Solea senegalensis (Senegalese sole): 122780564
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Entry
122780564 CDS
T07721
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122780564 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssen04131
]
122780564 (rubcn)
Membrane trafficking [BR:
ssen04131
]
Autophagy
Other autophagy associated proteins
Others
122780564 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
LRRFIP
RecO_C
CMD
Motif
Other DBs
NCBI-GeneID:
122780564
NCBI-ProteinID:
XP_043899551
LinkDB
All DBs
Position
LG14:10216729..10235077
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AA seq
966 aa
AA seq
DB search
MEITAEEEAEERRKEHWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNNILSHGL
KNEQVYYKQRDYWPFVWCVRYISPHLASHVEQFSHLEPVLSSGMQSSGESYKAERWLLHS
LQVHMLSAQLRPLLRHLGHTRKFYNDDAFLLSEPHVTAMFQCLEAVEQNNPKLLAQVDTV
GLSPLKSPPCLGLLKSQSLCVLPGAGGAWKSRDLAPRGESLNRRLTTSNCSLREAVLSSQ
KSSQNTNDTTSPTNSLGAPWLCVSRPGESERSVTPPPGPVSVPCITLTESPKPTSPQPEM
GDSCDGEYDDGPEYLAIGNLAQRSRRDSQSSTHSSEQGETQDQYHQRPLQAPPPPRRSSY
SELQRGPGRGSRGHTRSFSDTGVNQKLRNGGGHRKITIIIEDPVAELAGDDCCMKDYSPF
STQCSDSKTPSSLYMESYGSQYSSVPDGMFRKPSEGQSLISYLSEQDFGSCADLEKENAH
FSISESLIAAIELMKYNLRLQEEEGEEEVDSDSEIQQLKQKIRLRRQQIRRSRLPPCTTS
QHIFHSTDSGGSRRSSQDSYQGLSDSGSAEEVEECELRDGCEGQSLLAVSQNGLSLSLAS
LFSDADIKRSVSSGSRSFLSSESVTPSFLQSNSAESVAMGLLRQFEGMQLPAASELDWLV
PEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAPPRPQIIFNIHPAPKRKI
IVAKQNYRCAGCGTRIDPDYIKRLRYCEYIGRYFCQCCHENAQAVVPGRVLRKWDFSKYY
VSNFARDLLSKIAGDPLFNPSDINSGLYKKVKSLEAVRVLRVKLFHMKNLFKTCRFAKEV
LDQFDSLPGHLTEDLHLFSLADLTAVRNGDLAPRMKELLKLGTTHVDGCVLCQAKGFVCE
FCGNDKDIIFPFQLNKCQRCEDCHACYHSSCFRTGKDCPRCRRLNERRERMARKNMEEQE
DEGGGT
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggagattacggcggaggaagaggcggaggagcgcaggaaggagcactggaaactgctg
tcaagtctgaagacgacagtagagggtcttgtgtccaccaacaaccccaatgtatggtca
cgctatggtggactgcagcgtcttcacaaggacatgaacaacatcctcagccatgggctg
aagaatgagcaggtatactacaagcagagagactactggccgtttgtgtggtgtgtacgc
tacatcagccctcaccttgcttcacatgtagaacagttcagtcaccttgagccggtattg
agcagtggtatgcagagttctggagaaagctacaaggcagagcgctggctgcttcacagc
ttacaggttcacatgctgtcggcacaactccgacctctactcaggcatttgggacataca
cgtaaattctataatgatgatgctttcctgctcagtgagcctcacgtgaccgccatgttt
cagtgtctggaagctgtggagcagaacaatcccaaattgcttgcccaagtagacacggtt
gggctgtcgcctctgaaaagtccaccatgtctgggtctgttgaagagccagagtctgtgt
gtgttgccaggggctggtggggcctggaagagccgtgacttggccccacgaggagaatct
ttgaatcgcagactcaccacctccaactgctctttacgagaagcagtcctttccagccag
aaatcctcccaaaacaccaacgacactacctctcctaccaacagcctgggagctccatgg
ttgtgtgtgtccaggcctggtgagagcgagcgaagtgtgaccccccctcctggccctgtc
tcagtcccatgtatcaccctgacagagtcccccaaacccacctcccctcagcctgaaatg
ggtgactcttgtgatggagagtatgatgatggtccagagtacctggctatcggtaacctg
gctcaacgcagtcgccgggactcccaaagctccacccatagtagtgagcagggcgagacc
caggaccaataccatcaacgtccgttgcaggccccacctccacccagacgatcatcttat
tcagaacttcagcgggggccgggccgtgggtccagaggacacacccgctccttttcggac
accggggtcaatcagaaactcaggaatggagggggacaccgaaaaatcaccataataata
gaagatccggtagcagaattggcaggtgacgactgctgcatgaaggactatagccccttc
tcaactcagtgcagtgattcaaaaactccaagttccctctacatggagtcttatggatcc
cagtacagcagtgttccagatgggatgttcaggaaaccgtcagagggccagagcctcatc
agctacctgtcagagcaggactttggcagctgtgctgaccttgaaaaggagaatgctcat
ttcagcatttctgagtcccttattgcagctatagagctgatgaagtacaacctgcggctt
caggaggaagagggtgaggaggaggtagacagtgactctgaaattcagcaactcaagcaa
aagatccgcctgcgcaggcaacagatccgccgtagccgcttgccgccttgcacaacctcc
cagcacatatttcactccactgacagtggaggctccaggaggagttctcaggactcttat
cagggcctgtctgactcaggctcagctgaggaggtggaggagtgtgaactaagagatggc
tgtgagggtcagtccctgctggcggtgtctcagaacggcctctccttatcactcgcctcg
ctcttctcagatgcagacataaagcgcagtgtgagctcaggcagcaggtcttttctcagc
tcagagtctgtcactccgtccttcctccagtctaactctgctgagtcagtagccatgggt
ttgctcaggcagtttgagggcatgcagcttcctgctgcttcggagctggactggctggtc
ccagaacacgatgctccacagaagctgctgcccatccctgactctctgccgatctcacct
gatgatggtgaacacgctgacatctacaagttaaggattcgggtccgaggcaacctcgag
tgggcaccgcctcgaccacagatcatcttcaacattcaccctgctccaaagaggaagata
attgtagctaaacagaactaccgctgtgctggctgtggcactcgcattgaccctgactac
attaagcgactgcgttactgtgaatacatcggccgttacttctgccagtgctgccatgaa
aatgcccaggcggtggttcccggccgggttttaaggaagtgggatttcagcaaatactat
gtcagcaactttgcccgtgacctactaagcaagattgctggagacccactgttcaacccc
agtgatattaacagcggactgtacaagaaggtcaaatctctggaggctgtacgggttttg
agggtgaagttgtttcacatgaagaatctcttcaagacctgtcgttttgctaaagaggtg
ctggaccagtttgatagcctgcctggtcacctgaccgaagaccttcacctcttctccctt
gctgacctcactgccgtgcgcaacggggatctggctcctcgaatgaaagagctgcttaaa
cttggtactacacatgtcgatggttgtgtgctgtgccaggcgaagggttttgtgtgcgag
ttctgcggaaatgacaaagacatcatcttccccttccagctgaacaagtgccagcgctgc
gaagactgtcacgcttgttaccatagcagctgcttccggacaggtaaagactgccctcga
tgtcggcggctgaacgaacgcagagagaggatggctcgcaaaaacatggaggaacaagag
gacgagggaggagggacgtag
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