Solea senegalensis (Senegalese sole): 122780616
Help
Entry
122780616 CDS
T07721
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssen03009
]
122780616 (ddx49)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122780616 (ddx49)
Ribosome biogenesis [BR:
ssen03009
]
Eukaryotic type
90S particles
Helicases
122780616 (ddx49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
P-loop_SecA
Laminin_B
Motif
Other DBs
NCBI-GeneID:
122780616
NCBI-ProteinID:
XP_043899630
LinkDB
All DBs
Position
LG14:14811660..14817264
Genome browser
AA seq
479 aa
AA seq
DB search
MGDFASLGLSDWLVKQCKQLGINKPTPVQENCMPAILEGRDCLGCAKTGSGKTAAFVLPV
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRILGKPLGLRDCIVVGGMDMVSQALELSNQ
PHVVVATPGRLADHIRSSNTFSMSKIQFLILDEADRLLEQGCTDFTKDLEVILGVIPAKR
QTLLFSATLTNTLQDLKNIAMNKPFFWESKSETRTVEELDQRYILTPEKVKDAYLVHLIQ
TITDEHDDWSVIIFTNTCKSCQILTMMLREFNFPTISLHSMMKQKQRFASLAKFKASVYK
ILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLV
HSIEEQIQAKLKEYPVEEKEVLKILTQVNVTRRECEIKLESTDFDEKKEINKRKQLILEG
KDPDLEAKRKAELEKIRSQKKKFKLKIQESIEKEKHGQLKKKLRKRKQMKKKKAAEATA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgggtgactttgcatcgctcggactctcagactggctggttaaacaatgtaaacagctg
ggaatcaacaaaccgactccagtacaggaaaactgcatgcctgctattttagaaggtcgg
gactgtttggggtgtgccaagactggaagtgggaagacggcagcgtttgtgttgccagtg
ctgcagaaactgtcagaggatccgtatggcatcttctgcctggtgctcactcccaccagg
gagctggcctatcagattgctgagcagtttcgaatcttggggaagcctctgggtctgcgg
gactgcattgttgttggtgggatggacatggtcagtcaggctctggaactttccaaccag
ccgcacgttgtcgtagcgacaccgggacgattggctgatcacatccgcagctccaacact
ttcagcatgagcaagatccagttcctgattttggatgaagcagaccggctgttggagcag
ggctgcactgacttcaccaaagacctggaggtgatcctgggggttataccggccaagcgg
cagacgctgctgttcagcgccacactcaccaacacactgcaggacctgaagaacatcgca
atgaacaaaccgttcttctgggagagcaaatcggagacacgaacagtggaggagctggac
cagaggtacatcctaactccagagaaggtgaaggacgcctacctggtccacctgatccag
acgatcactgacgagcacgacgactggtccgtcatcatcttcaccaacacctgcaagagt
tgtcaaatcctcaccatgatgctgcgggaatttaacttcccaacaatctccttgcactct
atgatgaaacagaaacaacgatttgcaagtctcgccaagttcaaggccagtgtttacaaa
atcctgattgcgacagatgtagctgccaggggtttggatattccaacagtccaggttgtc
attaaccacaacaccccgggtcttcccaagatctacatccacagagtcggacggacggca
agagcagggagaaatggagtgtccatcacactggtgacacagtacgacatccacttggtc
cactccatagaagaacagattcaggcgaagctgaaggaatatcctgtggaggagaaagaa
gtcctgaagatcctcacccaagtcaacgtgaccaggcgagagtgtgaaataaaactggag
tcaacagactttgacgagaagaaggagatcaacaagaggaaacagctgatcctggagggg
aaggatccggacctggaggccaagaggaaggctgagctggagaagatcaggagccagaag
aagaagttcaaactgaaaatccaggagagcattgagaaagagaaacatgggcagctgaaa
aagaaactaaggaagagaaaacagatgaaaaagaaaaaagcagctgaggcaacggcatga
DBGET
integrated database retrieval system
