Solea senegalensis (Senegalese sole): 122780984
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Entry
122780984 CDS
T07721
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssen03037
]
122780984
Cilium and associated proteins [BR:
ssen03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
122780984
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_8
TPR_19
TPR_14
TPR_7
TPR_6
TPR_11
TPR_16
TPR_17
ANAPC3
TPR_CcmH_CycH
TPR_9
ARM_TT21_5th
DUF2225
TPR_15
ARM_TT21_N
Coatomer_E
ARM_TT21_C
ARM_TT21_4th
TPR_MalT
DUF6584
ARM_TT21_2nd
HEAT_Nup120
DUF2989
HAT_PRP39_C
Consortin_N
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
122780984
NCBI-ProteinID:
XP_043900389
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All DBs
Position
LG14:complement(629588..631726)
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AA seq
712 aa
AA seq
DB search
MSSNKITFEFPGPGIEARPLASSLGSWNHTTSPMGRPMTEVVQARAVTLGYRSSLTYGSS
VDLLGQSRSRFPSIESNSEDMTEEIIILEKKVKDLIEESCMAKSTGDLQLALEKAKESGR
NERVLANLREESGSWNINVVLTCSVLLNLANQYENNEMYTEALNTYQLIVKDKRFINGGI
LRVNMANIYFKKKNYTKAIKFYQMALDTISNDHKIMRMKIMQNIAMVFVHIGQYSGAITS
LEHIMTESPNIRTGFNLVLCFYAIGDSERMKKAFQNLISVPLGIINKDKFIPSDDDNSAN
TAIEGTKKDKLHHMERNVNALALKYIITAAKLIAPVIETSLATGLDWCMDLVKSSQYSEA
ANDLEITKIINSLRKKDFNLHVVVETLKTLVRKDSSVKIAAATNLSSLYFLKTDYEQAKQ
YSDSAMNADSTNPTVLVNKGNTEFVKQEYKKATEFYKEALRSDSSSTEALYNLGLSNKKL
NCLEESLDCFLKLHAILRNNAQVMYQLAHLYELLENPKEAIKWLMQVISLTPTDPKVLAK
LGELYDHEGDMPQALQYYYESFRCFPSNIDVIKWLGTYYYKNQFFEKAIQHFQRASLIEP
THVQWQLLVASCYRKSGNYQKALDKYRDIHHRFPQNVQCLHFLVRLCADMKLKEGREYTT
TLKKVVKMKETRELLKGSTENSLMGRPKMGAKKRAEDVTFTDLELRDDLLPE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaacaaaataacttttgaattccctggccctggtattgaagctaggccttta
gcttcttcactgggttcctggaaccatacaacctccccaatgggcagacctatgactgaa
gttgtgcaggctagagctgtaacccttggttacaggtcctccctgacctatggatcatcc
gttgatcttctaggccagtccagaagtcgtttcccttcaatagaatcaaatagtgaggac
atgactgaggagatcataatcctggaaaagaaagtgaaagacctgatagaagaaagctgt
atggcaaagagtaccggagacttacaactggctcttgaaaaagccaaagagtcagggagg
aacgagagagtgctggcaaatctaagggaagagtcaggcagttggaacattaacgtagtc
cttacctgctcagttttgctcaatcttgccaaccagtacgagaacaatgaaatgtacaca
gaggctctaaacacctaccagctcattgtgaaggacaagaggtttattaatgggggaatt
cttagagtcaacatggcaaatatctacttcaaaaagaaaaactataccaaagcaattaag
ttctaccaaatggcactagatacaatttccaatgatcacaagattatgaggatgaagatc
atgcagaatattgccatggtctttgttcacataggccaatattcaggtgccataacgtca
cttgaacacataatgactgagagccccaatatcaggacaggcttcaaccttgtcctatgc
ttctacgccattggtgactcggagaggatgaagaaggcctttcagaacctcatttcagtt
cctcttggcatcattaacaaagataagttcattccatctgatgacgataacagtgcaaat
acagcaattgagggaactaagaaagacaaacttcaccacatggagagaaatgtaaatgcc
ctggctcttaagtatatcataactgcagctaagctcattgctccagttattgagacttct
ttagcaactggtttagactggtgtatggacttggtgaagagttctcagtattctgaggca
gccaatgatctggagatcaccaagatcattaactctcttagaaagaaggactttaaccta
catgtggtagttgaaaccctgaaaacattagtgaggaaggacagcagcgtgaagattgca
gctgccaccaacctctcttccctttatttcctgaagactgactatgaacaggctaagcaa
tattctgattctgccatgaatgctgatagcactaacccaacagtgcttgtcaacaagggc
aacacagagtttgtcaagcaggagtataaaaaggccacagaattctacaaagaagcattg
agaagtgattcctctagtactgaggccctctataatctgggtctatccaataagaaactg
aattgtttggaggagtctctggactgctttctgaagcttcatgccattctgaggaacaat
gcccaagttatgtaccagctggcccacctttatgaacttcttgagaatcccaaagaggca
atcaagtggttgatgcaggtcatcagtctaactcccactgaccccaaagtgctggccaaa
ctgggagagctgtatgatcatgagggggacatgccccaggctttacaatattactatgag
tctttcagatgtttcccttccaacattgatgtgatcaagtggcttggaacctactactac
aagaatcagttctttgaaaaagctattcagcactttcaaagagcttctctcatcgaacca
acgcatgtgcagtggcagcttttggtggcaagctgctacagaaaaagtggaaactaccaa
aaagcattggacaaatatagagacatccaccacaggtttccacagaatgtacaatgtctg
catttcctggtgaggctatgtgcagacatgaaattaaaggaaggcagagaatacaccacc
acgctaaaaaaggtggtgaagatgaaggagaccagagaattgctaaagggcagtactgag
aacagcctgatggggagaccaaagatgggagccaagaagcgtgcagaagatgtcaccttc
acagatttagagctgagagatgacctccttccagagtag
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