Solea senegalensis (Senegalese sole): 122779887
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Entry
122779887 CDS
T07721
Symbol
srsf1b
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03040
Spliceosome
ssen05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122779887 (srsf1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122779887 (srsf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssen03041
]
122779887 (srsf1b)
Spliceosome [BR:
ssen03041
]
Common components
Common spliceosomal components
SR proteins
122779887 (srsf1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
RRM_7
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
122779887
NCBI-ProteinID:
XP_043898485
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All DBs
Position
LG13:22540517..22544511
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AA seq
255 aa
AA seq
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MSGGGVVRGPAGSNDCRIYAGNLPPDIRSKDVEDLFYKYGSIRDIDLKNRRGGPPFAFVQ
FDDPRDAEDAVHGRDGYDYDGYRLRVEFPRGGRGGGGGGGGGGGGGAMGPPRGRYGPPSR
RSEYRVVVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDN
TKFRSHEGETSYVSVKTDGPGSPSYGRSRSRSRSRSRSRTRSRSFSPRRGRASPRHSPRR
SRSRSRSSSRSRSRT
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcggaggcgtcgtccgtggacccgcggggagcaacgactgtcggatctacgcg
ggaaatctcccgcccgatatacgctccaaggacgtggaagacttgttctacaagtacggt
tcgatccgcgatatcgatctgaaaaaccgaagaggaggacctccgttcgccttcgtccag
tttgacgacccgagggatgctgaggatgctgttcacggacgggacggttatgactacgat
ggataccgcctgcgtgtggagtttcctcgaggtggaagggggggaggaggaggaggagga
ggaggaggcggcggcggcgctatgggaccgccgaggggacgatacggtcccccgtcccga
cgctccgagtacagggttgtggtgtcaggtcttcctcccagtggaagctggcaggacctg
aaggatcacatgcgagaggcaggtgatgtatgttatgctgatgtgttccgtgatggcact
ggagttgtggagtttgtacgcaaagaagacatgacctacgctgtccgtaaattggacaac
accaagtttcgttctcatgagggagagacgtcctacgtcagcgtgaagaccgacggtccc
ggcagccccagctacggtcgttcccgctctcgtagccgcagtcgaagccggagcaggacc
cgctctcgcagcttctcccctcgccgcggccgggcgtctccacgtcactccccccgacgt
tctcgctcccgttcccgttccagctctcgctctcgctcccgcacctag
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