgagcatcaacaccaagcaccagtgcatcacagccatgaaggagtac
gagaacaaatcactggaggagttgagactggaggactaccaggcaggaaggaagggccca
accaatccgatggcacctgccaccggcggcttgtttggtacagccacagccacgtccagc
gccaccccgggcctgtttggtgccacagccccaaacaccagcttctccttcggacagaac
cagaagaccacgtttggagcagcgccggccacaggctttggaaacgcgacaggcagcatg
ttcggacagcagagtcagcaacaagccggcagcttcttcaagccgtttggtcagaccacc
accgcccagaacaccggcttctccttcggcaacaccaacaccatgggccaggccaacacc
agcagcatgggtctgtttggaaacacggcagcatctcaggcaggcggcttgtttggcgca
gcgcagaccgccagcactgccactggctttggcaccggcaccggactgttcggacaaacc
aaccccgggtttggaaccgctggcacacagccaagtttatttgggaataagacggccggg
tttggcaccaccaccaccagcgctccgtccttcggcaccggcgctgggctctttggaaca
aacaaacccgcactgacactgggaaccggcaccaacacctccacctttggttttggcgcg
gccgctgctggagggagtctgtttgggaataagccggccactggaggactgggaaccgga
ctgggaaccagctttggaacagcagtgggcaccgggcaaacgtctctgttcggaaacaac
cagaacaaactgggcacgactctcggcggcatcggagcattcggaacggccggattcaac
accggaaccagcagcctgggcttcggggctccgcagcagcccgtcgctctcacagatcca
aacgcagcggctgcccagcaggcagcgctccagcagcagctcagcgttctggcttattca
ccgtatggtgactcgccactcttcagaaacccactgtcagaccccaaaaagaaagaggag
cgtctgaaaccaaccaacccctcggcccagaaggctctgaccacgcccacacactacagg
ctgaccccgcgacctgcgaccagagtccgccccaagtcactgtcatcgtccagctcttca
aagtcgcagttgtttgacggtttggacgacgatgagccgtcactcaccaacggagccttc
gtaccgaggaaaagcatcaagaagctggtgctgaagaacctgaacagcagtcaatacaac
agtcagactgagacggagacagatgacctggcttcaccatcagagtatccacagaatggc
cacagccttgtgcaggaagaggaggagcttagggagctggcaagctccagaggtggccga
ggggacgaccacgaggtcacccagttctatgtaaaccccatcgccaagcccatcccacag
ggccgtacacagagcagcctgcaggacaccattagtgacctcaacatgcacaaagcagcc
aggaacggtctggagctgagcagtgacgacgtgtcggcttctctgggggaggagtctctg
caggaggacagagaggaggagcagcaggaggcgcagcagtctcctcaccctgcaggcgtc
gtcctcaaccgtctgggttattacaccatcccctccatgaaggatctggccgacatggta
gatgagagcggcgagtgcgcggtggagaacttcaccgtcggcaggaaaggttacggctcc
atcttcttccccggcgaggtgaacgtcacgggcctcaacctggacgagatcgtctttttc
agacgcaaggaggtcatcgtgtacccggacgacaagaacaagcctcctgagggggagggg
ctgaacaggcgcgcagaggtgaccttggacggcgtttggccgaacgacaagacgtcgtgc
acgcagatcaggagcccggagcgtctgtccgacatgaactatgaaggccgcctggaaaaa
gcctcgcggaaacagggcgcgcgtttcctggagtacagacctgagacgggatcctgggtg
tttgaggtggcccacttttccaaatatggcctccaggactctgacgaggatgaggatatt
ccgctcaaaaccgaccccaagaagctcaagaccatgatgtcacttcctccctccaagctg
cagcagcaactctcccccagccagcagcaggtggcaccacaggctcagtccactgttgct
gtggatgcccctggggccgtggtcgagctggacagcgacatggccgacatcacacagagc
ttcccgccagagaggctgctcggaaggaaggagaacggcggcaacctgccggtgggcgag
ctgtcagacacgatgagcgagaaactcggaggttggatctctgccgagcacgacggcatc
tcggcgtctggccacatggcgacggcgctgggcatcaacccacacaccctgcagatcatg
aaggcgtctctgttcgttgtggacgaggaggagagcgacatgtttcaggaccgaggagca
