Solea senegalensis (Senegalese sole): 122780977
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Entry
122780977 CDS
T07721
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
122780977 (sned1)
Domain-containing proteins not elsewhere classified [BR:
ssen04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
122780977 (sned1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
EGF_CA
fn3
EGF_2
EGF_3
cEGF
SdrD_B
EGF_Teneurin
MAGP
Ig_DSCAM-DSCAML_C
EGF_MSP1_1
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
122780977
NCBI-ProteinID:
XP_043900380
LinkDB
All DBs
Position
LG14:2245820..2283082
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AA seq
1359 aa
AA seq
DB search
MVLVLRALLPCLCTLLSLDLLPGVDPAVPLEDFYPFGQDKGDTQTMAQDDGGSGLVQITV
AFPFFGDKHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGRVFY
RESQEPSMLSRASADVKTYFPDFPSFNATWALISTWHQVTFFGGNSNTPVNTFQVVLITD
GELSFTIFQYNNITWTTGMHASSGGNLAGLGGIAAQAGFNAGDGERYFNIPGSRTADVAN
VEGTTNVGFPGRWVFRIDDAHVEVGGCNNSALVCPHLRPCLNGGQCIDDCIKGNPSFTCS
CLAGFTGRRCQIDVNECASHPCQNGGTCQDQINSFICQCLPGYTGSLCEADIDECKNRPC
LNNGSCVQGAGSFTCVCEAGYTGVLCETDINECESQPCLNGGECIDGVANFTCVCPDAFT
GLLCETELVELQVNSTDAENQTEECLCQNGGVCANISGVCECPSGYTGPYCQFGGYNTVT
QTPCSHTRLCPDGGPCMEYGGTYLCTCQTSGADLDHKDFYPYVQPRSVCDSSPCLNGGYC
YERDGGYTCECKHGYWGKHCEKVRLNTCASGPCRNGGSCKEEAGSYKCVCPYRFTGKHCE
VGKPDPCASSPCLNGGTCFHYIGKYKCECTDDFWGRHCEIRRSSQTATELSCGLPPQVNH
AEVQFISTIPGSVAVYVCHSGFISVPRATHSICGIQGDWSQPPICEEIDECRSQPCLNDG
TCQNQVGSYQCVCNQGFSGNRCQTDINECLSEPCEHGGSCENQPGSYSCHCPQGFKGQNC
ELEQDLCDSSPCLNGGVCRGYRRHYACVCKAGFFGDQCQMLEDPCVLQPCGNRGICRTDR
RGNYNCVCKTGYTGKDCEKDLLPPSGLHVLRVEENEVELRWDEPEPSQSLISGFAVTYAP
LRGGNPRTDYLDRHQSTHVMQGLVPGLLYNISTFSVKRSTNRKDSSRPATALIRTRPRRV
EELQVVNASSSQVWLSWLVQAARHAAVSRVHVSLLPSDGSEARTAVLNTSTTEYSFSSLL
PGQMYTVDVLTQSGVRPDEFPSTSHSAGPLQFWTRPLPPQNLSLSHVTTNSALITWSRHP
RNLPDGFVVNVTRGLNTRSRFLPNGKLGSYTIRELTPGQHYYVVLTSVKNAGQEQMHSIP
QQLAFTTLPSEGRSQRRDRPSATGQGTQVRHTPPPSQPQDLGGTAETENSEEIPRYTELI
DRRGRITAKFTHLPRKAVRHRNKPDPPMRLEKMEETTNKISLALEIQEEGLRTKQPELPQ
DCRSLPCQNGGSCVNEGDAYVCNCTVGFKGRQCELSCQRVSHPCTRIYSETKSIPVWEDG
VCHYLYKRTYKVQQDVCYREVCEPVLPKKSQTRRTHRQQ
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtgctgcgagccctgctgccctgcctctgcaccctgctctccctggacctg
ctgcctggggtggaccccgctgtgcccctggaggacttctacccctttggccaggacaag
ggggacacccagaccatggctcaggatgacggaggctccgggctggtgcagatcaccgtc
gcgttccccttctttggagacaagcacacaggactctacgtcaacaacaacggccttgta
tctttcctgagggaggtgtctcaattcacaccagtagcttttccaatcgctggggacagg
agggtggtagcgccgttctgggctgatgtggacaaccgtcgggcggggagagttttctac
agagagagccaggagccttccatgttgagcagggcctcagcggatgtcaagacctacttt
ccagacttccccagtttcaacgccacatgggccctcatctccacgtggcaccaagttacg
ttctttggaggcaactccaacacaccggtcaatactttccaagtggtgctcattacagat
ggagagctttccttcactatattccagtacaataatatcacatggaccacaggcatgcat
gccagcagtggtggaaacctggcgggactgggaggcatcgcagcgcaggcaggtttcaac
gctggtgacggcgagcgttacttcaacatccccggctctcgcacggctgatgtggccaac
gtggagggaaccaccaacgtgggcttcccgggcagatgggtgttccgcatagacgatgca
cacgtagaagtgggtggctgcaataactctgcattagtgtgtccgcacctgcgaccctgt
ctgaacggaggccagtgcatcgacgactgtattaaaggaaacccctccttcacttgctcc
tgcttggccggcttcaccggacgaagatgtcagatcgatgtgaatgaatgtgcctcacat
ccttgccagaacggaggaacttgtcaagaccagattaacagtttcatctgtcagtgtctt
