Solea senegalensis (Senegalese sole): 122780893
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Entry
122780893 CDS
T07721
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122780893 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122780893 (ndc1)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122780893 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
HPIH
Motif
Other DBs
NCBI-GeneID:
122780893
NCBI-ProteinID:
XP_043900210
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All DBs
Position
LG1:complement(41522597..41533002)
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AA seq
669 aa
AA seq
DB search
MFSTEQSCWFIRKVICWRAAASIAWAVLLLPPITAVFVILSRFSLLHPIHTISECFSLLM
SASAIFSFILLCGVIIMVGFLNLEYYTVIPTIACSKIAMFGQLLHPRQFVNTLVHCIMGI
IVAWCCAVTIGGRYETLGYPCTQSDGSTQMCLNEYHLILLLAGAFVGFSHSLLGVIYNMN
YVSFTTVQQYKYLRFKGSLPLVVKCSATQALYSIRNYIVVYFFLGHIPRAWICKTLNLHL
NSSIHTLDSIAGLLDLSLLYHMWISATFLLFTWYITLLLFRIFVTEVYSFPVQSSFTEDA
HQCLPKVLSEKQSVIVKFLALQDLALLSQHSPSRRCEVFSLSQPGGHPHNWNSISRECLS
LLADLTQRLVAYHDTVATNGRAKSLSTGSERKSSSGTSVTSGTEEFMSPRPTLLMKTPAS
VFARSIGRGQQSPLTAPFTPELDSPFTSPSLRRLTAPLEQCSPWYGTVQSPHVMRRAPKL
WSASTDSQINGSCPPSPASVPSPQQETSKPSLLTQFLQNRKEQVKNFLAKRVLIMYLFNK
LPEASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVVQTTLPSILSCMLGLQEAVDRH
FKLPHASSKPLRWSSSMGDSTYKTLRFALRATLKTAIYRITTTFGDHLNAVQVSTEHQKR
LQQFLEYKE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaacagagcaaagttgctggtttatccgcaaggtgatttgctggagagccgca
gctagtattgcctgggccgtgctgttgttgccacccatcacagcagtgtttgtaatcctc
agcaggttcagtcttctccaccccatccataccatatcagaatgcttctccttgctaatg
agtgccagtgccatattctctttcatcctgctgtgtggggtgatcatcatggtgggcttc
ctgaacctggagtattatacagtcatcccaactattgcatgctcaaaaattgccatgttt
ggacaactgctgcaccctcgtcagtttgtcaacaccctggtccattgcatcatgggaata
attgtggcttggtgttgtgctgtcacaatcgggggccgatacgagacgcttggctaccca
tgcacacagagcgatggttcaactcagatgtgtctgaatgagtatcacctcatccttctg
ctcgctggagcctttgttggattttctcacagtctgctgggtgtgatctacaacatgaac
tatgtctcattcaccactgttcagcaatacaaataccttcgcttcaagggatcactgcca
ttagtggtgaaatgcagtgccacacaagcactatactctatcaggaactacattgttgtg
tatttctttttgggacacattccaagagcatggatctgtaaaacactgaatcttcatttg
aacagctccatccacactcttgacagcatagctggactgctggacctctctctgctctac
cacatgtggatcagtgccaccttcctcctctttacatggtacatcacactgctgctcttt
aggatctttgtcactgaggtttacagttttcctgtgcaatcgtcctttaccgaagatgcc
caccagtgtcttcctaaagttctgtctgaaaagcagtcagtgatagtaaagttcctagct
ctgcaggacctggcactgctgtctcaacactctccatcacgacgctgtgaggtcttcagt
ctgagtcagccaggtggccatcctcataactggaactccatcagccgggagtgtctgtcc
ttgttggctgatctgacccagagacttgtagcttatcatgacaccgtggcaaccaatggc
agggccaaatcactgtcgacagggagtgaaaggaaatcttcatctgggacatcagtaaca
tcgggtacagaagagtttatgtctccgaggcccactctgctgatgaaaactccagcttca
gtctttgcccgctccatcggcagaggccaacagagtcctctgactgcaccattcactcca
gagctggacagtcccttcacttcaccatccctgcgacgcctcaccgctccactcgagcag
tgctcaccttggtacggcactgtgcagagcccgcatgtcatgaggagagcaccaaaactc
tggtccgcctccacagattcacagattaatggcagttgcccaccgtcccctgcctcagtt
cccagtccccagcaggaaacctccaaacccagtctcctcactcagttcctccagaacaga
aaagaacaggttaaaaatttcttggcaaagcgggtgctgataatgtatttgtttaacaag
cttccagaggcttccagtcaggctctctttgctgacagccaggctcacatctgggcgtta
gaaggactgtcctatcttgttcaggcctccttctcagaagaccaatttggggttgtacag
actacattacccagcattctcagctgtatgctgggcctacaagaggctgtcgatcgccac
ttcaagctgcctcacgcctccagtaaaccgctcaggtggagcagcagcatgggtgactcc
acttacaaaacactgcgatttgctctcagagccacgctcaagactgccatctacagaata
acaaccacttttggtgatcacttaaatgctgtccaggtgtctacagagcaccagaagaga
ctgcagcagtttctggaatataaggaatga
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