Solea senegalensis (Senegalese sole): 122780988
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Entry
122780988 CDS
T07721
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122780988 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122780988 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
ssen04131
]
122780988 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
ssen03029
]
122780988 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssen04812
]
122780988 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122780988 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
122780988 (si:dkey-110c1.10)
Membrane trafficking [BR:
ssen04131
]
Others
Actin-binding proteins
Myosins
122780988 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
ssen03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122780988 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
ssen04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122780988 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
IQ
DIL
nSTAND3
AAA_22
Myosin_N
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
122780988
NCBI-ProteinID:
XP_043900394
LinkDB
All DBs
Position
LG14:5922731..5936975
Genome browser
AA seq
1535 aa
AA seq
DB search
MATLELYSKGASVWIPDPDAVWVSAQLLQDYTPGVKHLQLQLSNGKEVHCAVGSPSDLPP
LGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDQLHIYGE
EVIDAYSGQDMAEMEPHIFSVAEEAYRTMTREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGAKMRT
YLLEKSRVVFQASSERNYHIFYQLCASRELPEMRALKLDAPEHFYYTNQGGEMLIPGTDD
ASDLERTRNAFTILGVQPDQQMELFRILSAVLHLGNVNIQSSGRNSDKSYIDTGDRSLAV
FSKLLGVEGPQMAHWLCHRRLAVGGEMLVKPRSGQQAVEARDALAKHIYGQLFSWTVHRL
NSALRSQSGKTKSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFHLEQEEYI
REELAWSRIEFSDNQPCINLIEGQLGLLDLLDEECRMPKGSAESWVQKLYDQHLSSRPHP
HFQKPRMSNTAFIILHFADTVQYECDGFLDKNRDTVFEELVNILKASQSELVAELFQQQE
NATSAVANGSVRSGKRSTREHKLTVGFQFRQSLQMLMDTLNSTTPHYVRCIKPNDLKQPF
LFDPKRIVQQLRACGVLETIRISAAGFPSRWTYEEFFSRYRVLLRGSQSQQEAQALCRGT
LPQVITDPDQYCFGKTKVFFRAGQVALLERLRGERLHVAAVSIQSRVRGWLSRIRYNKIL
RATVTIQRYSRGALARRLALTVRYTKAALVIQKTFRMVMVRQLFLLIRQATITIQAFTRG
TLARCRCRLLVAERCAVLLQARVRGWLARKEYVRVRAAVVFMQCCVRRRAARKQLLKLKT
EARSVEKYRELNKGMEVKLMQLQLRADQAVRESAALRENQCAERVAFNAELEALRVKIQK
LESQKHEQSQPCSDINEKEEEKRRRAEEKAGQEILQLTQELQTLQKEKDSFHKEREELSA
QLLEQEKAQEECVNQAVTQASAALTAALDEERRRYQCLLREYTRLEQRYDNLREMSLLTK
NPKGHTRTDSSQSLCPEPLSPSPSMLSLQSLTPLSLSPVPSALPSPEEVRRASVTSPRFV
RSFSVGSQETPMDQLMEKMNVSKDPTVKMRGEDLAHAYDAVRVANKFLESQLRKQRSQCE
EETEALRNQLTQAVSASSSTAQQQSQQELLEAREQECVRLRRELKELRSTSSLRQLLTQT
