Solea senegalensis (Senegalese sole): 122780254
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Entry
122780254 CDS
T07721
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122780254 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssen04040
]
122780254 (chrne)
Ion channels [BR:
ssen04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
122780254 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
122780254
NCBI-ProteinID:
XP_043899061
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Position
LG13:1644245..1652028
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AA seq
517 aa
AA seq
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MMAAERFWIFSGVVIILGGLIVHVRCNEESELISKLFKNYNKNIRPVVLPVDKVEVQIKL
TLTNLISLNEKEETLTTNVWIEIQWSDPRLAWNTSDFYGIDIIRVPCNTVWLPDIVLENN
IDGNFGVAYYANVLIDSSGWMYWLPPAIYRSTCAIEITYFPFDYQNCTLAFRSQTYSAKE
VDLILAVENDKTVEWVDIDPEAFTENGEWAIVHRPARKMINKRYSPDDLEYQEILFNLII
QRKPLFYIINVILPCSLISSLVVLAYFLPAQAGGQKLTVAISVLLAQTVFLFLIAQKVPE
TSLSVPLIGKYLIFVMCVTTLIATNQIVVLNFSLRSPSTHTMSHTIKHVFLEMVPRFLGM
SPLVDDSEVTAEVNGVRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLTRSIVDN
VDVSSTANLYKSLAQAAPEIKQCVDACNFIAESTRHQNSIGSEIESWVLIGKMIDKVCFW
AAMLLFIIGTVGIFLTGHFNQVPAFPFPGLTKQFAPT
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagcagaaaggttttggatattttctggagttgtaattattcttgggggtttg
attgttcacgtgcggtgtaatgaggagagtgagctcatcagcaagttgttcaagaactac
aacaagaatatccgccccgtggttctccctgtcgacaaggtggaggtccagatcaagctg
accctcactaacctcatctctctgaacgaaaaggaggagacgcttacaaccaacgtgtgg
attgaaattcaatggtctgatcctcgcctcgcgtggaacacttctgacttctatggcatc
gatatcattcgtgtcccgtgtaacacggtttggcttccagatattgtccttgagaacaac
atcgatggaaacttcggtgtggcctactatgctaatgtgttgatcgacagctctggctgg
atgtactggctacctcctgctatctatcgcagcacatgtgccattgagatcacctacttc
ccgttcgattatcagaactgcacgttagcgttcagatcccagacgtacagtgccaaagaa
gtggacctcatcttggctgttgaaaatgacaagactgtcgagtgggtggacatcgaccct
gaggcgttcacagagaacggcgagtgggccatcgtccatcgtccggccaggaagatgatc
aacaagcggtattccccagacgacttggagtaccaggagatcctgtttaatctgattatc
caaaggaagcccctcttctacatcatcaacgtcatcttgccctgctccctcatctcctca
ctggtcgtactggcctacttcctacctgcacaagctggaggacagaagttgactgttgcc
atctctgtgctgctggctcagactgtcttcctcttccttattgcccagaaagttcctgaa
acgtctctttctgttcctctcatcggcaagtacctcatctttgtcatgtgtgtcacgact
ctcattgccactaatcagattgtggtgctgaacttctccctgcgcagccccagcactcac
accatgtcgcacaccatcaaacatgtgttcctcgagatggtgcctcgtttcctgggcatg
tccccactggtggacgacagtgaggtgacagcggaggtcaacggagtgcgggagcggcgg
cgcagctccttcggcctcatgcagagggcagaggaatatgtactcaaacaacctcgcagt
gaaatgatgtttgacaagcagagggagaggcacggcctcacgcgatccattgtggataat
gtagatgtcagcagcacagcgaacctttataagagtttggcccaagctgcgcctgagatc
aagcaatgtgtggatgcgtgcaacttcatagctgagagcacgagacatcaaaatagcatt
ggatcagaaattgaaagctgggtactgatcgggaagatgattgacaaggtgtgtttctgg
gctgccatgctcctcttcatcattggcacagttgggatcttcctaacaggacacttcaac
caggtgccagcgtttccttttcctggtctgactaaacaatttgctccgacatag
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