Solea senegalensis (Senegalese sole): 122779906
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Entry
122779906 CDS
T07721
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122779906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122779906
03036 Chromosome and associated proteins [BR:
ssen03036
]
122779906
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
122779906
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122779906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
FAS_AT_central
Motif
Other DBs
NCBI-GeneID:
122779906
NCBI-ProteinID:
XP_043898512
LinkDB
All DBs
Position
LG13:complement(16758138..16790904)
Genome browser
AA seq
1892 aa
AA seq
DB search
MFSTTPNKLNLLVNKLHQYLAHSAVEDSNGTPTAEDADGQKHHSCSMVMSKGHTAAEAGA
DNRYSRRKPSVVIKHSGLDHSGDSNASEDVELPVNENGHLDITRLPKGTVLVRPEPVDNG
RDYFRGPEFRTRKSGVLRKEFSRRRRGEEHMGIVSCTACGRQVNHFKKDTFYRHPVLKVL
ICKSCFKYYLSDDISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILRNLGRKELSG
ILESKWYCYVCSPEPLFNLVLACDNVLENMEHLCQQQRRRNPVEPEKSELYDMLPHLPQN
IALDKWDHTGMDGNVVFNYSTLQISKELTKKAKHLVDSTNVLNRTFVSFINTATVNKQAP
NVRHLYLKSFLSVVKGLRKSLAVFEDGLKEEFIDLDVLSCWEKYLSDDFDSQPAADTELD
MSDETRLSDLQKLAAELVEDDESDAKCFIDGSVQDCPGEDVDSASHDSTQTTQKTDQKPS
ETEINMTKKLVVKLTPVPVEKEASSNATEMDDTINSIDKKSKGKDEPEHSETVAPCAKID
RKISNDSTSASRLLEEELGNRRSPRVKTTPLRRPSDVKAQTSLSPADSESDSDPEVTITT
APAKNTEEQSLSTARDDSDSDEVPPALLERAAMTQSSDEAQSDEDDAKASTKVAKKCLFW
LNKNTPISPKKMCRKRKMLDRSHKSESSDRRVKARRGSGTDLSSDEQDLQKDMQCINKLS
SRGKCHLIKREEEGLTRKQGRLRAVKSKPNYRQEVMESSSSSSEDERDDNSGSDGSDQKM
KPITDDVSLLGAAAFHQSSGDEEQSGPSWAAEDDDDPENRIAKKMLLAQIKANYSSGDDI
SSDEETLEEESESEVDKEIKQSIEENGADESGEDLTSESSETTSTEPNFRHHLLQHKLTL
DEGASSHESIGKQGSKKRKKSSDSESGSEIIALSLEDLGLSEELSQSEDETNEDVPNRSS
SKMKESCLGSEENEKVPCIWLSDSDVEKSDREDDKTNSQGTPKGRKKIRKILEDDNLLPE
TQEALREEEERCERLRNRDQHLEERREIINVGDELSQVLCPVTTKLVLDQDEETKEPLVQ
VHTNLLTRLKPHQVDGVQFIWDSCCESVKKANSAPGSGCILAHCMGLGKTLQVVAFLHTV
LLSKNLKFKTALVVCPLNTILNWVSEFKKWQENMGQDKVKVAQLATQKNFPERLHALQTW
QRDGGVMIMGYEIYRIMSLANKIVREQWKAELKRILVNPGPDIVICDEGHILRNNASNIS
KALNAINTRRRVVLTGTPLQNNLVEYHCMVSFIKKNLLGSLGEFRNRFINPIQNGQCADS
TPKDVRIMKKRAHVLHAMLAGCVQRRDYSELSQFLPPKHEYVLAVRVSPLQYKLYRYYLD
HVTGVGPMTNTAKMKVGANLFKDFQALSRVWTHPWCLQLNYISKVKKGYFEKDRQKAIAL
ANEEATVAESATAGYNPSRTVIIDDSSSKDAPAVDGAIATTSSRSQSAGEGWYKTMLSEK
DATILQHSGKMVLLFEILRMAEELGDKVLVFSQSLISLNLIEDFLKASHQARHPASVKGS
WIKNVDYYRLDGAVSAVHRMKWADLFNDATNVRGRLFLISTRAGSLGINLVAANRVIIFD
ASWNPSYDIQSIYRVYRFGQVKQVFVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQIE
RHFTLFELSELYTFEPDLLNDPNSKKSKRATSAPPKDEVLAQLLQTCNDQIVSFHEHESL
LDHKQEEELSEAERKAAWAEYEAESNAPSLLVNSSQDSLDMKTNEQLLELLNKCRANVSE
AFLALQKMKHHTIDDYMAQTRLQYPQLLEADVKIKAEIWRQWDIKEQERRQAFYRDVLSH
QQSLTLRIQSILNSRRNQVMQTSAALNQPGRT
NT seq
5679 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaccactcccaacaagctgaacctgttggtcaacaagttgcaccagtacttg
gctcattctgctgttgaagacagcaatggcacaccaaccgcagaggatgctgatggtcaa
