KEGG   Solea senegalensis (Senegalese sole): 122780731
Entry
122780731         CDS       T07721                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
ssen  Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssen03036]
    122780731 (kdm4b)
Enzymes [BR:ssen01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     122780731 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     122780731 (kdm4b)
Chromosome and associated proteins [BR:ssen03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122780731 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H JmjN PHD_2 PHD DUF4537 Tudor_3 Tudor_5 SLX1_C
Other DBs
NCBI-GeneID: 122780731
NCBI-ProteinID: XP_043899870
LinkDB
Position
LG14:complement(14215020..14255565)
AA seq 1229 aa
MATEIPMDTVSAPPPALASSLDPAPPALSPSAARDQLSSQHPGLAESLQTVVTSECSVAP
DLDATQPADSDVAAGLVPGSELPPAPLLQPPPPATAKNPSCKIMTFRPTMEEFKDFAKYI
AYMETQGAHRAGVAKVIPPEGWKPRRCYDTIEDMVIPAPIMQVVTGQSGLFTQYNIQKKS
MTVSEYRKLANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEDVQEWNIS
RLNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQSKSWYSI
SPEQGKRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYSIPFDRVTQNEGEFIITF
PYGYHAGFNHGFNCAESTNFATLRWVDYGKMATQCSCRKDMVKISMDVFVRCLQPDRYDL
WKQGRDTTIIDHHKTTELTSPELEQWRKHRVTYRENLLRKAMQRMKQFRRLKLEEVKVLA
EQGIALDHADYQRQVEEREAQRRQEREERLAREAMMTLKAMELEEQKAAEAAVKAAETPT
TEGEGDVNMQEPPPLTEDGEKKKQKKPKKMSLIDNAITGFEKEFEQFATSGIMNSDSATV
SHPEVPADNKLEVCYSKVKMPTEVKKSRRHPLSKPPMRSPLSIVKQDLTSDQELSSPMLL
DSTFKKKENPWRNLSPNFLAEKAFNVAVAALQPYCAVCSIFCPYIKPQKDVTIANVAPTT
PPCHGNMTRPLVPEMCFSVGAGNTEPPPTNPHIGEDGTSLLLCCCSCKMQVHASCYGVKP
DSVSDSWICSRCTAGAWTVECCLCNLRGGAFKITVDKRWVHVICAIAVAEARFVNAIERQ
PVDINAVPETRKSLKCMFCHSKSVSQNRGACIQCSYENCATSFHVTCAQIAGVVMKPADW
PYVVSVTCHKHKKVIPPKVTPPKVTTPKVRPAAAKSSPCPNLGQKVIGRNSDSWYYHCTV
IGMATQTFYEVNFDDGSYCDNLQPENIVSHDCLHTGPPEAGEMILVSTNEGQILNASFIK
EHSHKYYQVEFHDQTQLLLKQSEIHFLDQELPKRVRARLAIPASQEVSSPDEAQAAKRRR
LPSDSAPPALTRMETTNPSTCTITSASAHTAKHDRFTTPLTSQPLSGHSMIPQDGAAQAN
GIPVDSGTPMDTSLTLTQAVMGSSLVSDPALTPQMTPFQSALNSDPLLSALSPPPPPQQM
YTPSSGYVSYMETLLNSHFPQDDGPGPLY
NT seq 3690 nt   +upstreamnt  +downstreamnt
atggctaccgagatccctatggacacggtgtcagctcctccccctgccctagcctcttca
ctagaccctgcacctccggctctcagcccaagtgcagctcgagaccagttatctagccag
catccaggattagctgaatcccttcagacagtggtgacctcagaatgcagtgttgctcca
gatctcgatgcaactcagcctgcagactcagatgtggctgcaggacttgttcctggttct
gagcttcccccagcccctctgctgcaaccaccaccaccagccactgccaagaacccaagc
tgcaagattatgacctttcggcccactatggaagagtttaaagactttgcaaaatacata
gcctacatggagacccaaggagctcaccgtgctggtgttgcaaaggtgattcccccagag
ggctggaagccgaggagatgctacgacaccatcgaggacatggtgattccagctcctatc
atgcaggtggtgaccggtcagtctggtctgtttacccaatacaacatccagaagaagtca
atgactgtgagcgagtaccgcaagctggccaacagcaaaaagtactgcacacctcgccac
aaagactttgatgaccttgagaggaaatactggaaaaacctgacatttgtgtcacccata
tacggtgcagatgtcagtggctccatctatgatgaggacgttcaagagtggaacattagc
cgtctcaacacactgttggatatggtggagcaggagtgtggcatcgttattgagggcgtc
aatactccatatctgtattttggcatgtggaagaccacatttgcctggcacactgaggac
