Solea senegalensis (Senegalese sole): 122779944
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Entry
122779944 CDS
T07721
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04517
IgSF CAM signaling
ssen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122779944
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122779944
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssen04812
]
122779944
Cytoskeleton proteins [BR:
ssen04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122779944
Intermediate filaments
Intermediate filament-binding proteins
122779944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
Motif
Other DBs
NCBI-GeneID:
122779944
NCBI-ProteinID:
XP_043898582
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Position
LG13:13238067..13275522
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AA seq
1112 aa
AA seq
DB search
MLMARDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGQELIQEKPELRSVVQQK
LEEIRECWSDLESTTKAKARQLFENNKPEPAVKSYSDLDHQLSHLERQPPQLEQAHHLPT
FNEQLQKFQAMESQIGDFYKDVGELGSLQGVCLPQRGLMAGEKESSEQSGMVETRIVRLI
EPLKERRRILLASKEMHQVAQDLEDEILWIQERLPLAYCKDYGNNLQGVQQHVKKNQTLQ
RELTGRRARVEEVLDRAGIIASLRTPEVEFVREGAGHVRQLWEVLQLETERRSVMLDATL
QAQQYYSEAAKVETWLSGQKLQLASEEKGTDESSTLQLLKAHVALEQTVETYAETVGMLS
QQCQHLLEMGHPESEQLTKQQSHIDRLYVSLKDMVEHRKTKLEQQYWLYQLNKEVEELEK
WITERETVASSTELGQDLEDVTVLQERFTKFASETNNVGQQRMEQVNKMVNEMIDCGHTD
AATIAEWKDGLNESWADLLELMETRRQMLAASHQLHRFFTDCKEVLAQIAGKMKQLPEVR
ACQANITNPATLQRLMHSFEHALQLLVAQVRQLQENAAQLRTIYAGEKAEAIMVKEQEVM
EAWKALLSSCESSRIQVTSVTDKVQFFSVVRENLMWMEGIMGQIGWDEPRDLTALEVMMR
QHQEMKAKIDGRNKTIQQCADLGKILIAAGNPASEEIKEKLDSLLSKQKDLVEKWDKHQE
RLQRKQEQFQFAQETVKAEAWLKAKEPLITSKEPEGGGARAQTDEAEQLILRHEAFRKAA
VTWKERFSSLRQLSAAEKKKEEEKKTTPLSSRRMFPLSCLTPSVASTSATSPFLRQTIKG
HIENKPSQTCLDLGATPASQRLSSALASYNPVINGSGYHGLEQQSSGKLMSSSYLGMNHQ
AAGGGSDSGYSALTSQSGGADTSTYLGINHQTVGSAESSGYFGLTSGCVGNMQNHLSSGR
LGSSGNIAQQTSSGGLGNPSFLPQQNMGSSGYLAQQPNIGSSGYLAQQCNMGSSGYLAQQ
SNMGSSGYLAQQPNMGSSGYLAQQPNTGSSGYLAQQPNMGVLGIWHNSLIRGVLGIWHNS
LIRGVLGIWHNSLIWEVLGIWHSSLTWGVLDT
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgctgatggcccgagacacagcgcgggatgaggctcagaagctacacaggaagtggctg
aagcaccaggcctttatggcagaactggcccgcaataaggaatggctggccaagatagaa
caggagggtcaggagctgatccaggagaagccagagctgcgttccgtcgttcagcagaag
ctcgaggagatccgagagtgctggtccgacctggagagcaccaccaaggccaaggcccgc
cagctctttgaaaacaacaagcctgagccggcagtgaagagctactccgacctcgaccac
cagctctcccacctggagcggcagccgcctcagctggagcaggctcatcatctgcccacc
ttcaatgagcagctccagaaattccaggctatggagtctcagataggggacttttacaag
gatgtgggagagctgggcagcttgcagggggtctgccttcctcagcggggcctgatggca
ggtgagaaggaaagcagcgagcagtcgggcatggtcgagacgcgcatcgtccgcctcatt
gagcccctgaaggagaggcgccgcatcctgttggcttccaaagaaatgcaccaagtcgct
caggacctggaagatgagatactgtggattcaggagaggcttcccttggcttactgtaag
