Solea senegalensis (Senegalese sole): 122780016
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Entry
122780016 CDS
T07721
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122780016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122780016
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122780016
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122780016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf_RING_Vps8_fungal
PA
Motif
Other DBs
NCBI-GeneID:
122780016
NCBI-ProteinID:
XP_043898704
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All DBs
Position
LG13:13478035..13562489
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AA seq
825 aa
AA seq
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MTVPLWRLAGLWPWLLMAALQQQVVLAQPGLESERPALRALIKVTLLKNEPTGKPITLEG
VFVGGSAGYAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEHRVPRCLPLLDKARMALD
KGAQAVIFDVSDDANAAAELRETDALPRPVVLVEAEDAEELMGLVNKNEEAKVRIEIMME
QSKWPHYDVGILLTVFLAILTIVLIFAFRYKCKPNRTWDSVHQQTVRAISRLETKTYISQ
GCSGSQRHRGAWGSASSSNSTPVCAICLDEFQDGQHLRVISCAHEFHKDCVDPWLLQHRT
CPLCMHNIMGEDKHSYRTERQSQRNRLQQSPEQSQGFLHPQPYSSPHNHPFPQHAIPFSM
RPHYPRGPSGPYPSLGHYSGSSPMDAQTLRFLTSRPLGSGCGYRLPAEGPARSHRIGGNC
RTSTHHYTPRRSCHNYRSSCPTQRSASCSRLHHTASVTAQTRGAAAHSRQDEGSCSGGSY
HTERSGYLADGPASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVY
YGPGSGRGPRRNSLEAGTQVRPRSLDSVVNKVGCPEEQPQTVFSHIHYHRHRHHHYEDGE
HSQGPSRGSDEEQGASAATAAVVLDKDSPVCPPKHSPCQCPIPDPTDRHSPGKAECQDHD
TSSPSGPPVLMSPIPLQLQPHCCLQGHSHPPAPLGRVAACVLDGPSVRFHQSLDLPDDRS
IHIHYGQGPGFCCSPPDLHPALLPVPLILDSGGMEEWPCCTGAHVVWQKRVQQARSEPQL
LAPGTSMDRPACRFHQGPAADCNTDICLYCQTLHQNQGSEEESGV
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtccccctgtggcgcctggccgggctctggccgtggctgctcatggcggccctg
cagcagcaggtggtgctggctcagccgggcctggagtccgagcggccggccctgcgagcg
ctcatcaaggtgacactgctgaagaacgagcccacggggaagcccatcactctggagggg
gtgttcgttggaggaagtgccggctatgcggagggaaagctaatgcagtatcaccctttg
tctctgtgcaacacgagcgaggatgaacggcaggagagtgacttcatcaccattgtcaag
ctggagcaccgagttccccgatgtctgccgctgctcgataaggctcgcatggccctggat
aagggagctcaggctgttatctttgatgtcagtgatgatgccaatgctgctgctgagctg
cgggaaacagacgcccttcctcgtccagtcgtgttagtagaggctgaagatgctgaggag
ctgatgggtttggtcaacaagaatgaggaggccaaagttcgcattgagatcatgatggag
cagtcgaaatggccacattacgatgtgggtatcctgctcaccgtcttcctagctattttg
accatcgtcctcatctttgccttccgctacaagtgcaagcccaacaggacgtgggactct
gttcatcagcagaccgtgcgggccattagtagactggagaccaaaacctacatctctcag
ggctgctctggctcacagcgacaccgcggggcctgggggtcagccagcagctccaactca
acccccgtctgtgctatttgccttgatgagttccaggacgggcagcatttgagggtcatc
tcctgcgctcatgagttccataaggactgtgttgacccctggctgctgcagcaccgcacc
tgtcccctctgcatgcacaacatcatgggtgaggacaagcatagttacaggacagagcga
cagtcacagaggaataggctccagcagagtccagagcagagccaaggcttcctgcaccct
cagccttacagcagcccacataaccaccccttccctcagcatgcgatccccttctctatg
aggccccactatcctcgtggaccctccggaccatatccttctctgggccactacagcggc
tcttcccccatggacgcacaaacactgcgattcctcaccagcaggccgcttggctctggc
tgtgggtaccgccttcccgcagaaggtcccgcgaggtctcacaggattggaggtaactgc
aggacgtccactcaccactacacgcctcgccgctcctgccacaattatcgttcatcctgc
ccgacacagcgcagtgcgtcctgttcgagactgcaccacaccgcctctgtcacggcacag
acccggggagcagccgctcacagccggcaggacgagggcagctgctcaggtggcagctac
cacacagaacgcagtggatatttagccgatgggccagcaagtgattccagctcggggccc
tgccatggctcctccagcgactcagttctcaactgtactgatgtgtccttgcagggagtt
tatggcagctggtccaccttccgtagttccctgagtagtgactacgatccgtttgtgtat
tatgggccaggttctggacgggggccccggaggaacagtctggaggctggtactcaggtc
cggcctaggtctctggattctgtggtgaacaaagtgggctgccctgaagaacagccacag
actgtgttcagccacatccactaccaccgtcacagacaccaccactatgaggacggggag
cacagtcagggaccaagcagaggctcggacgaggagcagggagcctctgctgccactgct
gctgtggttctggataaagactcacctgtgtgcccccctaaacacagtccctgccagtgc
ccgatacctgaccctacagatcggcacagcccgggaaaggcagaatgccaggaccatgac
accagcagtccttcaggacctcctgtcctgatgtccccgatccccttacagctccagccc
cactgctgtcttcagggacacagtcaccctcccgctcctctggggcgagtggccgcctgt
gtgctcgatggcccttctgttcgcttccaccagagcctggatctgccggacgaccgtagc
atccatattcactatggtcagggcccaggcttctgctgctccccccctgatctgcacccg
gctctgctccctgtgcccctcattctagactctggaggcatggaggagtggccttgttgc
accggggcccatgttgtgtggcaaaagcgggtgcagcaggctcgctcagagcctcagctg
ctggctcctgggacttctatggacaggccagcgtgcaggttccatcagggacctgctgct
gactgcaacacagacatttgtttatactgccaaacattacaccaaaatcagggatcagaa
gaggagtctggtgtgtga
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