Solea senegalensis (Senegalese sole): 122780611
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Entry
122780611 CDS
T07721
Name
(RefSeq) UV excision repair protein RAD23 homolog A-like
KO
K10839
UV excision repair protein RAD23
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03420
Nucleotide excision repair
ssen04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122780611
09124 Replication and repair
03420 Nucleotide excision repair
122780611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ssen03051
]
122780611
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122780611
Proteasome [BR:
ssen03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
122780611
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
122780611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
ubiquitin
XPC-binding
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
UBA_3
Dsc3_N
Ubiquitin_2
DUF1421
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
122780611
NCBI-ProteinID:
XP_043899624
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Position
LG14:complement(20609159..20622644)
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AA seq
471 aa
AA seq
DB search
MLTITLKTLQQQTFKIEIDPEVTVKTLKEKIEGDRGKDAFPAAGQKLIYAGKILNDDTPL
KEYKIDEKNFVVVMVTKPKAAPAPKEAPQPSPPPAAASAPASTSSTSPPASGPAQVASTP
TQAASVSEPAPQSVPLSEPPSSSSVPENTATDSAEAASASASAAAALDSKADSAPAVTPA
DAPAPAPEAVQPASATADTSTPAAQPEDTSEENSEDQPSITEPEQSSASSLVDELGLLEE
AASILVTGPAYENLVSEIMSMGYEQEQVVAALRASYNNPDRAVEYLLMGIPAEATDLPSQ
EPVRHSAPSNPPIPATQPPQPPPLPSTGGGGGSAPPTANPLEFLRNQPQFQQMRQIIQQN
PALLPALLQQLGRDNPQLLQQITQHQQQQFADANENTILAGCFTRKAQGEPVFRVNHTKP
HIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQTWDDE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccatcacgctgaagacgctgcagcagcagaccttcaagatagagatagacccc
gaagtgacggtgaaaaccctgaaggagaaaatagagggtgacagaggaaaagatgcgttt
cctgctgctggacagaaactcatctacgcaggtaaaatcttaaacgatgacactccgctc
aaagagtacaaaatagatgagaagaactttgtggttgtcatggtaaccaagccaaaagca
gcgcctgctccaaaagaggcccctcagccgtctcctccacccgctgcagcttcagcacca
gcctccacctcctccacctcaccaccagcctctggcccggcacaagtagcctcaacaccg
acacaagcggcgtccgtgtctgaacctgctccacagtcagtgcctctctctgaacccccg
tcctcgtcctcagtcccagaaaacacagcgacagattctgctgaagcagcatcagcatca
gcatccgcagcagcagctctggactcaaaggcagactcggctccagctgtgactccagct
gatgctccggctccagctcctgaagctgttcagccagcctcagccactgcagacacgtct
acacccgctgcacagccagaagacacttcggaggaaaactcagaggatcagccttcgatc
acggaaccagagcaatcatctgcctccagccttgttgatgaactgggactccttgaagaa
gcggcgtcaatactggtaacaggccccgcctatgagaacctggtgtctgagatcatgtcc
atgggttatgagcaggagcaggtcgtcgctgcgctcagagccagctacaacaacccggac
cgagcagtggagtatctgctcatggggattccagcagaagccactgatctcccatctcaa
gaaccagtgagacacagcgctccatccaaccccccgatccctgcgacacagccaccacaa
cctcctcctctgccctccactggtggtggaggaggctctgctccgcccacggcgaaccct
ctggagttcctgaggaaccagcctcagttccagcagatgagacagatcatccagcagaac
ccggcgcttctaccagcgctgctgcagcagctcggcagagacaacccacagctgctgcag
caaatcacgcagcaccagcagcagcagtttgcagatgcgaatgaaaacacaattttggca
gggtgctttacacggaaagcgcagggagagccggtgttcagggtcaaccacacaaaacca
catatccaagtcaccccacaggagaaggaggccatcgagaggttaaaagcactgggcttc
cctgaaggcttagtcatccaggcttactttgcctgcgagaagaatgaaaatctggccgca
aacttccttctacaacaaacgtgggacgacgagtag
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integrated database retrieval system
