Solea senegalensis (Senegalese sole): 122779994
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Entry
122779994 CDS
T07721
Symbol
cnot8
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122779994 (cnot8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122779994 (cnot8)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122779994 (cnot8)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122779994 (cnot8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
122779994
NCBI-ProteinID:
XP_043898680
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All DBs
Position
LG13:complement(18169924..18173433)
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AA seq
286 aa
AA seq
DB search
MPAALTDSSQIICEVWASNVENEMRKIRQIIQSYNFIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLTFMNEDGDYPPTGTTTWQFNFKFNLTEDMYSQDSIDLLQNS
GLQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDARLPEEEH
DFFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFF
RMKELFFEDNIDDAKYCGRLYGLGSGSTQPQNGVSGSSQEETNNKH
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgcactgaccgactcgagtcagatcatctgcgaggtgtgggcgagtaacgtg
gaaaacgagatgaggaagatacgccagatcatccagagctacaacttcatcgccatggac
acagagttccccggcgtggtggtccggcccatcggcgagttccgcagcacggtggattat
cagtaccagctgctgcgatgtaatgtggacctgctgaagataatccagctcggactgacc
ttcatgaacgaggacggagattatccacccaccgggaccacgacctggcagttcaacttc
aagttcaacctcactgaggacatgtactcgcaggattccatagacctgctgcagaactca
ggactgcagtttaagaaacatgaagaagaaggaatcgacacgctttacttcgctgagctg
ctcatgacgtcgggtctggttctgtgtgagaacgtcaagtggctctccttccacagtggc
tacgactttggttacctggtgaagctgctgacggacgcgcggctgccggaagaggaacac
gacttcttccagatcctcaacctcttctttccggccatctacgacgtcaagtacttgatg
aagagctgcaagaacctgaagggcgggctgcaggaagtggccgatcagctggagctgaag
aggatcgggcgacagcatcaggccggctctgactctctgctcactgggatggcgttcttc
aggatgaaggagcttttttttgaagacaacatcgacgacgctaagtattgtgggagattg
tacggcctcggctcgggctccacgcaaccgcagaatggcgtctccggttccagtcaagag
gaaacaaataacaagcactga
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