Solea senegalensis (Senegalese sole): 122780146
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Entry
122780146 CDS
T07721
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122780146
Ion channels [BR:
ssen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122780146
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
122780146
NCBI-ProteinID:
XP_043898896
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All DBs
Position
LG13:complement(3205280..3233080)
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AA seq
940 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRAESELSPLEKAYLGAVEKGDYASVKHALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFGVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSVPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMVLNYRDDTNILEEESNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFFTCVFIGLLFPVFALSYLIAPKSRYGLFIR
KPFIKFICHTSSYLTFLFLLLLASQHIVTTEQDRQDRQGPAPTTVEWMILPWVLGFIWAE
IKQMWDGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTRYSGSKPRNQWEMWHPTLVA
EAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETKASDEKGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDADHQFTE
FVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATLP
APFNIIPSPKSFLYLMCWIKRQVCKRTNSKRPESFGSLGRRAAENLRVNHQYQEVLRNLV
KRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVMGMMKTGKPALQAAKASGSAVDSS
LALLNPPCPQSSQAKSKLNRFKITASILKLGSSAASPRPPEASNGLPNGLLSLVPDKSPS
EKSNQRRSFPKDIADFVPLFQKHHWSGSDAASAEEDISRRMYSLSEEAAESGGSDTDEQD
KQAVAAAEGQKRLEMGEEAAEMEEMKVLNSNCCLEEKEEQ
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctttactatcggcgcactgacagctcctcgtatcgggaccgcatcccacta
agaattgtgcgggccgagtcggagctgtcgcctttggagaaagcctatctcggagctgtg
gagaagggcgactatgccagtgtcaaacacgccctggaggaagcggagatctacttcaag
atcaacatcaactgcatcgaccctctgggccgcaccgctctgctgattgccatagagaac
gagaaccttgaaattatagaactcctgctgagcttcggcgtctatgtcggcgatgccctg
ctgcacgctatccgcaaggaagtggtgggagctgtggagctgctgctaaaccacaagaaa
cccagcggtggaatgcaggttcctccaatcttattggacaagcagttctctgacttcacc
cctgacatcactcccatcattcttgctgcacacaccaacaactatgaaattatcaagctt
ctggtgcagaaaggtgtttctgtgccgcagccgcatgaggtgcgctgcaactgtgtggag
tgcgtgtccagctcggacgtggacagtctgcggcactcgcgctctcgcctcaacatctac
aaggcgctgtcgagtccctcgctgatcgcgctctccagcgaggacccgttcctcaccgcg
ttcaggctcagctgggagctgcaggagctcagcaaggtggagaatgagtttaaatcagag
tacgaggagctgtcacagcagtgcaagcagttcgccaaggacctcctggaccagacgcgc
agctccagagagctggagatggtcctcaactacagagacgacaccaacatcttggaggag
gaaagcaacaatgacctggcgagactcaaactggctatcaagtaccaccaaaaagagttt
gttgctcagccaaactgccagcagctgttggcgtcccggtggtatgacgagttccccggc
tggagacggcgacactgggcggggaagttctttacctgtgtcttcatcggcctcctcttc
cccgtgtttgccctcagctacctcatcgccccgaagagccgctacggcctcttcatccgt
aagcccttcatcaagttcatctgccacacgtcgtcatacctgacgttcctgttcctgctg
ctcctcgcctcccagcacatcgtcaccacggagcaggaccggcaggacaggcagggccct
gcaccaacgacagtggagtggatgatcctgccctgggttctgggattcatctgggcagaa
atcaagcaaatgtgggacggtggtttccaagactatgtccatgactggtggaacctcatg
gactttgtcatgaattcgttatacctggccaccatctccctcaagattgtagcctacaca
aggtacagcggcagtaaaccaagaaaccagtgggaaatgtggcacccaacgctggtcgct
gaggcagtgttcgccatcgctaacattttcagttccctgcgtctgatctcgctcttcacc
gccaactctcatctggggccactgcagatctctcttgggcgaatgctgctggacatcctc
aagttcctcttcatctactgtttggtcttgctcgcctttgctaatgggctgaaccagttg
tacttctactatgagaccaaggcttcagatgagaaggggaaatgcaagggcatccgctgt
gtggagcagaataacgctttctcgacgttattcgagaccctgcagtctctcttctggtca
atcttcggcctgatcagcctgtacgtgaccaacgtggacgcggaccaccagttcacggag
ttcgtcggcgccaccatgttcggcacctacaacatcatctcgctggtcgtcctcctgaac
atgctcatcgccatgatgaacaactcctaccagcacatcgcagaccatgccgacatcgag
tggaaatttgccagaacgaagctgtggatgagctactttgaggagggagccactctgccg
gccccgttcaacatcatccccagccccaaatcattcttgtacctcatgtgttggattaag
aggcaagtgtgcaagaggacgaattccaagcggccggaaagcttcggatctctcgggagg
cgagcggcagagaatctgagagtaaaccatcagtatcaggaggtgctgaggaacttggtg
aagcgttacgtggctgccatgatcagagatgccaagacagaggaagggctgactgaagag
aacttcaaggagctgaaacaagatatctccagttttcgttatgaggtgatgggcatgatg
aagacggggaagcccgcgctacaggcggcaaaggccagcggcagcgcggtggactccagt
cttgctctcctgaatcccccttgtcctcagagcagccaggcaaaaagcaaactcaacaga
ttcaagatcaccgcctccatcctgaagctgggcagttctgcagcttcacccagaccaccc
gaggcctccaacggcctccccaatggactcctgtccctggtcccagacaagagccccagc
gaaaagtcaaaccagaggagaagcttccccaaagatatcgcagactttgttccactgttc
cagaaacatcactggagtggcagtgacgccgcatcagctgaggaagacatttccagaagg
atgtactctttgtcagaggaagcagcggagtctggaggctcagacacggacgagcaggac
aaacaggccgtggctgcagccgagggtcagaaaaggcttgaaatgggagaagaggctgcg
gagatggaggagatgaaagtcttaaatagcaactgctgcttggaggaaaaggaggaacag
taa
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