LIPDVQSLSSSLSSSRPKAAAVSGLLECRRRDETKLIKNLITDIRVDSALTLPPGLPASV
LFLCVRQADCSRDQSQVHLLCSAAVTAMKAALKKHGNNVDMTALWLKNACVMHDLLTQHS
QTLDSDKVIPLTTDLSDPIHTLSNLRIQAYQQLLSITETRLQNVIVPALLESETIPGLSG
SAVKLASSRRRSGSDPRTLAGVAHTMTLMLRELETLYSTMSCQALPSTLMGQAFHQLTYF
ISASGLNNLLLRKDMCCWSRGMQIRYQYTPTNVSL
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggcaacactagaactatacagcaagggagcgagtgtgtggattcctgacccagatgca
gtctgggtttcagcccagctcctccaggactacactcctggagtgaaacatctgcagctt
cagctctctaatggaaaggaggttcattgcgcagtgggctctccctctgatctcccacca
ctggggaatcctgacatcctggagggggaaaatgatctcacagctctcagcttcctccat
gagccggctgtcctgcacaacctgcgggttcggttcctggactacagcagcatttacacc
tactgtggtattgttttagtggccatcaacccctacgaccagctccacatatatggcgag
gaggtgatcgacgcctacagtggtcaggacatggctgaaatggaacctcacatcttctca
gtggcagaggaagcttaccgcactatgaccagagaggagaagaaccagtccatcatcatc
agtggagagtccggctcgggtaaaactgtctctgccaaattcaccatgcgatactttgct
gtggtcggaggagcagcacagcagaccagtgtggaggagagagttctcgcttcaaacccc
atcatggagtctattgggaacgctaaaactacccgaaatgacaacagcagtcgttttggg
aaatacattgagattggctttggcagaaagggcgacatcattggagcaaaaatgaggaca
taccttctcgagaagtcaagagttgtcttccaggcctcatcagagagaaactaccatatc
ttctatcagctgtgtgcctccagagagcttcctgagatgagagcactcaaactggatgca
cctgagcatttctactacaccaaccagggaggagagatgctgatacctggcactgatgat
gcgtcagacctggagcgcactcgcaatgcttttaccattctgggtgtgcagcctgaccag
cagatggagcttttcaggatcctttcagctgttcttcacttgggaaatgtcaacatccaa
tccagtgggagaaactcagataagagttacattgatacaggtgaccgctctctggctgtc
ttttccaaactacttggagttgaaggaccacagatggctcactggctgtgtcaccgcaga
ttggcagtagggggagagatgctggtcaaacccaggtctgggcagcaggctgtagaggcc
agagatgctctggctaaacacatctatggtcagttgttttcgtggactgtgcacaggctc
aactctgcactccgctcccagagtggaaagacaaaatcctttattggggtgctggatatt
tatggatttgagacctttgatcggaacagttttgagcagttctgtataaattatgcaaat
gaaaagctccagcagcagttcaacaggcatgtgttccacttggagcaggaggagtatata
cgagaggaactggcctggagcaggattgagttcagtgacaatcagccgtgcatcaacctc
atagaaggacaactggggctgttagatctgttagatgaagaatgcaggatgcctaaaggc
tcagctgagagctgggtgcaaaagctgtacgaccagcacctgagcagcagacctcaccct
cacttccagaaacctcgcatgtcaaacacggctttcatcattctgcactttgctgacacg
gttcagtatgaatgtgatggctttttagacaagaatcgagacacagtctttgaggagctc
gtcaacattctgaaagcaagtcagtctgagcttgtggctgagttgtttcagcagcaggag
aatgcgacatctgctgtggccaatggaagcgttcgctcagggaaaagatccaccagagaa
cacaaactcaccgtgggcttccagttccgtcagtccttacagatgctgatggacaccctg
aacagcaccactcctcactatgtccgctgcattaaacccaatgatctcaaacagccattt
ttatttgaccccaagaggatagtccaacagctgagagcgtgtggagtgttggagactatt
cgtatcagtgctgcaggttttccatccaggtggacatatgaggaattcttcagcaggtac
cgtgttcttctccgagggtctcagagtcaacaagaggcccaggccttgtgcagagggact