atggacctctacagcatcaactacctgcattttggacagtccaaatcctggtattcaatt
tcacccgaacaaggcaagaggctagagaggctggcacaaggattcttccctggcagttcc
caaggctgtgacgccttccttcgccacaagatgacgttgatatcgccatccatccttaaa
aaatacagcattccttttgacagggtaactcagaatgaaggggagtttataatcacattt
ccttatggctatcatgccggcttcaaccacggtttcaactgcgcagagtccacaaacttt
gcaaccctgcgctgggtagactatggcaagatggccacccagtgttcttgtcgtaaggac
atggtgaaaatctctatggacgtgtttgtgcgctgcctgcagcccgatcgctacgacctg
tggaagcagggcagagacactacaataatagatcatcataagaccactgagctcaccagc
cccgaactggagcagtggaggaagcatcgcgtcacataccgagaaaacctcctaagaaag
gccatgcagaggatgaagcagttccgccgtctaaagctggaagaggtgaaagtgctggcg
gagcaaggcattgcgctcgatcatgctgattaccagcgccaagtggaggagcgtgaagcc
cagcggaggcaggagagggaggagcgtctagccagagaggccatgatgaccctgaaggcc
atggagctcgaggagcaaaaggccgctgaggctgctgttaaagcagctgaaactccaacc
acagagggtgagggcgatgtgaacatgcaagaaccaccgcctctgacagaagacggtgaa
aaaaagaagcagaagaagccaaagaagatgtcacttatcgacaatgccatcactggattt
gagaaagaatttgagcagtttgccacatctggcatcatgaattcagacagtgccacggtc
agtcatccagaggtaccagcagacaacaagctggaggtgtgctattccaaggtgaagatg
ccaacagaggtgaaaaaaagtcggcgtcaccccctcagcaaaccgcccatgcgctcccct
ctgtccattgtcaagcaagatctaaccagtgaccaagagctgtcctcacccatgctgctg
gacagcacttttaagaaaaaggagaacccttggcggaatctttcacccaacttcttggca
gagaaagccttcaatgttgcagtggcagcacttcaaccatattgtgctgtctgttcaatc
ttctgtccctacattaagccacaaaaggatgtcaccattgcaaatgtggcgccaaccacc
cctccctgtcatggcaacatgactcgtccactggtcccagagatgtgctttagcgttggg
gcaggaaacacagagcctccacccaccaaccctcacattggagaggatggaaccagtctt
ctactctgctgttgttcttgcaaaatgcaggttcatgctagttgttacggtgtaaagcca
gactcagtcagtgattcctggatatgctccagatgtactgcaggagcctggacagtggag
tgttgtctctgcaacttacgtggaggagctttcaagatcactgttgataagcgctgggtc
catgtcatctgtgcaatcgctgtggctgaagctcgctttgtcaatgccatcgaaaggcag
ccagtggacatcaatgctgttccagaaacacgcaagagtctgaagtgtatgttctgtcac
agtaagagtgtcagtcagaaccgtggcgcctgcatccaatgctcgtatgagaactgtgcc
acctccttccatgtcacctgtgcccaaattgccggtgtagtcatgaaaccagctgactgg
ccctatgtggtgtctgtgacctgtcacaaacataaaaaagtaattcctccaaaagtcact
cctccaaaagtcactactccaaaggtgcgcccagcagcagctaaaagtagcccgtgtcca
aacctaggccagaaagtgattggtcgcaacagtgacagctggtactaccattgtaccgtt
atcggcatggcaacacagacattctacgaggttaactttgacgacggctcgtattgtgac
aatctgcaaccagaaaacatagtaagtcatgactgtctgcataccggtcctcctgaagct
ggggagatgatcttggtcagcacaaatgagggtcagatcctcaatgcgtccttcatcaaa
gagcactctcacaagtactaccaggttgagtttcacgatcagactcagctgctgctcaaa
caatcggagatccactttttggaccaggaactgcctaagagggtccgtgcccgacttgca
atacctgcgtcccaggaggtttcctctcccgacgaagcccaagcagcaaagcgccgccgt
ctgccctctgattcagcccctcccgccctgactcgcatggaaacaaccaatccgtccact
tgcaccataacttcagcctcagcacacacagcaaaacacgacagatttactacaccgctg
acctcacagccactgtccgggcacagcatgataccacaggatggagccgcccaagccaat
ggtattccggtggattctggaaccccaatggacacaagcctcaccctcactcaagctgta
atggggtcatccctggtgtcggaccccgcactgactccacagatgacccccttccagtcc
gcattgaactctgaccccctcctgtcggccctgtcccctcccccgccacctcagcaaatg
tacacaccgagcagtggctacgtttcctacatggagactctcctcaattcacatttccct
caggatgacgggcctggacccctgtattaa

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