KEGG   Solea senegalensis (Senegalese sole): 122780893
Entry
122780893         CDS       T07721                                 
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
  KO
K14315  nucleoporin NDC1
Organism
ssen  Solea senegalensis (Senegalese sole)
Pathway
ssen03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ssen00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122780893 (ndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssen03019]
    122780893 (ndc1)
Messenger RNA biogenesis [BR:ssen03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122780893 (ndc1)
SSDB
Motif
Pfam: Ndc1_Nup HPIH
Other DBs
NCBI-GeneID: 122780893
NCBI-ProteinID: XP_043900210
LinkDB
Position
LG1:complement(41522597..41533002)
AA seq 669 aa
MFSTEQSCWFIRKVICWRAAASIAWAVLLLPPITAVFVILSRFSLLHPIHTISECFSLLM
SASAIFSFILLCGVIIMVGFLNLEYYTVIPTIACSKIAMFGQLLHPRQFVNTLVHCIMGI
IVAWCCAVTIGGRYETLGYPCTQSDGSTQMCLNEYHLILLLAGAFVGFSHSLLGVIYNMN
YVSFTTVQQYKYLRFKGSLPLVVKCSATQALYSIRNYIVVYFFLGHIPRAWICKTLNLHL
NSSIHTLDSIAGLLDLSLLYHMWISATFLLFTWYITLLLFRIFVTEVYSFPVQSSFTEDA
HQCLPKVLSEKQSVIVKFLALQDLALLSQHSPSRRCEVFSLSQPGGHPHNWNSISRECLS
LLADLTQRLVAYHDTVATNGRAKSLSTGSERKSSSGTSVTSGTEEFMSPRPTLLMKTPAS
VFARSIGRGQQSPLTAPFTPELDSPFTSPSLRRLTAPLEQCSPWYGTVQSPHVMRRAPKL
WSASTDSQINGSCPPSPASVPSPQQETSKPSLLTQFLQNRKEQVKNFLAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVVQTTLPSILSCMLGLQEAVDRH
FKLPHASSKPLRWSSSMGDSTYKTLRFALRATLKTAIYRITTTFGDHLNAVQVSTEHQKR
LQQFLEYKE
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgttttcaacagagcaaagttgctggtttatccgcaaggtgatttgctggagagccgca
gctagtattgcctgggccgtgctgttgttgccacccatcacagcagtgtttgtaatcctc
agcaggttcagtcttctccaccccatccataccatatcagaatgcttctccttgctaatg
agtgccagtgccatattctctttcatcctgctgtgtggggtgatcatcatggtgggcttc
ctgaacctggagtattatacagtcatcccaactattgcatgctcaaaaattgccatgttt
ggacaactgctgcaccctcgtcagtttgtcaacaccctggtccattgcatcatgggaata
attgtggcttggtgttgtgctgtcacaatcgggggccgatacgagacgcttggctaccca
tgcacacagagcgatggttcaactcagatgtgtctgaatgagtatcacctcatccttctg
ctcgctggagcctttgttggattttctcacagtctgctgggtgtgatctacaacatgaac
tatgtctcattcaccactgttcagcaatacaaataccttcgcttcaagggatcactgcca
ttagtggtgaaatgcagtgccacacaagcactatactctatcaggaactacattgttgtg
tatttctttttgggacacattccaagagcatggatctgtaaaacactgaatcttcatttg
aacagctccatccacactcttgacagcatagctggactgctggacctctctctgctctac
cacatgtggatcagtgccaccttcctcctctttacatggtacatcacactgctgctcttt
aggatctttgtcactgaggtttacagttttcctgtgcaatcgtcctttaccgaagatgcc
caccagtgtcttcctaaagttctgtctgaaaagcagtcagtgatagtaaagttcctagct
ctgcaggacctggcactgctgtctcaacactctccatcacgacgctgtgaggtcttcagt
ctgagtcagccaggtggccatcctcataactggaactccatcagccgggagtgtctgtcc
ttgttggctgatctgacccagagacttgtagcttatcatgacaccgtggcaaccaatggc
agggccaaatcactgtcgacagggagtgaaaggaaatcttcatctgggacatcagtaaca
tcgggtacagaagagtttatgtctccgaggcccactctgctgatgaaaactccagcttca
gtctttgcccgctccatcggcagaggccaacagagtcctctgactgcaccattcactcca
gagctggacagtcccttcacttcaccatccctgcgacgcctcaccgctccactcgagcag
tgctcaccttggtacggcactgtgcagagcccgcatgtcatgaggagagcaccaaaactc
tggtccgcctccacagattcacagattaatggcagttgcccaccgtcccctgcctcagtt
cccagtccccagcaggaaacctccaaacccagtctcctcactcagttcctccagaacaga
aaagaacaggttaaaaatttcttggcaaagcgggtgctgataatgtatttgtttaacaag
cttccagaggcttccagtcaggctctctttgctgacagccaggctcacatctgggcgtta
gaaggactgtcctatcttgttcaggcctccttctcagaagaccaatttggggttgtacag
actacattacccagcattctcagctgtatgctgggcctacaagaggctgtcgatcgccac
ttcaagctgcctcacgcctccagtaaaccgctcaggtggagcagcagcatgggtgactcc
acttacaaaacactgcgatttgctctcagagccacgctcaagactgccatctacagaata
acaaccacttttggtgatcacttaaatgctgtccaggtgtctacagagcaccagaagaga
ctgcagcagtttctggaatataaggaatga

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