ctgcctcaggtcatcaccgacccggaccagtactgctttgggaaaactaaagtatttttc
agagccggtcaggtggctctcctagagagactgagaggcgagaggctacatgtggctgca
gtgagcatccagagccgggtcagaggatggctgtcacggatcagatacaacaaaatcctc
cgggcaactgtcaccatacagagatacagcagaggagctttggccagacgactggccctg
accgtgcgctacaccaaggctgcattagtgatccagaagaccttccgcatggtgatggtc
agacagttgttcctcttgattcgtcaggcaactatcaccatccaggccttcactcgggga
acactggcgcgttgcagatgcagactgctggtggcagagcgttgtgcagtgttgcttcag
gcaagagtgcgtggctggttggcgaggaaggaatacgtgcgagtgcgtgcggccgtggtt
ttcatgcagtgctgcgtgcgccgcagagctgccaggaaacaactgctgaaactaaagaca
gaggctcgctcagtggagaaatacagggagctcaacaagggcatggaagtgaaactgatg
cagctgcagttacgagcagatcaggcggtcagagagagcgctgctttgagagagaaccag
tgtgcagagcgagtggccttcaatgctgagctggaggctctgagggtgaagattcagaaa
ctggagagtcaaaaacacgagcaatcccagccatgctcagacatcaatgagaaggaagag
gagaaaaggaggagagctgaggaaaaagctgggcaggagattcttcaactcacacaagag
ttgcagaccctgcagaaagaaaaggacagttttcacaaagagagagaggaactctctgct
cagttacttgaacaagaaaaagcacaagaagagtgtgtgaatcaggctgtgactcaggca
agtgcagctctgacggcggcgctggacgaagagaggcgaaggtaccagtgtctcctgagg
gagtacaccaggctggagcagagatatgacaacctcagagagatgagtcttctcaccaag
aaccccaaaggccacacaaggacagactcctcccagagtctgtgcccggagcctctctct
ccctcaccttccatgctgtcactccagtctctcactcctctctccctgtcacccgtccca
tctgctttgccttctccggaggaggtgcggagggccagcgtaacgtctccacgctttgtg
aggagcttctcagtggggagccaagaaacaccgatggaccagttaatggagaagatgaat
gtgtccaaagaccccacagtgaagatgagaggcgaggacctggctcatgcctacgacgcc
gtgcgagtggccaacaagtttctggagagtcagttgcgtaagcagcgcagccagtgcgag
gaggagacggaggctctgaggaaccagctcacacaggcagtgtctgcttcctcctccact
gcacagcagcagtctcagcaggagcttctagaggccagagagcaggagtgtgtcaggctg
aggagagaactgaaggagctcaggagcacatcgtcactcagacaacttctcacccaaact
ttgatcccagacgttcaatctctgtcgtcatccttgtcctcgtctcgaccaaaggcagca
gcagtctctggtttgctggaatgtaggaggagagatgaaacaaagttaatcaagaacctc
atcacagacatccgcgttgacagcgccctgactctgcctcctggtcttcctgccagcgtg
cttttcctgtgtgtccgccaggctgactgcagcagagaccaaagtcaggttcacttgctc
tgtagcgccgctgtcactgcaatgaaggcagctcttaagaaacatggcaacaacgtagac
atgacagctctgtggctgaaaaacgcttgtgtgatgcacgacctgttgactcagcattcc
cagacccttgactcagacaaagtgattccactgacgactgacctgagtgacccgattcac
accctgagtaaccttcgtatccaggcttatcagcagctcctctccatcacagagacgcgc
ctgcagaacgtcatagttcctgccctgttagagtctgaaaccatcccaggtctgtctggc
tcagcggtgaagttggcatcatccaggaggcgttcaggctcggatcccaggacactggct
ggtgttgctcacacaatgacattgatgttgagggagttggaaaccctttactccaccatg
tcctgccaggctctgccctccacactgatggggcaggcctttcaccagctcacctacttc
atctctgcctcaggtctcaacaacctgctgctgcggaaagacatgtgctgctggagtcgt
ggcatgcaaatacggtatcaatacacaccgaccaatgtcagtctttag
DBGET
integrated database retrieval system
