Solea senegalensis (Senegalese sole): 122780328
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Entry
122780328 CDS
T07721
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssen03036
]
122780328
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122780328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
AAA_22
TniB
NOA36
YL1
Motif
Other DBs
NCBI-GeneID:
122780328
NCBI-ProteinID:
XP_043899135
LinkDB
All DBs
Position
LG14:complement(25262364..25282396)
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AA seq
684 aa
AA seq
DB search
MSDILSRIKQSVVEKRKKRKKTPVNQGELHKWGLTGIQLRQYQVDGVRWLTQCLEKQQGC
ILGDEMGLGKTCQTISLLVYMCGARKDKGPFLVLSPLSVLENWRKELDSFAPSLTVLCYK
GDKEKRAEIQRERSMQDFHVLLTTYELCLKDTSFLKRWKWKVLVVDEAHRLKNQKSLLHK
TLTQLCSEFRVLLTGTPIQNNLQELYSLLTFIQPSVFTVDELNTFVQYYADVRKNPALAA
ELQKVLEPFLLRRVKSEVALDLPRKVELVVYHGMSALQKKYYKAVLMKNSEAFGNEQRNK
TRLLNILVNLRKCVNHPYLFDGVEPEPFQMGEHLVEASGKLCLLDSILTLLHKEGHRVLL
FSQMTRMLDIIQDYLEYKNYSYERLDGSVRGEERNLAVKNFSSRDVFIFLLSTKAGGVGL
NLTAADTVIFVDTDFNPQNDLQAAARCHRIGQSRPVKVIRLLARNTVEEMMYSRAASKLH
LTNTVIEEGRFSLLNEPTTSTAQGMQLSEILKFGVDKLLSSEESSVQDVKLEKILGLSRN
GQWVSDEDVSSHSEEEDEDEEEQEEEEQEEEEEEEEESDRYHMYYFEGKDYRQCTSSKDL
NAFDRLVEEHQAAIQTQAGEGRALRHKAGGTPSFAAGIPTKKRRTFTEAELELRRQKREE
AAAKRAKTQEDTKKRQQEQKHKNK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacattttgtccaggataaaacagagcgtggtggagaagagaaagaagagaaag
aaaacgcccgttaatcagggcgagctacacaagtggggtttgacagggattcagctgaga
cagtaccaggtggacggtgtccggtggttgacccagtgtctggagaagcagcaggggtgc
attctgggagatgagatgggtttaggaaaaacctgtcagacgatctctctgctggtctac
atgtgtggcgctcgtaaggacaaaggtccatttttagtcctgagtccactctctgtcctg
gagaactggaggaaagagctggacagctttgctccgtcactgactgtcctgtgttataaa
ggagacaaagagaaacgagctgagattcagagagaaagatcgatgcaggattttcacgtt
cttctcaccacgtacgagctctgcctcaaagacacctcattcctgaaacggtggaagtgg
aaggtgctggtcgtggacgaggctcatcgtctgaagaatcaaaagtcactgttacataaa
actctgacacagttgtgttcagagtttagggtgctgctgacaggaacaccgatccagaac
aatcttcaggaactctactctctgctgactttcatccagcccagcgtcttcactgtggac
gagctgaacacgtttgtgcagtattacgcagacgtacggaagaatcctgctcttgctgct
gaacttcagaaggtcttggagccgtttcttctgcgcagagtgaaatctgaggtggctcta
gatttgcccaggaaggtggagctggtggtttatcacggcatgtcggctctgcagaagaaa
tactacaaagctgttctgatgaagaactctgaggcgtttggaaacgagcagcggaacaag
actcgactcttgaacatcctggtgaacctgaggaaatgtgtcaaccacccgtatctgttt
gacggtgtggaaccagagccgtttcagatgggagaacatctggttgaagccagtgggaag
ctctgtctcttggacagcattctgactctgctgcacaaagagggtcatcgtgtcctgctg
ttctctcagatgaccaggatgttggatattatccaggattatttggagtacaaaaattac
agctacgagcgtctggacggttcagtccgaggagaagaacggaatctggccgtgaagaac
ttcagcagcagagacgtcttcatctttctgctcagcactaaagcaggtggggtggggctg
aacctcacggccgctgacaccgtcattttcgtggacactgacttcaaccctcagaacgac
ctgcaggccgcagctcgctgccatcgcattggtcagagcagaccggtgaaagtgatccgt
ctgctggccagaaacactgtggaagagatgatgtactctcgcgccgcatccaaactccac
ctcaccaacacggtcatcgaagagggacgcttctctttactgaatgaacctaccaccagt
acagcacagggaatgcagctcagcgagatcttgaagttcggggtagataagctcctgtca
tcagaagagagctccgtgcaggatgtgaaactggagaagatcctcggcctgtcacgcaac
ggacagtgggtgagtgacgaggatgtcagctcacacagtgaagaagaggatgaggacgaa
gaagagcaggaggaggaggagcaggaggaggaggaggaggaagaggaggaatcagacaga
tatcacatgtactactttgagggcaaagactacaggcagtgcaccagctctaaagacctc
aatgccttcgatcgcctggtggaggagcatcaggctgcgattcagacgcaggcgggagag
ggacgagcactgcgacacaaagctggaggaacgccgtcgttcgctgccgggattccaaca
aagaagaggagaactttcaccgaggccgagctggagctgaggcgtcagaagagagaagag
gctgcagccaagagagccaagactcaggaggacacaaagaagagacagcaagagcaaaaa
cacaagaacaagtaa
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