gtgaaggtcactgccgacgtctcgtctcctcgcctcgtgaagccgggagctcagagccga
ccctctgtgggtggtcttcttcaggctcgttttacctcgggcctcctctctcagctccca
gactccccccgccctcctcaccctccttctctctcccgagcgtcgccagtgtttggtgac
accccccgccctctgcactggccagggccggccccttccttcctgctgccgcctaggact
ccagagccgtccatcaggaccatcggcgcacggcgtctcggcggccccgtccccctcaag
gagtccatcgtctcagggaagggaggtttgttgatggacaccggactcttcatggggcgg
acctttcgggtcgggtggggacccggctggacgctggcgcactgcggcgagcggctgagc
tcacggacttccaaacagctggagcgccaagagctgaccaccaggacggacttcagcttc
ctgccgaaacctgccagaaacaaacctctcactcagagtccgtacaaggtggttctggag
cagctggagggtctggagcctccgatgatgaagacgagcgaggaggaggacgatgaggac
agtcaggctgtgctgcagcgccccctggagatctgtctggagcacagcaccatcagcacc
gcagacgagtccgcctgtccgctggtgcgaccgcagcctggtgtggcggcgctgcacgag
tacgccaagtggatcacggagctgaacgagcagcagggggaggcagacgctctgctgggt
cactgggccgaggtctggactctgtgtgaggcgctgtggggtcaggtcggtcccgatcag
gaggccgacctcgagacgcccagcgactacaagcagcagctggaaaggcggcagaccttc
tcagcgtggctgtcgcgcggcgccacctgcagggttgaggaggaagtgtctgtgacgggc
aagggcggccatacggaggcgatcttcagctacctgactggaaaccgcatcagcgaggca
tgtcggctcgcacagaaagaaggtgaccaccgtctgtccctgctgctgtctcaagccatg
ggctcccagtattgccgtgagctgctggcgctgcagctcgccgactggaatcgcatgcag
acggactgctacctgcccgaggagcgactgcgcatcttcacgctgctcgcgggaaaaccg
gtgtggcagtcgtcagacgactctgtggtgaacgtttgctctcagctggactggaaacgc
tgcgtcgccgttcacctgtggtacatgctgcctcccaccgcctccgtggccgacgccctc
gtcaaatatgaagctgcgttccagggctctggtgagggagggaggtacgcgtatgccccg
ctacctccctacctggaggcggagacagaggagatggaggaagaggaggcagagtccaga
cagccactgtacgacgtgtgcttccacctgctcaaactctacagtgacagacactacagc
ctgcagcagctgctcgatcctctcgccgttacctgggagcggctggactatcgcctgagc
tggcacctgtggagcgtcctgcaggcgctgcactacactcacctgagcgcctcgcggcag
ggactgctccacgccagctacgctgctcagctggagagcactggactgtggcacatggcc
atcttcatcctgctgcacatccccgaccacactcagcgggagcgagcagtgcgggacatg
ttgaccctccactgccccctgcaggagacggacgaatctgcgcagagggagcgcttcctg
accgagaggctgctggtcccagagcagtggatccacgaggccaaggccaccagagcccgc
cgcgacggggacagacaccaggaggcactgcacctgtaccgtgctggattctggaaccag
tgtcaccggctgctgatccaacacctggcctcagattgcatcatcaacgacaatcacgac
tacctgctggagtttgtggagggactgtcggtccctgaacacagcgccaccatccaggac
tgggacactgcaggaagagtttacctggattatatcagagtcatcaagacactgcaggac
atacaacagatggtaaactctggttatgaagtagagcgtctctacacagacgtgacgtct
ctgtgtggcagaattgaactcctgccctgcagcaccgccagagaccgcctcgcccaatca
gaaatggcgaagcgtgttgctaacatcctgcgtgtggtcctgagtctccagcacggtgac
agcacggcgtccgactctaccgcagtgccgctcaaccaactggcgccgcatgtcacccgc
ctgccgatgcctgaggattacacgctggaggagctgagaggactcacgcagtcgtacctg
aggcagctcgtcgtcggccaatga
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integrated database retrieval system
