Solea senegalensis (Senegalese sole): 122780388
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Entry
122780388 CDS
T07721
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122780388 (lingo3a)
Membrane trafficking [BR:
ssen04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122780388 (lingo3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_9
LRRNT
V-set
LRR_6
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
122780388
NCBI-ProteinID:
XP_043899227
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Position
LG14:5683170..5717322
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AA seq
612 aa
AA seq
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MAMGSSLSQDVGWCLPFLFLLLMISVSPAHSQGCPQRCDCIAKLKTVSCYGKRLSALPDG
IPLDTKILDLSGNKLRWVEHGDLLPYTRLEKLDLSDNMINVLEPNAFSNLQNLLSLSLRG
NQLKLIPMGAFSHLSNLTSLDLSGNKIVILLDFTFQDLKNLKNLQVGDNDLVYISNKAFL
GLVGLKELTIEKCNLTSVSSQSLSYLHNLVTLRLRYLSISALEDQNFRKLGNLRGLEINH
WPFLEYISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSYNPISVLESWALR
DLVRLKELHMVNTNLAVVQPYALGGLRQIRVLNLSSNSLVTLEEGAFQSVNTLETLRLDG
NPLACDCRLLWILQRRKTLNFDGASPMCMMPVEVQGRALNAFTDSALFDHFTCQKPKIRN
RKLQQVSAREGQVVSFICRAEGEPTPVVFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQ
VIDSGTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVLLKF
TLDLKTILISTAMGCIMFLGVVLFCFILLFVWSRGKGQHKNNFSVEYSFRKVDGPAASGG
QGGARKFNMKMI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggccatggggtcgagcctgagccaggatgtaggctggtgcctgcctttcctgttcttg
ctactgatgatctcagtgtctcctgcccacagccaaggatgtccccagcgctgtgattgc
attgcgaagctcaagaccgtgtcctgttacggtaagcgtctgtctgcattgccagatggc
atccctctggacaccaagatcctggaccttagtgggaacaaactccgctgggtagaacat
ggtgacttgctcccgtatacccgtcttgaaaagctggacttgagcgacaacatgattaat
gtcctggaaccaaatgctttttctaatctccagaacctgctgtcactttctctgaggggg
aaccagttgaaactgattccaatgggggctttctcacatctctccaacctcacttcattg
gacctcagcggcaataaaattgtgattcttttggactttacgttccaggacctgaaaaat
ctcaaaaacctgcaagttggagacaatgatctagtttatatctccaataaggcctttctt
ggtctcgtggggctgaaggagctgaccattgagaagtgcaacttgacgtctgtgtccagc
cagtcgttatcatacctgcataacctggtgactctgcggctccgctacctcagcatctct
gcattagaagaccagaatttccggaagctgggaaacctaaggggtcttgagatcaatcac
tggccctttttggagtacatatcccctcacagcctgcagggccttaacttgtcctggctg
tctatcacgcacaccaacatcacctcagttccgacatctgccctacgcagcctggcccac
ctcaccagtcttaacctctcctacaatcctatctcagtgttggagtcctgggcgctgcgg
gaccttgttagactgaaggagctgcacatggttaacactaacctggcagttgtgcagcct
tatgcgctggggggtctaaggcaaatccgggttcttaacctgtcctctaacagcctggtg
actctagaagaaggagcttttcagtccgtcaacactctggagacgctgcgtttggatgga
aaccctctggcgtgcgactgccgcttgctctggatacttcagcgcagaaagactcttaat
tttgacggcgcctccccaatgtgtatgatgcccgttgaggtgcaggggcgggctcttaat
gctttcactgactcagctctctttgatcacttcacttgccagaagcccaaaatccgcaac
aggaaactgcaacaggtatctgcccgtgaaggacaggttgtgtcgttcatttgcagagcg
gaaggtgagccaacacctgtggtattctggatctctcctcaacgccgccgcatcactaca
aagagcagtggccgcttaactgtactaccagaaggcacattagaaataagatatgcgcag
gtaatagatagtgggacttacatctgcattgccagcaatgctggtgggaatgacacctac
tttgccacacttacagtgagtgggctgccactagatgcggccctcatggccaaccgcact
tactatgctggggatcttaatgacacaaatctaaatgataccagggtcttattgaagttt
actctggaccttaagaccatcctcatatccacagccatgggctgcatcatgttcctgggt
gtggtcctgttctgtttcatcttgctgtttgtgtggagtcgagggaaagggcagcacaag
aacaatttctcagtggaatattccttcagaaaggtggatgggcctgcagccagcggagga
cagggtggagcacgcaaattcaacatgaaaatgatttga
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