Solea senegalensis (Senegalese sole): 122779955
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Entry
122779955 CDS
T07721
Symbol
irf1b
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 1b
KO
K09444
interferon regulatory factor 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
122779955 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122779955 (irf1b)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
122779955 (irf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
122779955
NCBI-ProteinID:
XP_043898606
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All DBs
Position
LG13:20446801..20450280
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AA seq
322 aa
AA seq
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MPVSRMRMRPWLEKMIESNAVSGLSWVDKDKTMFSIPWKHAARHGWEMDKDACLFKLWAI
HTGKYTVGQTCDPKTWKANFRCALNSLPDIEEEKNKSVNKGHQAMRIFRMLPATPKSSDK
RRKLKEQKLRKKTSAIKMEEDTDYSDTQSPSGDSLSEETTQENTVDSTVHTEQEELLFFP
SSEVPTEIVDDGPGSFSNSFYNRFQVSPDHITDDVDDVIQICQQLEKDLHWGSSSNEGMG
FLHNEPDTSPGSQWSDSSSVDELDEFPQYTTLCSNFINPTDDIWACFQDQEPPCSEQGTG
QCLETFETLGSSFLTTVLHSSL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgtcaaggatgaggatgaggccgtggctggagaagatgatcgagtccaacgcc
gtctcgggtctgtcttgggtggacaaggataagaccatgttctcaatcccctggaagcat
gcagcacgacacggctgggagatggacaaggacgcctgtctcttcaaactgtgggccatt
cacacagggaaatacaccgtgggccagacctgtgacccaaagacatggaaagccaacttc
cgctgtgccctgaactcgctgcccgacatcgaggaggagaaaaacaagagcgtcaacaaa
ggccaccaggccatgcgtatcttcaggatgctgccggccacgccgaaatccagcgataaa
cggcgcaaactaaaggaacagaagttacgcaagaagacttctgcgatcaagatggaggaa
gacacagactacagtgacacgcagtcaccgtcgggcgattcgctctcagaggagaccaca
caggaaaacacagtcgacagcactgtacacacagagcaggaagaattactgttttttcct
tcttctgaagtccccacggagatcgtcgatgacgggcccgggagcttctcaaacagcttt
tataacagattccaagtttcaccagatcacattaccgacgacgtcgatgacgtgattcag
atttgccagcaactggagaaagacctacactggggctcaagcagtaatgaaggcatggga
ttcctgcacaatgaaccggacacaagtccggggagccagtggagtgactcttcctcagtc
gacgaactggatgaattcccacagtacacaaccctgtgctcaaacttcataaaccccaca
gacgacatctgggcatgcttccaggatcaggaacccccatgttctgagcagggaacagga
caatgcttagagacttttgagacattaggaagctccttcctgaccaccgtgctccattcc
agtctgtaa
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integrated database retrieval system