gactatgggaataacctccagggtgtacagcagcatgtaaaaaagaaccagaccctccag
agggagctgacagggcggcgggctcgtgttgaagaggttctggaccgggcgggtattatc
gcttcactgaggactcccgaagtggagtttgtgcgtgaaggggcgggacacgtgcgccag
ctgtgggaggttttgcagctagagacggaacggaggtctgtgatgctggatgctacgcta
caggctcagcagtactacagtgaggcagctaaagtggaaacctggctgtcgggtcagaag
ctccaacttgccagtgaagaaaaaggcacggatgagtcgagcactctgcagctgctgaag
gcccacgtggctctggagcaaacggtggaaacgtacgccgagacagttggcatgttatcc
cagcaatgccagcacctgctggaaatgggtcacccagaaagtgagcagctcaccaagcag
cagtcacacatagaccggctgtatgtgtccctcaaggacatggtggagcacaggaagacc
aagctggagcagcagtactggctctatcagctcaacaaggaggtggaggagttggagaag
tggatcacggagcgcgagactgtggccagttccaccgagctgggtcaggaccttgaggat
gtcacggtgcttcaagagaggttcacaaagtttgcctcagagaccaacaacgttggccag
caacgtatggagcaggtgaacaaaatggtgaacgagatgatcgactgcggccacaccgac
gcggccaccatcgccgagtggaaggacggcctgaatgagtcgtgggctgacctcctggag
ctgatggagactcgcaggcagatgctggcggcgtcacaccagctgcacaggttcttcacc
gactgcaaagaggtcttggctcagatcgcagggaagatgaagcagctgccagaggtgaga
gcgtgccaggccaacatcaccaatccagccaccctgcagagactcatgcactcctttgag
catgcccttcaactgctcgttgcacaggtgaggcagctgcaggagaacgctgcccagctg
aggaccatctacgctggcgagaaggccgaggccatcatggtcaaagagcaggaggtgatg
gaggcgtggaaagcgctgctgagctcctgcgagtccagtcgcatccaggttacttcagtg
accgacaaggtgcagttcttctcggtggtgcgtgaaaacctgatgtggatggaaggcatc
atgggccagataggctgggatgagccaagggatttgacagctctggaggtgatgatgagg
caacatcaagagatgaaagccaaaatagatggccgcaacaagaccatacagcaatgtgca
gatctgggcaagatcctgattgctgcaggaaaccctgcatccgaagagattaaagagaag
ctggacagccttctgtctaagcagaaggatctggtcgaaaaatgggacaaacaccaggaa
aggttgcaacgcaagcaggaacagttccagtttgcccaggagacagtcaaggcagaggcc
tggctgaaagccaaggagccactgatcacctccaaggagccagaaggagggggggcccgg
gcccaaacagacgaggcagagcagctcatccttcgccacgaggccttccgcaaggctgcc
gtaacctggaaagaacgtttcagctccctccgtcagctttccgcagctgagaagaaaaaa
gaggaggagaagaaaacaaccccactctccagtcgaaggatgttcccattatcttgtttg
actccaagcgttgcctcaaccagtgctacctcacctttcttgaggcagacaataaagggg
catatagaaaacaaaccatcacagacctgtctggatctgggtgccacccctgcttcccag
agattgtcctcagcccttgccagctacaatccagttataaatggatcgggctaccacgga
ctggaacagcaaagcagtggaaagttaatgagctcctcataccttgggatgaaccaccag
gcggctggaggtggaagtgactctggttactcagcgttgacctctcagagtggtggagca
gatacttcgacttaccttgggataaaccatcaaactgttggtagtgcagaaagttctggg
tactttggactaacttctgggtgtgtggggaatatgcaaaaccatctaagtagtggcaga
ttaggaagttcgggtaacatagcgcaacagacaagcagtggtggtttgggaaatcctagc
tttctccctcaacagaatatgggcagttcgggatatttggcacaacagcctaatattggg
agttctgggtatttggcacagcagtgtaacatggggagttctgggtatttggcacaacag
tctaacatgggaagctctgggtatttggcacaacagcctaatatggggagttctggttac
ctggcacaacagcctaatacagggagttctgggtatttggcacaacagcctaatatggga
gttctgggtatctggcacaacagcctaatacggggagttctgggtatctggcacaacagc
ctaatacggggagttctgggtatctggcacaacagcctaatatgggaagttctgggtatt
tggcacagcagcctaacatggggagttctggatacctag
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