aaacaccacagctgttctatggtgatgtcaaagggtcatacagcagcagaggcaggagca
gataacagatactcaaggagaaaaccttctgtcgtcataaagcactcaggactggatcat
tctggggactcgaatgcaagtgaggatgtggaattgccagttaacgaaaatggtcacctt
gatataactagactacccaaaggcactgtgctggtcaggccagaacctgttgataatgga
agagattacttcaggggtcccgagtttcgcacccgaaaatcaggagtgctgcgcaaagag
ttctccagaagacgtagaggagaagagcacatgggaattgtcagttgcaccgcatgtggc
cgacaagttaaccacttcaagaaagatactttctaccgccatccagttctgaaagtactc
atttgcaagtcttgcttcaagtattacctgagtgacgacatcagcaaggatggagatgga
atggatgagcagtgcagatggtgtgccgaaggaggcaacttgatctgctgtgacttctgc
agtaatgccttctgcaagaagtgtattctgagaaatttgggaaggaaggagctgtcgggc
atcttggagagcaagtggtactgctacgtgtgtagcccagagccactttttaatctagtg
ttggcctgtgacaatgtcctcgagaatatggagcatctgtgtcagcagcagcgcagaaga
aacccagtagagccggagaaatcggaactctatgacatgttgcctcacttaccacaaaac
attgctttggataaatgggatcacacagggatggatggtaatgtggtgttcaactacagt
acacttcagatttcgaaggaattgaccaaaaaggccaaacatttagtggactcaacaaac
gtgttaaaccgcacgtttgtcagtttcataaataccgcgacagtaaacaaacaagcgcct
aacgttcgccatttgtacctaaagtcttttttgtctgtagtaaaaggcttgcgaaaatca
cttgctgtgtttgaagatggccttaaagaagaattcatagacttggatgtcttaagctgt
tgggaaaagtaccttagtgatgactttgactctcagcctgcagcagacacagagttagac
atgtctgatgagacacgtttgagtgacttgcagaaattggcagctgaacttgtggaagac
gatgaatctgacgcaaagtgtttcatagatggtagtgtgcaggactgccctggggaggat
gtggattcagcttcacatgattccacacagacgacacaaaagaccgaccagaagccctct
gaaactgaaatcaatatgacaaaaaaactagtagtcaaacttacacctgtccctgtggag
aaagaggcctcctctaatgccacagagatggacgacaccattaactcaatagataaaaag
tccaaaggaaaagatgaaccagaacatagtgagacagttgctccatgtgctaaaattgac
cggaagataagcaatgacagcaccagtgcatctcgactcctagaagaggaactaggcaat
agaagatctcctcgtgtcaaaacgacacctttgcgacgaccaagtgatgtcaaggcccaa
acatctctttcaccagcagacagtgaaagtgattctgacccagaggtaaccatcaccaca
gcaccagccaaaaacactgaagagcaaagtctaagcacagcaagagatgactcggactcg
gatgaagttcctccagctctgcttgagcgagcagctatgactcagagctctgatgaagct
cagagtgatgaggatgatgccaaagcatcgacgaaggtggccaagaaatgtctcttctgg
ctcaataagaacactccaatctcacccaagaagatgtgccggaaacgcaagatgctagac
cgctcccacaagtccgaatctagtgacagaagagtcaaagctagaagaggaagtgggaca
gatctctccagtgatgagcaagacttgcagaaggatatgcaatgcataaacaagctgagt
tcaagaggaaagtgtcacctcattaaaagagaagaggaaggattgaccagaaagcaggga
agactaagggcggtgaagtctaagcctaattatcgtcaggaagtaatggaatcatcatcc
tcatcaagtgaagatgaacgggacgacaactctgggagcgacggaagtgaccagaagatg
aagccaatcactgatgatgtgtctttactgggagcagcagcattccaccaatcttcagga
gatgaggagcagtctgggccttcgtgggcagcagaagatgatgatgatcctgaaaataga
atcgctaagaaaatgcttttggcccaaatcaaagccaactactcttcgggtgatgatatc
tcttcagatgaagaaacgctggaggaagagtctgagtcagaggttgataaagagatcaaa
caaagcattgaggaaaatggagcagatgaaagtggggaagacttgacctcagaatcatct
gagaccacatccactgagcctaacttcagacaccatctgctccaacataaacttacctta
gatgagggagcatcaagtcacgagagcataggaaagcaggggagcaagaaaagaaaaaag
agctctgacagcgagagtggaagtgagataatagcgctgagtctggaagaccttggcctg
agtgaagagctgagtcagtcagaggatgagactaatgaagatgtgcccaacagatcttca
tctaaaatgaaggagtcatgtcttggttcagaagagaatgagaaagttccctgtatttgg