cctggatacaccgggagtctgtgtgaagcagacattgacgagtgcaaaaacaggccgtgc
ctcaacaacggctcgtgtgtacaaggtgctggcagtttcacctgtgtgtgtgaagcgggt
tacactggcgtgctgtgtgagacagacataaacgaatgtgagtcgcagccttgtctgaat
ggaggagaatgcatcgatggagtggccaactttacctgtgtttgtccggatgccttcact
ggactcctctgcgagacagaactggtggagcttcaagtgaattcaactgatgcagaaaac
caaacagaggaatgtctttgtcagaatgggggcgtctgtgcgaacatcagcggagtgtgt
gaatgtccttcaggctacacaggaccctactgtcagtttggtgggtataatacagtaacc
cagacgccgtgcagccacaccaggctgtgtcctgatggcggtccttgtatggagtacgga
ggaacctacctgtgtacatgtcagaccagcggagcagatctggatcataaagacttttac
ccctatgtacagccccgatcggtctgcgactcgtctccatgtctgaatggaggctactgc
tacgagcgggacggaggctacacctgcgagtgcaaacacggatactgggggaagcactgt
gagaaagttagactcaatacctgcgcctccggtccctgccgcaatggaggctcctgcaag
gaggaggcggggagctacaaatgcgtgtgtccgtacaggttcactgggaaacactgtgaa
gtgggaaaacccgacccctgtgcgtccagcccctgcctcaatggtggaacatgttttcat
tacataggaaagtataaatgtgaatgcactgatgacttctggggcagacactgtgaaata
cgcagatcgtcacaaacagcgacagagctgagctgtgggctgcccccacaagtgaatcac
gccgaggtccagttcatctcaactataccgggctccgtggctgtgtacgtctgccactca
ggcttcatatctgtgccccgagccacacacagcatctgtggtatccagggagactggagt
cagccacctatttgtgaggagatcgacgagtgtcggtcacagccttgtcttaatgacggc
acgtgtcagaaccaggtcggctcctaccagtgtgtgtgtaatcagggcttcagtggaaat
cgctgtcaaacagacatcaatgaatgcctgtcagaaccctgtgaacacgggggatcatgt
gaaaaccagcctggttcctactcgtgccactgtccacaaggcttcaaaggccagaactgt
gaattagagcaggacctgtgtgactccagcccctgcctgaatggaggcgtgtgtcgaggt
tacaggcgacattatgcatgtgtgtgcaaagctgggttttttggcgaccagtgccagatg
ttggaagacccgtgtgtactgcaaccttgtggaaacaggggcatctgcaggaccgacagg
agaggaaactacaactgcgtttgcaaaacaggatacacgggcaaagactgtgagaaagac
ctgttgcctccctctggtctccatgtgctgcgtgtggaggagaacgaggtggagctgcgc
tgggatgagccggagccttcgcaaagcctcatcagcggcttcgccgtcacctacgctccg
ctgcgagggggaaaccccagaactgactacctggacaggcatcagtccactcacgtgatg
caaggcctggtgcccggcctgctgtacaacatctccaccttctccgtcaaacgcagcacc
aacaggaaggactccagccgacctgccaccgcactaatacgaaccagacctcggcgggtg
gaggagctgcaggtggtcaacgcgtcgtcctctcaggtttggctgagttggctggtgcag
gcggctcgtcacgccgccgtcagcagggtgcacgtgtcgctgctgccttcagacggcagt
gaagctcgcactgcggtgctcaacaccagcaccacagagtacagcttcagctcactactt
cctggtcagatgtacacagtggacgtgttgactcagagtggagtcagaccagatgagttt
ccctccaccagtcactcagctggacctctgcaattctggacaaggcctctccccccacag
aacctctccctgtcacatgtcaccactaactcagccctgatcacctggagccgccacccg
agaaacctcccagatggctttgtggtcaacgtgacccgagggttgaataccaggagtcgc
ttcctgcccaatgggaagttaggatcatataccatccgtgaactgacaccgggacagcac
tactatgtggttctcacgtccgtcaaaaacgcagggcaggagcagatgcacagcatacct
cagcaattagccttcactaccttaccgtcggagggcagatcgcagaggagagacaggccg
tcagcgaccggacagggaactcaggtccgacacacacctccaccgtctcagcctcaggac
ctgggaggcacagcggaaacagaaaactcagaggaaattcccagatacacagaactcatt
gacaggaggggaaggataacagcgaagttcactcacttaccccgaaaagctgtccgacat
cggaacaagcccgatccaccaatgagattagagaagatggaggaaacgacaaacaaaatc
agcctcgcactggagattcaagaggaaggtttaaggacgaagcagcctgagttgccccag
gactgccgcagtctgccgtgtcagaacgggggttcatgtgtgaacgaaggtgacgcctac
gtctgcaactgcaccgtggggttcaagggcagacagtgtgaactgtcgtgccagcgagta
tcacacccatgtacccgaatctactctgaaacgaagagcatacctgtctgggaggatgga
gtgtgccactacctgtacaaaagaacatataaagtgcagcaggacgtctgttaccgagag
gtctgtgaaccagtgcttcccaagaaaagtcagaccagaagaacgcacagacaacaataa
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