ttgtctgactctgacgtcgaaaagagtgatcgagaggatgataagactaacagccaaggc
accccaaaaggacgcaaaaagatccgcaaaattctggaagatgataacctcctccctgag
acccaagaagcactgagagaagaggaggagagatgtgaacgactgagaaacagggatcag
cacttggaggagaggcgagagatcatcaatgtaggggatgaactgtcacaagtgctgtgt
cctgtcactacaaagctagtgttggatcaggatgaggagaccaaggagcctctcgttcag
gtgcacacgaacctcctgacaagactgaagcctcatcaggtggatggtgtacagtttatc
tgggacagctgttgtgagtcagtgaagaaggccaactctgctccaggatcaggctgtata
ctggctcactgcatgggcctgggaaaaactctgcaggtggtagcctttctccacacggtg
ctgctgtcaaagaacctgaaattcaaaacagccctggtggtgtgtcctctcaacacaatt
ctcaactgggtcagcgagttcaagaaatggcaagaaaacatgggacaagacaaagtcaag
gttgctcaactggccacgcaaaagaattttccagaacggcttcatgctctgcagacatgg
cagagagatggaggtgtcatgataatggggtatgagatataccgcatcatgtcattagca
aataaaatcgtgagagagcagtggaaggcagagttaaagaggatactggtgaacccaggc
ccagatattgttatttgtgacgagggccacatcctacgcaataatgcatccaatatctcc
aaagctttgaatgccatcaacactcgtcgaagagtggtgctgactggaacaccactgcaa
aacaacctggttgagtaccactgcatggtcagtttcatcaagaagaacctcctgggctca
ttgggcgaattccgaaaccgcttcatcaaccccattcagaacggccagtgtgccgactcc
acaccaaaagatgtgcggatcatgaagaagagagcacacgtacttcacgccatgttggct
ggatgtgtacagagaagagattactctgagttgtcccagtttctacctcccaaacacgag
tatgtgctggcagtgagggtttctccacttcagtataaattgtaccgctactacctcgat
cacgtcactggtgtgggtcccatgactaacacagcaaagatgaaggttggtgcaaatctg
ttcaaagactttcaggcgctcagtcgagtctggactcatccctggtgtcttcagcttaac
tacataagcaaagtaaaaaagggatattttgagaaggaccggcaaaaagcaatagctctg
gcaaatgaagaagccactgtagctgagagtgcaacagcaggatacaatccaagcagaact
gtgattattgatgattcgtcgtccaaagatgctcctgcagtagatggagcgatagcaacc
accagctcgaggtctcaaagtgcaggtgaaggctggtacaagactatgttatcggagaaa
gacgccacaatcctgcagcactcagggaagatggtgctcctgtttgagattctcaggatg
gctgaagagctgggggataaagtgcttgtgtttagtcagtccttaatctcattaaacctg
attgaggatttccttaaggcttctcaccaggccagacacccagcttcagttaaaggcagc
tggattaaaaacgttgattactatcgtcttgatggcgccgtcagtgctgtacatcgtatg
aaatgggcagatctgttcaacgatgctaccaatgtccgcggacgactgttcctcatctca
acacgagccggctctcttggcatcaacctggtggctgcgaacagggtcatcatctttgac
gcctcgtggaacccatcctatgacatacagagcatatacagggtgtaccgctttggtcag
gtgaagcaagtgtttgtttaccgcttcttggctcagggcaccatggaggagaagatctat
gatcgtcaggtgaccaagcagtccttgtccttccgagtggtggatcagcagcagattgag
aggcacttcactctctttgaactcagcgaactttacacatttgaaccagacctgctgaat
gaccccaactccaagaaaagcaagagagccacgtccgctccgccaaaggatgaggtctta
gcgcagctcctacaaacctgtaacgaccagatcgtgtcattccatgagcacgaatctctg
ctggaccataaacaagaggaggaactcagtgaagcagagcgcaaagcagcctgggctgaa
tatgaggccgagtcaaacgcacccagccttctggtcaactccagccaggactccttggat
atgaagaccaatgaacaactattggagctgctgaacaaatgcagagcaaatgtatccgag
gcttttctggctctgcagaagatgaagcatcacactattgatgactacatggcacagacg
cggcttcagtatccacagctgttggaggctgacgtcaagatcaaggctgagatttggaga
cagtgggacatcaaggagcaggagcgcagacaggccttctatcgagatgttctctcacac
caacaatcactgactctcaggattcagtccatcctgaacagtcgcagaaaccaggtgatg
cagacgagtgcagcgctgaatcagcccggacgcacgtga
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